Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G142500 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.7e-34 148.7 71 100.0
CiPaw.16G094700 Carya illinoinensis HOM05D005992 ORTHO05D007476 8.6e-18 93.2 48 89.6
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 7.5e-14 80.1 65 67.7
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 8.3e-13 76.6 65 60.0
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 3.2e-12 74.7 61 55.7
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 4.6e-11 70.9 64 57.8
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 6.0e-11 70.5 65 58.5
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 1.3e-10 69.3 62 59.7
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 3.0e-10 68.2 66 59.1
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 3.0e-10 68.2 63 58.7
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 3.0e-10 68.2 63 58.7
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 3.0e-10 68.2 63 58.7
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 3.0e-10 68.2 67 52.2
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 5.1e-10 67.4 63 61.9
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 5.1e-10 67.4 63 58.7
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 6.6e-10 67.0 68 52.9
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 6.6e-10 67.0 68 52.9
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 6.6e-10 67.0 63 58.7
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 6.6e-10 67.0 60 58.3
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 6.6e-10 67.0 66 54.5
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 1.1e-09 66.2 33 87.9
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 1.1e-09 66.2 70 57.1
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 1.1e-09 66.2 70 57.1
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.1e-09 66.2 66 56.1
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 1.5e-09 65.9 65 49.2
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 1.5e-09 65.9 65 56.9
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 1.9e-09 65.5 61 57.4
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 1.9e-09 65.5 70 57.1
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 5.6e-09 63.9 61 52.5
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 7.3e-09 63.5 70 55.7
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 7.3e-09 63.5 66 53.0
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 7.3e-09 63.5 65 52.3
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 9.5e-09 63.2 61 52.5
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 1.2e-08 62.8 66 51.5
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 1.6e-08 62.4 68 50.0
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 2.8e-08 61.6 61 54.1
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 3.6e-08 61.2 61 50.8
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 8.1e-08 60.1 66 51.5
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 1.1e-07 59.7 61 52.5
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 1.1e-07 59.7 64 50.0
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 1.8e-07 58.9 64 51.6
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 2.4e-07 58.5 61 45.9
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 3.1e-07 58.2 62 50.0
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 4.0e-07 57.8 61 49.2
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 6.8e-07 57.0 65 49.2
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 6.8e-07 57.0 65 50.8
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 6.8e-07 57.0 62 46.8
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 8.9e-07 56.6 66 47.0
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 1.2e-06 56.2 64 53.1
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 1.5e-06 55.8 68 45.6
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 7.6e-06 53.5 59 44.1


User provided reference genes

Program Settings