Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G136900 Carya illinoinensis HOM05D005542 ORTHO05D006708 2.0e-132 475.7 226 100.0
Sed0012482 Sechium edule HOM05D005542 ORTHO05D006708 1.8e-69 266.5 215 61.9
Sed0011219 Sechium edule HOM05D005542 ORTHO05D006708 9.0e-69 264.2 216 59.3
FAN02G2564 Fragaria x ananassa HOM05D005542 ORTHO05D006708 2.6e-68 262.7 212 60.8
BcaB05g21852 Brassica carinata HOM05D005542 ORTHO05D006708 3.4e-68 262.3 216 59.7
FAN14G1906 Fragaria x ananassa HOM05D005542 ORTHO05D006708 4.5e-68 261.9 212 59.9
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 7.6e-68 261.2 211 59.2
FvH4_6g15490 Fragaria vesca HOM05D005542 ORTHO05D006708 1.3e-67 260.4 212 59.9
FAN09G2765 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.3e-67 260.4 212 59.9
BraA02t04743Z Brassica rapa HOM05D005542 ORTHO05D006708 3.8e-67 258.8 216 60.2
THA.LOC104823241 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 4.9e-67 258.5 217 59.9
BcaC03g13032 Brassica carinata HOM05D005542 ORTHO05D006708 6.4e-67 258.1 217 59.4
FAN05G5506 Fragaria x ananassa HOM05D005542 ORTHO05D006708 6.4e-67 258.1 212 59.4
RcHm_v2.0_Chr3g0468971 Rosa chinensis HOM05D005542 ORTHO05D006708 8.4e-67 257.7 212 59.4
Dinv35725 Davidia involucrata HOM05D005542 ORTHO05D006708 1.1e-66 257.3 215 59.1
Cfa017517 Carpinus fangiana HOM05D005542 ORTHO05D006708 1.4e-66 256.9 214 59.8
Lj3P980T19 Lonicera japonica HOM05D005542 ORTHO05D006708 1.4e-66 256.9 212 58.5
BcaC06g32035 Brassica carinata HOM05D005542 ORTHO05D006708 1.9e-66 256.5 217 59.0
BolC9t60101H Brassica oleracea HOM05D005542 ORTHO05D006708 1.9e-66 256.5 217 59.0
TAR623G0063 Trochodendron aralioides HOM05D005542 ORTHO05D006708 1.9e-66 256.5 210 59.5
Aqoxy4G03224 Aquilegia oxysepala HOM05D005542 ORTHO05D006708 2.4e-66 256.1 210 58.6
C02p00780 Brassica napus HOM05D005542 ORTHO05D006708 2.4e-66 256.1 210 61.0
C09p73660 Brassica napus HOM05D005542 ORTHO05D006708 2.4e-66 256.1 217 59.0
BolC2t06076H Brassica oleracea HOM05D005542 ORTHO05D006708 2.4e-66 256.1 210 61.0
MSTRG.10302 Avicennia marina HOM05D005542 ORTHO05D006708 5.5e-66 255.0 212 59.9
Gorai.001G248000 Gossypium raimondii HOM05D005542 ORTHO05D006708 5.5e-66 255.0 214 59.3
Cfa017518 Carpinus fangiana HOM05D005542 ORTHO05D006708 7.1e-66 254.6 214 59.8
Migut.L01666 Erythranthe guttata HOM05D005542 ORTHO05D006708 9.3e-66 254.2 212 59.0
Dinv37264 Davidia involucrata HOM05D005542 ORTHO05D006708 2.7e-65 252.7 212 59.9
Manes.08G004100 Manihot esculenta HOM05D005542 ORTHO05D006708 6.0e-65 251.5 224 56.7
Prupe.6G240200 Prunus persica HOM05D005542 ORTHO05D006708 6.0e-65 251.5 215 58.1
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 7.9e-65 251.1 214 58.4
