Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 3.8e-106 388.3 206 100.0
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 1.2e-43 180.6 204 58.8
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.7e-37 160.2 197 50.3
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 9.1e-36 154.5 189 50.3
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.3e-34 149.8 192 49.0
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 5.0e-34 148.7 188 48.9
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 1.9e-33 146.7 188 51.6
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.5e-33 146.4 200 48.0
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 7.2e-33 144.8 195 49.2
Haze_07172 Corylus avellana HOM05D007269 ORTHO05D008531 9.5e-33 144.4 166 58.4
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 2.8e-32 142.9 159 59.1
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 6.8e-31 138.3 191 46.6
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 6.3e-29 131.7 182 47.8
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 6.3e-29 131.7 198 46.0
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 1.8e-28 130.2 196 45.4
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.6e-24 117.1 235 37.0
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.6e-24 117.1 223 40.4
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.8e-24 116.3 196 39.3
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 3.6e-24 115.9 209 41.1
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.0e-23 114.4 215 40.5
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 5.2e-23 112.1 216 40.3
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.2e-23 112.1 218 39.0
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.2e-23 112.1 216 40.3
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.2e-23 112.1 216 40.3
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 8.9e-23 111.3 210 39.0
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 8.9e-23 111.3 221 39.8
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.6e-22 109.8 151 51.0
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 4.4e-22 109.0 201 36.8
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 5.8e-22 108.6 201 39.8
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 9.8e-22 107.8 206 35.4
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 9.8e-22 107.8 198 37.9
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.3e-21 107.5 193 40.9
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.2e-21 106.7 210 40.0
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 2.2e-21 106.7 204 38.7
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.9e-21 106.3 184 42.4
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.9e-21 106.3 193 40.4
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 4.1e-20 102.4 228 36.4
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 7.0e-20 101.7 197 40.1
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 1.2e-19 100.9 203 39.4
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 2.0e-19 100.1 202 38.1
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 7.8e-19 98.2 212 42.0
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 7.8e-19 98.2 235 36.6
Cpa.g.sc4.165 Carica papaya HOM05D007269 ORTHO05D008531 1.0e-18 97.8 198 38.4
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 3.0e-18 96.3 193 37.3
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 6.6e-18 95.1 239 36.0
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 1.1e-17 94.4 220 35.9
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 1.9e-17 93.6 228 36.4
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 5.6e-17 92.0 220 38.2
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 8.0e-16 88.2 220 35.5
Rhsim12G0177300 Rhododendron simsii HOM05D007269 ORTHO05D008531 8.0e-16 88.2 243 34.6
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 2.3e-15 86.7 224 31.7
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 2.3e-15 86.7 234 35.9
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 4.0e-15 85.9 232 31.5
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 5.2e-15 85.5 205 34.6
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 6.8e-15 85.1 218 32.6
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 8.9e-15 84.7 204 36.3
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 2.0e-14 83.6 191 35.1
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 3.4e-14 82.8 194 35.1
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 3.4e-14 82.8 194 35.1
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.4e-14 82.4 244 30.3
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 5.8e-14 82.0 238 31.5
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 5.8e-14 82.0 215 30.2
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 7.5e-14 81.6 166 39.8
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.9e-13 79.7 210 32.4
VMungo0251G2992 Vigna mungo HOM05D031312 ORTHO05D008531 2.9e-13 79.7 158 38.0
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 4.9e-13 79.0 212 33.0
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 6.4e-13 78.6 234 34.6
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 1.4e-12 77.4 213 33.8
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 2.4e-12 76.6 237 30.4
Medtr8g096640 Medicago truncatula HOM05D007269 ORTHO05D008531 4.1e-12 75.9 210 31.9
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 4.1e-12 75.9 209 33.0
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 5.4e-12 75.5 230 36.5
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 9.2e-12 74.7 243 32.1
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 9.2e-12 74.7 197 33.5
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.2e-11 74.3 246 31.3
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 1.6e-11 73.9 242 35.5
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 2.0e-11 73.6 249 32.1
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 7.8e-11 71.6 272 28.3
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.7e-10 70.5 195 34.9
TPR.G28777 Trifolium pratense HOM05D007269 ORTHO05D008531 1.7e-10 70.5 208 32.2
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.0e-10 69.7 232 31.9
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 3.0e-10 69.7 137 38.7
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 6.6e-10 68.6 247 32.0
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.9e-09 67.0 221 30.3
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 5.6e-09 65.5 230 33.0
FAN15G2538 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.6e-09 65.5 159 36.5
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 7.3e-09 65.1 103 38.8
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 4.7e-08 62.4 233 30.5
MELO3C002374.2 Cucumis melo HOM05D001095 ORTHO05D000976 6.2e-08 62.0 207 34.3
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 1.8e-07 60.5 164 34.8
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.8e-07 60.5 127 42.5
CsaV3_1G009800 Cucumis sativus L. HOM05D001095 ORTHO05D000976 6.8e-07 58.5 127 38.6
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 1.2e-06 57.8 194 27.3
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.0e-06 57.0 147 38.8
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 2.6e-06 56.6 203 30.5
Carub.0008s1071 Capsella rubella HOM05D012271 ORTHO05D014413 3.4e-06 56.2 176 30.1
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 7.5e-06 55.1 147 40.1


User provided reference genes

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