Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G144200 Carya illinoinensis HOM05D003174 ORTHO05D003439 1.8e-57 225.7 112 100.0
Haze_20757 Corylus avellana HOM05D003174 ORTHO05D003439 3.3e-16 88.6 104 51.9
CANSAT21G1894 Cannabis sativa HOM05D003174 ORTHO05D003439 1.3e-15 86.7 63 61.9
TAR623G0639 Trochodendron aralioides HOM05D003174 ORTHO05D003439 2.2e-15 85.9 129 45.0
Dinv35623 Davidia involucrata HOM05D003174 ORTHO05D003439 2.8e-15 85.5 105 47.6
Potri.004G077400 Populus trichocarpa HOM05D003174 ORTHO05D003439 3.7e-15 85.1 65 60.0
TAR629G3457 Trochodendron aralioides HOM05D003174 ORTHO05D003439 3.7e-15 85.1 133 45.1
Prupe.6G252000 Prunus persica HOM05D003174 ORTHO05D003439 1.2e-13 80.1 101 46.5
Gohir.D09G152900 Gossypium hirsutum HOM05D003174 ORTHO05D003439 5.9e-13 77.8 63 58.7
Gorai.006G174400 Gossypium raimondii HOM05D003174 ORTHO05D003439 5.9e-13 77.8 63 58.7
Ciclev10011079m.g Citrus clementina HOM05D003174 ORTHO05D003439 7.7e-13 77.4 119 42.0
Actinidia11253 Actinidia chinensis HOM05D003174 ORTHO05D003439 1.7e-12 76.3 60 60.0
QL07p047847 Quercus lobata HOM05D003174 ORTHO05D003439 1.7e-12 76.3 59 57.6
MELO3C003115.2 Cucumis melo HOM05D003174 ORTHO05D003439 2.2e-12 75.9 48 66.7
Lj3A970G57 Lonicera japonica HOM05D003174 ORTHO05D003439 2.2e-12 75.9 78 51.3
Cfa017411 Carpinus fangiana HOM05D003174 ORTHO05D003439 3.8e-12 75.1 67 62.7
CsaV3_4G024810 Cucumis sativus L. HOM05D003174 ORTHO05D003439 5.0e-12 74.7 60 56.7
FAN09G4813 Fragaria x ananassa HOM05D003174 ORTHO05D003439 5.0e-12 74.7 61 57.4
Gohir.A09G157600 Gossypium hirsutum HOM05D003174 ORTHO05D003439 8.5e-12 73.9 51 62.7
Sed0000072 Sechium edule HOM05D003174 ORTHO05D003439 1.1e-11 73.6 47 68.1
COL.COLO4_14835 Corchorus olitorius HOM05D003174 ORTHO05D003439 1.5e-11 73.2 68 55.9
Duzib106G0893 Durio zibethinus HOM05D003174 ORTHO05D003439 1.5e-11 73.2 68 50.0
CSS0007124 Camellia sinensis var. sinensis HOM05D003174 ORTHO05D003439 3.2e-11 72.0 78 48.7
MD04G1124900 Malus domestica HOM05D003174 ORTHO05D003439 3.2e-11 72.0 58 58.6
Nn2g10415 Nelumbo nucifera HOM05D003174 ORTHO05D003439 3.2e-11 72.0 129 41.9
TWI53G0288 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 5.5e-11 71.2 53 62.3
FAN05G5174 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.6e-10 69.7 62 56.5
GSVIVG01034205001 Vitis vinifera HOM05D003174 ORTHO05D003439 1.6e-10 69.7 122 37.7
Glyma.13G131100 Glycine max HOM05D003174 ORTHO05D003439 8.0e-10 67.4 51 56.9
Medtr1g069020 Medicago truncatula HOM05D003174 ORTHO05D003439 8.0e-10 67.4 84 42.9
PSO384G3329 Papaver somniferum HOM05D035235 ORTHO05D003439 8.0e-10 67.4 71 52.1
RcHm_v2.0_Chr3g0467041 Rosa chinensis HOM05D003174 ORTHO05D003439 8.0e-10 67.4 56 57.1
Cc06_g02850 Coffea canephora HOM05D003174 ORTHO05D003439 1.4e-09 66.6 89 46.1
Lj1g0011268 Lotus japonicus HOM05D003174 ORTHO05D003439 1.8e-09 66.2 52 53.8
PSO339G6436 Papaver somniferum HOM05D035235 ORTHO05D003439 2.3e-09 65.9 71 50.7
QL07p031114 Quercus lobata HOM05D003174 ORTHO05D003439 2.3e-09 65.9 58 58.6