Haze_20632 Corylus avellana HOM05D005542 ORTHO05D006708 1.3e-64 250.4 214 58.4
MSTRG.19142 Avicennia marina HOM05D005542 ORTHO05D006708 3.0e-64 249.2 212 58.5
MD12G1123000 Malus domestica HOM05D005542 ORTHO05D006708 3.0e-64 249.2 215 56.7
CANSAT80G0049 Cannabis sativa HOM05D005542 ORTHO05D006708 5.1e-64 248.4 214 57.9
TAR369G0130 Trochodendron aralioides HOM05D005542 ORTHO05D006708 8.7e-64 247.7 212 55.7
Cc06_g03660 Coffea canephora HOM05D005542 ORTHO05D006708 1.1e-63 247.3 212 58.5
Lsat_1_v5_gn_1_54060 Lactuca sativa HOM05D005542 ORTHO05D006708 1.1e-63 247.3 210 57.1
CAN.G1676.11 Capsicum annuum HOM05D005542 ORTHO05D006708 2.5e-63 246.1 210 60.5
Potri.006G130700 Populus trichocarpa HOM05D005542 ORTHO05D006708 2.5e-63 246.1 215 57.7
Thhalv10014320m.g Eutrema salsugineum HOM05D005542 ORTHO05D006708 4.3e-63 245.4 221 55.7
THA.LOC104816326 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 7.4e-63 244.6 218 56.4
AL6G12370 Arabidopsis lyrata HOM05D005542 ORTHO05D006708 9.6e-63 244.2 211 58.3
Sabra16G0093000 Salix brachista HOM05D005542 ORTHO05D006708 1.3e-62 243.8 213 56.3
CARHR210250 Cardamine hirsuta HOM05D005542 ORTHO05D006708 1.6e-62 243.4 216 56.9
Potri.016G086700 Populus trichocarpa HOM05D005542 ORTHO05D006708 1.6e-62 243.4 210 58.6
Sabra06G0102700 Salix brachista HOM05D005542 ORTHO05D006708 2.8e-62 242.7 215 57.2
SGA_v2.0_scaffold94G28671 Striga asiatica HOM05D005542 ORTHO05D006708 2.8e-62 242.7 212 57.5
Carub.0006s0187 Capsella rubella HOM05D005542 ORTHO05D006708 3.7e-62 242.3 211 58.3
AT5G03080 Arabidopsis thaliana HOM05D005542 ORTHO05D006708 4.8e-62 241.9 211 57.8
AUR62040036 Chenopodium quinoa HOM05D005542 ORTHO05D006708 8.1e-62 241.1 217 55.8
Psat6g070280 Pisum sativum HOM05D005542 ORTHO05D006708 1.4e-61 240.4 215 55.3
PGR142G2113 Punica granatum HOM05D005542 ORTHO05D006708 1.8e-61 240.0 215 56.3
AUR62042543 Chenopodium quinoa HOM05D005542 ORTHO05D006708 6.9e-61 238.0 217 54.8
HanXRQChr13g0399571 Helianthus annuus HOM05D005542 ORTHO05D006708 9.0e-61 237.7 210 56.7
Lsat_1_v5_gn_6_30080 Lactuca sativa HOM05D005542 ORTHO05D006708 2.0e-60 236.5 210 57.1
TPR.G30255 Trifolium pratense HOM05D005542 ORTHO05D006708 1.0e-59 234.2 210 55.2
Ah.01g009250 Amaranthus hybridus HOM05D005542 ORTHO05D006708 2.2e-59 233.0 212 54.2
Manes.08G004101 Manihot esculenta HOM05D005542 ORTHO05D006708 2.2e-59 233.0 224 54.5
Manes.08G004113 Manihot esculenta HOM05D005542 ORTHO05D006708 2.2e-59 233.0 224 54.5
Manes.08G004123 Manihot esculenta HOM05D005542 ORTHO05D006708 2.2e-59 233.0 224 54.5
Manes.08G004124 Manihot esculenta HOM05D005542 ORTHO05D006708 2.2e-59 233.0 224 54.5
Manes.08G004129 Manihot esculenta HOM05D005542 ORTHO05D006708 2.2e-59 233.0 224 54.5
