Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 2.3e-251 871.7 428 100.0
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 6.8e-219 763.8 430 86.0
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 8.4e-217 756.9 434 84.8
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.3e-209 733.0 428 81.8
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 4.9e-209 731.1 428 83.6
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 6.0e-207 724.2 433 82.9
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 1.6e-204 716.1 428 80.6
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 3.1e-203 711.8 431 80.0
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 3.1e-203 711.8 428 80.6
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 5.3e-203 711.1 428 80.8
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 6.9e-203 710.7 428 80.6
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 9.0e-203 710.3 430 80.0
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.9e-202 706.8 428 80.1
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 9.9e-202 706.8 428 80.1
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 7.1e-200 700.7 426 75.8
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 9.3e-200 700.3 428 77.3
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 2.1e-199 699.1 428 77.8
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 4.6e-199 698.0 433 78.5
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.8e-198 696.0 429 79.7
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 3.3e-197 691.8 429 79.3
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.6e-196 689.5 430 78.6
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 2.1e-196 689.1 424 78.1
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.2e-196 687.6 428 75.2
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 1.1e-195 686.8 432 76.6
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.1e-195 686.8 429 74.8
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.8e-195 686.0 429 77.9
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 3.1e-195 685.3 428 76.9
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 5.8e-194 681.0 431 75.9
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 1.7e-193 679.5 428 76.9
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 2.2e-193 679.1 430 77.7
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 8.4e-193 677.2 428 76.9
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 1.9e-192 676.0 428 74.5
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 4.6e-191 671.4 428 75.0
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 5.1e-190 667.9 429 76.0
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.9e-189 666.0 429 73.4
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.9e-189 666.0 429 76.2
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 7.4e-189 664.1 434 75.8
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 1.6e-188 662.9 431 75.2
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 8.2e-188 660.6 430 75.6
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.8e-187 659.4 430 76.0
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 4.5e-186 654.8 429 74.8
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 2.9e-185 652.1 430 74.7
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 5.5e-184 647.9 428 73.6
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.2e-183 646.7 428 72.9
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 4.6e-183 644.8 428 73.1
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 7.9e-183 644.0 430 74.7
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 4.3e-181 638.3 429 71.8
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 4.3e-181 638.3 435 71.5
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 9.7e-181 637.1 406 78.1
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 5.3e-179 631.3 428 70.6
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 1.2e-178 630.2 433 70.9
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 2.0e-178 629.4 429 71.6
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 5.9e-178 627.9 454 70.3
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.7e-177 626.3 424 70.8
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 2.2e-177 625.9 433 70.7
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.9e-177 625.5 434 70.5
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 2.9e-177 625.5 433 70.4
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 1.4e-176 623.2 430 72.1
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 3.0e-174 615.5 438 69.9
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 8.2e-172 607.4 422 73.9
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.1e-171 607.1 445 66.3
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 1.1e-171 607.1 429 68.1
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 3.1e-171 605.5 436 71.1
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.2e-170 603.6 430 70.9
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.5e-170 603.2 433 68.6
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 2.2e-169 599.4 430 68.1
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.6e-167 593.2 428 67.3
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 2.6e-165 585.9 410 73.9
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 5.7e-165 584.7 433 67.2
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 3.1e-163 578.9 428 62.9
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 4.1e-163 578.6 428 65.4
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 5.3e-163 578.2 397 71.0
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 7.0e-163 577.8 429 64.3
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 9.1e-163 577.4 428 62.6
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 3.5e-162 575.5 351 77.5
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.3e-161 573.5 431 63.3
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 1.7e-161 573.2 384 74.2
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.9e-160 569.7 428 62.6
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 3.2e-160 568.9 439 67.0
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 7.2e-160 567.8 413 63.7
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 6.1e-159 564.7 428 62.9
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 6.1e-159 564.7 414 64.0
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 3.0e-158 562.4 428 62.1
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 3.9e-158 562.0 428 62.4
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.5e-157 560.1 329 78.7
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 1.7e-156 556.6 428 62.4
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 1.4e-155 553.5 428 60.7
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 9.1e-155 550.8 461 62.0
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 4.2e-152 542.0 418 64.1
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 4.2e-152 542.0 429 61.3
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 5.5e-152 541.6 426 68.3
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 4.7e-151 538.5 411 67.6
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 2.0e-149 533.1 434 61.1
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.2e-146 523.9 418 63.2
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.2e-146 523.9 426 60.1
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 5.9e-146 521.5 397 61.7
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 5.9e-146 521.5 405 63.7
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 2.7e-143 512.7 405 63.0
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 8.3e-140 501.1 422 60.2
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 1.5e-133 480.3 329 69.9
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 2.2e-116 423.3 263 76.4
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 4.9e-116 422.2 429 53.4
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 1.2e-109 401.0 305 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 1.1e-102 377.9 401 47.9
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 3.2e-99 366.3 401 51.1
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 5.8e-93 345.5 218 71.6
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 9.3e-91 338.2 430 43.3
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.2e-90 337.8 322 54.3
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 3.9e-89 332.8 305 54.1
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 1.1e-86 324.7 423 42.1
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 6.7e-81 305.4 201 68.2
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 5.7e-64 249.2 157 77.1
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 5.3e-62 242.7 166 63.9
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.8e-55 220.3 130 80.8
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 2.4e-54 217.2 135 72.6
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 9.4e-51 205.3 223 47.1
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 2.9e-44 183.7 133 66.2
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.2e-43 179.1 133 64.7
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 5.7e-40 169.5 98 77.6
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 9.8e-32 142.1 82 85.4
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 1.7e-28 131.3 131 56.5
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 5.0e-28 129.8 92 68.5
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 9.4e-27 125.6 111 63.1
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 5.9e-21 106.3 102 59.8
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 1.1e-11 75.5 53 56.6
QL05p054729 Quercus lobata HOM05D006079 ORTHO05D338210 1.5e-08 65.1 53 67.9
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 1.3e-07 62.0 53 49.1


User provided reference genes

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