PGSC0003DMG400008848 Solanum tuberosum HOM05D003174 ORTHO05D003439 3.0e-09 65.5 63 55.6
VMungo1127G0815 Vigna mungo HOM05D003174 ORTHO05D003439 3.0e-09 65.5 59 54.2
Sabra04G0051000 Salix brachista HOM05D003174 ORTHO05D003439 6.8e-09 64.3 73 45.2
Solyc09g010550.4 Solanum lycopersicum HOM05D003174 ORTHO05D003439 6.8e-09 64.3 65 53.8
Sopen09g005270 Solanum pennellii HOM05D003174 ORTHO05D003439 8.8e-09 63.9 65 52.3
Glyma.10G043400 Glycine max HOM05D003174 ORTHO05D003439 1.5e-08 63.2 51 52.9
THA.LOC104816287 Tarenaya hassleriana HOM05D003174 ORTHO05D003439 2.0e-08 62.8 62 54.8
CAN.G97.37 Capsicum annuum HOM05D003174 ORTHO05D003439 2.6e-08 62.4 98 36.7
SGA_v2.0_scaffold6G03139 Striga asiatica HOM05D003174 ORTHO05D003439 2.6e-08 62.4 92 39.1
MBI17_g16533_MAGBIO Magnolia biondii HOM05D003174 ORTHO05D003439 3.4e-08 62.0 69 47.8
Phvul.007G157300 Phaseolus vulgaris HOM05D003174 ORTHO05D003439 3.4e-08 62.0 50 54.0
Aa31LG1G22280 Aethionema arabicum HOM05D003174 ORTHO05D003439 4.4e-08 61.6 51 56.9
MSTRG.924 Avicennia marina HOM05D003174 ORTHO05D003439 4.4e-08 61.6 75 45.3
TWI53G0119 Tripterygium wilfordii HOM05D003174 ORTHO05D003439 9.8e-08 60.5 51 56.9
FAN09G4560 Fragaria x ananassa HOM05D003174 ORTHO05D003439 1.3e-07 60.1 67 47.8
DCAR_019054 Daucus carota HOM05D003174 ORTHO05D003439 1.7e-07 59.7 98 40.8
ECA233G2094 Erigeron canadensis HOM05D003174 ORTHO05D003439 1.7e-07 59.7 99 36.4
vmacro20133 Vaccinium macrocarpon HOM05D003174 ORTHO05D003439 1.7e-07 59.7 108 38.0
Lalb_Chr06g0170971 Lupinus albus HOM05D003174 ORTHO05D003439 2.8e-07 58.9 96 34.4
Psat0s2930g0080 Pisum sativum HOM05D003174 ORTHO05D003439 2.8e-07 58.9 52 50.0
FAN05G2164 Fragaria x ananassa HOM05D003174 ORTHO05D003439 4.8e-07 58.2 52 55.8
Nitab4.5_0000761g0050 Nicotiana tabacum HOM05D003174 ORTHO05D003439 4.8e-07 58.2 40 62.5
Peaxi162Scf00165g01848 Petunia axillaris HOM05D003174 ORTHO05D003439 6.3e-07 57.8 44 56.8
AT5G02520 Arabidopsis thaliana HOM05D003174 ORTHO05D003439 8.3e-07 57.4 100 35.0
AL6G11780 Arabidopsis lyrata HOM05D003174 ORTHO05D003439 1.1e-06 57.0 91 37.4
Medtr1g069015 Medicago truncatula HOM05D003174 ORTHO05D003439 1.8e-06 56.2 41 58.5
BcaB05g21888 Brassica carinata HOM05D003174 ORTHO05D003439 2.4e-06 55.8 84 41.7
Carub.0006s0132 Capsella rubella HOM05D003174 ORTHO05D003439 2.4e-06 55.8 39 64.1
Sp6g39990 Schrenkiella parvula HOM05D003174 ORTHO05D003439 2.4e-06 55.8 41 58.5
arahy.Tifrunner.gnm1.ann1.IJS1VI Arachis hypogaea HOM05D003174 ORTHO05D003439 4.1e-06 55.1 57 45.6
BraA02t04720Z Brassica rapa HOM05D003174 ORTHO05D003439 4.1e-06 55.1 81 37.0
CARHR210840 Cardamine hirsuta HOM05D003174 ORTHO05D003439 7.0e-06 54.3 41 56.1
arahy.Tifrunner.gnm1.ann1.6UZP51 Arachis hypogaea HOM05D003174 ORTHO05D003439 9.1e-06 53.9 86 37.2
CDE07G1712 Ceratophyllum demersum HOM05D003174 ORTHO05D003439 9.1e-06 53.9 56 50.0
FvH4_6g25230 Fragaria vesca HOM05D003174 ORTHO05D003439 9.1e-06 53.9 33 78.8


User provided reference genes

Program Settings