Zm00001eb013250 Zea mays HOM05D005542 ORTHO05D006708 2.9e-59 232.6 219 54.3
HPP92_012051 Vanilla planifolia HOM05D005542 ORTHO05D006708 8.4e-59 231.1 219 54.3
Os03g0288700 Oryza sativa ssp. japonica HOM05D005542 ORTHO05D006708 1.4e-58 230.3 218 54.6
CSS0028203 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 3.2e-58 229.2 212 55.2
SEGI_14044 Sequoiadendron giganteum HOM05D005542 ORTHO05D006708 4.2e-58 228.8 211 52.6
BcaNung06917 Brassica carinata HOM05D005542 ORTHO05D006708 5.5e-58 228.4 216 55.6
CSS0011727 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 1.2e-57 227.3 212 54.7
SalBow3G3282 Salvia bowleyana HOM05D005542 ORTHO05D006708 1.6e-57 226.9 210 55.7
SalBow3G3389 Salvia bowleyana HOM05D005542 ORTHO05D006708 1.6e-57 226.9 210 55.7
MBI15_g16380_MAGBIO Magnolia biondii HOM05D005542 ORTHO05D006708 2.1e-57 226.5 210 55.2
VMungo1309G1614 Vigna mungo HOM05D005542 ORTHO05D006708 4.6e-57 225.3 214 53.7
Medtr1g066770 Medicago truncatula HOM05D005542 ORTHO05D006708 1.8e-56 223.4 218 53.7
Aa31LG1G21960 Aethionema arabicum HOM05D005542 ORTHO05D006708 3.0e-56 222.6 212 54.7
SHI12539 Sapria himalayana HOM05D005542 ORTHO05D006708 5.1e-56 221.9 218 55.0
unitig_26.g9217 Utricularia gibba HOM05D005542 ORTHO05D006708 5.1e-56 221.9 208 53.8
Lj5g0010386 Lotus japonicus HOM05D005542 ORTHO05D006708 6.7e-56 221.5 210 52.4
CiPaw.09G179200 Carya illinoinensis HOM05D005542 ORTHO05D006708 3.3e-55 219.2 210 52.9
ClCG02G023990 Citrullus lanatus HOM05D005542 ORTHO05D006708 4.3e-55 218.8 216 52.3
MELO3C014679.2 Cucumis melo HOM05D005542 ORTHO05D006708 5.7e-55 218.4 216 53.2
Sopen09g002330 Solanum pennellii HOM05D005542 ORTHO05D006708 7.4e-55 218.0 210 53.8
Cpa.g.sc174.15 Carica papaya HOM05D005542 ORTHO05D006708 9.6e-55 217.6 213 52.6
DCAR_009281 Daucus carota HOM05D005542 ORTHO05D006708 1.3e-54 217.2 210 53.3
Sc02g0001930 Simmondsia chinensis HOM05D005542 ORTHO05D006708 1.3e-54 217.2 213 53.5
Oeu060090.1 Olea europaea HOM05D005542 ORTHO05D006708 2.8e-54 216.1 210 53.3
Nn2g10693 Nelumbo nucifera HOM05D005542 ORTHO05D006708 3.7e-54 215.7 215 50.7
Nn2g10694 Nelumbo nucifera HOM05D005542 ORTHO05D006708 3.7e-54 215.7 215 50.7
Ciclev10012685m.g Citrus clementina HOM05D005542 ORTHO05D006708 8.2e-54 214.5 213 51.6
Eucgr.K03216 Eucalyptus grandis HOM05D005542 ORTHO05D006708 1.8e-53 213.4 213 54.5
CsaV3_4G023360 Cucumis sativus L. HOM05D005542 ORTHO05D006708 2.4e-53 213.0 216 52.3
Gohir.D13G095800 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.4e-53 213.0 214 51.4
Actinidia19704 Actinidia chinensis HOM05D005542 ORTHO05D006708 4.1e-53 212.2 184 56.5
A10p32790 Brassica napus HOM05D005542 ORTHO05D006708 4.1e-53 212.2 224 50.4
BraA10t45313Z Brassica rapa HOM05D005542 ORTHO05D006708 4.1e-53 212.2 224 50.4
