Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.11G003100 Carya illinoinensis HOM05D019578 ORTHO05D013050 2.0e-98 362.8 243 100.0
CiPaw.12G002700 Carya illinoinensis HOM05D019578 ORTHO05D013050 1.4e-30 137.5 242 61.2
Cfa018780 Carpinus fangiana HOM05D019578 ORTHO05D013050 7.5e-21 105.1 243 44.0
MELO3C026179.2 Cucumis melo HOM05D029436 ORTHO05D013050 8.9e-14 81.6 118 46.6
ClCG06G018170 Citrullus lanatus HOM05D029436 ORTHO05D013050 2.0e-13 80.5 115 47.8
Haze_07156 Corylus avellana HOM05D019578 ORTHO05D013050 2.0e-13 80.5 241 49.8
PGR083G1848 Punica granatum HOM05D012859 ORTHO05D011228 2.0e-13 80.5 118 44.9
QL10p001707 Quercus lobata HOM05D019578 ORTHO05D013050 6.0e-10 68.9 108 42.6
TWI39G0483 Tripterygium wilfordii HOM05D012859 ORTHO05D011228 5.0e-09 65.9 105 41.0
Thecc.03G136200 Theobroma cacao HOM05D022589 ORTHO05D025168 6.6e-09 65.5 108 37.0
MD06G1135600 Malus domestica HOM05D015491 ORTHO05D013050 8.6e-09 65.1 118 39.0
Cpa.g.sc4.137 Carica papaya HOM05D012859 ORTHO05D011228 1.1e-08 64.7 109 39.4
Prupe.5G146000 Prunus persica HOM05D015491 ORTHO05D013050 1.9e-08 63.9 117 39.3
MD14G1150800 Malus domestica HOM05D015491 ORTHO05D013050 3.3e-08 63.2 254 29.5
QL05p049358 Quercus lobata HOM05D019578 ORTHO05D013050 3.3e-08 63.2 274 36.1
Potri.012G103600 Populus trichocarpa HOM05D012859 ORTHO05D011228 4.3e-08 62.8 106 45.3
Manes.11G109000 Manihot esculenta HOM05D012859 ORTHO05D011228 7.3e-08 62.0 119 41.2
Atru.chr6.1883 Acer truncatum HOM05D012859 ORTHO05D011228 2.1e-07 60.5 118 39.0
Lj4g0027580 Lotus japonicus HOM05D011486 ORTHO05D013306 8.0e-07 58.5 124 36.3
Glyma.05G202200 Glycine max HOM05D011486 ORTHO05D013306 1.1e-06 58.2 112 35.7
CsaV3_1G000250 Cucumis sativus L. HOM05D029436 ORTHO05D013050 2.3e-06 57.0 82 50.0
RcHm_v2.0_Chr7g0189271 Rosa chinensis HOM05D015491 ORTHO05D013050 4.0e-06 56.2 123 38.2
Rhsim08G0194400 Rhododendron simsii HOM05D012859 ORTHO05D015785 8.9e-06 55.1 111 36.9


User provided reference genes

Program Settings