PSO063G7551 Papaver somniferum HOM05D005542 ORTHO05D006708 4.1e-53 212.2 216 50.5
PSO339G3338 Papaver somniferum HOM05D005542 ORTHO05D006708 4.1e-53 212.2 216 50.5
Solyc09g007450.3 Solanum lycopersicum HOM05D005542 ORTHO05D006708 4.1e-53 212.2 210 52.9
QL07p045114 Quercus lobata HOM05D005542 ORTHO05D006708 9.0e-53 211.1 212 51.4
Mapoly0060s0060 Marchantia polymorpha HOM05D005542 ORTHO05D006708 1.2e-52 210.7 210 48.6
Duzib128G1803 Durio zibethinus HOM05D005542 ORTHO05D006708 1.5e-52 210.3 214 51.9
Sp6g39610 Schrenkiella parvula HOM05D005542 ORTHO05D006708 1.5e-52 210.3 217 50.2
Pp3c16_13170 Physcomitrium patens HOM05D005542 ORTHO05D006708 3.4e-52 209.1 211 50.2
Gohir.A13G082150 Gossypium hirsutum HOM05D005542 ORTHO05D006708 7.6e-52 208.0 214 50.9
Thecc.05G055500 Theobroma cacao HOM05D005542 ORTHO05D006708 7.6e-52 208.0 214 51.9
MD04G1105500 Malus domestica HOM05D005542 ORTHO05D006708 1.0e-51 207.6 217 50.2
Pp3c5_750 Physcomitrium patens HOM05D005542 ORTHO05D006708 1.0e-51 207.6 211 51.2
SMO367G0756 Selaginella moellendorffii HOM05D005542 ORTHO05D006708 2.2e-51 206.5 210 49.5
HanXRQChr13g0399561 Helianthus annuus HOM05D005542 ORTHO05D006708 6.5e-51 204.9 210 50.5
Nitab4.5_0000669g0160 Nicotiana tabacum HOM05D005542 ORTHO05D006708 9.3e-50 201.1 210 51.9
ATR0314G039 Amborella trichopoda HOM05D005542 ORTHO05D006708 7.9e-49 198.0 213 49.3
HanXRQChr11g0350001 Helianthus annuus HOM05D005542 ORTHO05D006708 8.7e-48 194.5 210 48.6
Glyma.10G050300 Glycine max HOM05D005542 ORTHO05D006708 4.8e-46 188.7 217 47.5
Lalb_Chr21g0314711 Lupinus albus HOM05D005542 ORTHO05D006708 1.4e-45 187.2 216 45.8
Phvul.007G164600 Phaseolus vulgaris HOM05D005542 ORTHO05D006708 9.0e-45 184.5 221 45.2
Glyma.13G137800 Glycine max HOM05D005542 ORTHO05D006708 1.5e-44 183.7 218 46.8
CDE02G2407 Ceratophyllum demersum HOM05D000280 ORTHO05D000632 4.5e-44 182.2 159 57.9
Oeu029419.1 Olea europaea HOM05D005542 ORTHO05D006708 5.0e-43 178.7 162 56.2
BolC9t60096H Brassica oleracea HOM05D005542 ORTHO05D006708 3.2e-42 176.0 148 58.1
EL10Ac7g16508 Beta vulgaris HOM05D005542 ORTHO05D006708 2.7e-41 172.9 166 53.0
COL.COLO4_27065 Corchorus olitorius HOM05D005542 ORTHO05D006708 4.6e-41 172.2 167 53.9
COL.COLO4_27064 Corchorus olitorius HOM05D005542 ORTHO05D006708 1.0e-40 171.0 166 54.2
PGR004G0770 Punica granatum HOM05D005542 ORTHO05D006708 3.0e-40 169.5 210 44.3
Peaxi162Scf00005g04018 Petunia axillaris HOM05D005542 ORTHO05D006708 1.4e-37 160.6 210 43.3
Gohir.A04G076100 Gossypium hirsutum HOM05D005542 ORTHO05D006708 6.9e-37 158.3 161 50.9
Nitab4.5_0007806g0040 Nicotiana tabacum HOM05D005542 ORTHO05D006708 4.5e-36 155.6 210 41.9
Atru.chr5.2634 Acer truncatum HOM05D005542 ORTHO05D006708 8.5e-35 151.4 128 58.6
Gohir.D04G115201 Gossypium hirsutum HOM05D005542 ORTHO05D006708 8.5e-35 151.4 213 42.3
MD04G1102900 Malus domestica HOM05D005542 ORTHO05D006708 1.8e-32 143.7 132 54.5
Ca_11456_v3 Cicer arietinum L. HOM05D005542 ORTHO05D006708 2.4e-29 133.3 136 50.7
Gorai.009G419800 Gossypium raimondii HOM05D005542 ORTHO05D006708 1.2e-28 131.0 215 38.6
Lalb_Chr06g0171481 Lupinus albus HOM05D005542 ORTHO05D006708 2.5e-26 123.2 211 36.0
VMungo0720G1693 Vigna mungo HOM05D005542 ORTHO05D006708 1.5e-23 114.0 136 43.4
Rhsim04G0149700 Rhododendron simsii HOM05D005542 ORTHO05D006708 1.8e-21 107.1 86 62.8
ECA233G4004 Erigeron canadensis HOM05D005542 ORTHO05D006708 4.5e-20 102.4 90 60.0
Cpa.g.c48297 Carica papaya HOM05D005542 ORTHO05D006708 7.2e-18 95.1 97 48.5
Cre06.g272400 Chlamydomonas reinhardtii HOM05D005542 ORTHO05D006708 1.2e-12 77.8 213 31.0
SEGI_19312 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 1.8e-08 63.9 183 29.0
VMungo1215G0425 Vigna mungo HOM05D003144 ORTHO05D003539 5.2e-08 62.4 142 33.8
CDE11G1071 Ceratophyllum demersum HOM05D003144 ORTHO05D003539 1.2e-07 61.2 176 26.1
Lsat_1_v5_gn_3_75940 Lactuca sativa HOM05D003144 ORTHO05D003539 3.4e-07 59.7 170 28.2
Lalb_Chr05g0212641 Lupinus albus HOM05D003144 ORTHO05D003539 3.4e-07 59.7 135 32.6
Nn1g04916 Nelumbo nucifera HOM05D003144 ORTHO05D003539 3.4e-07 59.7 157 30.6
Lj2g0003092 Lotus japonicus HOM05D003144 ORTHO05D003539 5.7e-07 58.9 147 31.3
Potri.007G021600 Populus trichocarpa HOM05D003144 ORTHO05D003539 9.8e-07 58.2 135 30.4
HanXRQChr16g0530671 Helianthus annuus HOM05D003144 ORTHO05D003539 1.3e-06 57.8 156 30.8
SEGI_25520 Sequoiadendron giganteum HOM05D003144 ORTHO05D003539 1.3e-06 57.8 139 31.7
Ca_22297_v3 Cicer arietinum L. HOM05D003144 ORTHO05D003539 2.2e-06 57.0 141 30.5
Hma1.2p1_1297F.1_g274090 Hydrangea macrophylla HOM05D003144 ORTHO05D003539 2.2e-06 57.0 125 32.8
Medtr8g077115 Medicago truncatula HOM05D003144 ORTHO05D003539 2.2e-06 57.0 145 32.4
Glyma.01G171800 Glycine max HOM05D003144 ORTHO05D003539 2.8e-06 56.6 145 31.7
Phvul.002G033600 Phaseolus vulgaris HOM05D003144 ORTHO05D003539 3.7e-06 56.2 142 31.7
Migut.H02525 Erythranthe guttata HOM05D003144 ORTHO05D003539 4.9e-06 55.8 135 30.4
HanXRQChr14g0440521 Helianthus annuus HOM05D003144 ORTHO05D003539 4.9e-06 55.8 124 33.1
Psat4g094920 Pisum sativum HOM05D003144 ORTHO05D003539 4.9e-06 55.8 137 28.5
Medtr8g077120 Medicago truncatula HOM05D003144 ORTHO05D003539 6.3e-06 55.5 131 29.8
Sabra16G0064000 Salix brachista HOM05D004880 ORTHO05D006130 6.3e-06 55.5 160 28.1
Glyma.11G071400 Glycine max HOM05D003144 ORTHO05D003539 8.3e-06 55.1 159 30.2


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