Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 2546.2 1269 100.0
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 2343.2 1269 91.4
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 2332.4 1269 91.3
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 2314.7 1267 90.5
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 2292.3 1268 88.7
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 2270.0 1267 88.2
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2268.8 1269 88.7
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 2268.0 1269 88.7
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 2261.5 1269 88.6
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 2261.1 1263 88.4
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 2260.7 1267 87.7
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 2257.6 1267 87.8
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 2257.3 1270 88.0
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 2256.5 1267 87.5
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 2255.3 1271 88.0
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2248.4 1267 87.1
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 2247.6 1269 87.2
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 2246.5 1268 87.3
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 2245.7 1267 87.1
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2243.8 1268 87.1
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 2243.4 1268 87.1
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 2243.0 1267 86.8
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 2231.4 1267 86.4
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 2231.4 1267 87.1
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 2229.9 1267 86.3
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 2228.4 1266 86.3
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2227.6 1267 87.0
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2226.1 1267 87.0
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2225.7 1268 85.7
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2222.2 1267 86.7
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2219.1 1262 87.1
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 2218.7 1263 86.4
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 2217.6 1267 85.4
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 2217.6 1269 85.2
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 2216.4 1272 85.0
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 2216.0 1269 85.2
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 2214.9 1269 86.2
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 2213.0 1268 85.2
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 2213.0 1269 84.9
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 2211.8 1267 84.9
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2211.0 1267 85.5
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2209.5 1267 85.4
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2209.1 1267 84.6
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 2208.7 1267 84.6
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 2208.3 1267 84.5
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 2207.9 1267 85.0
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 2205.3 1267 84.5
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 2203.3 1267 85.0
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 2201.0 1268 85.8
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 2199.9 1267 84.7
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 2197.9 1267 84.8
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 2197.9 1267 84.5
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2196.8 1267 84.9
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 2196.0 1239 87.1
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 2195.2 1267 85.2
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 2193.7 1268 84.7
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 2192.2 1268 84.9
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 2191.4 1268 84.4
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 2189.8 1267 85.9
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 2189.5 1266 84.5
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 2187.9 1269 84.5
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2186.0 1268 84.9
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2185.6 1268 84.6
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 2184.1 1267 84.1
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 2181.4 1273 84.9
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 2180.6 1268 84.9
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 2179.8 1267 84.4
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 2178.7 1269 84.8
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 2177.9 1268 84.3
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 2177.5 1267 84.3
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 2177.1 1266 83.9
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 2175.6 1267 84.1
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 2173.3 1208 89.0
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 2171.0 1268 84.0
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 2169.8 1269 84.5
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 2161.7 1268 83.5
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 2159.0 1266 83.0
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 2158.6 1249 84.7
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 2158.3 1270 83.5
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1269 83.4
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 2151.3 1269 83.5
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 2147.9 1249 83.9
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 2137.5 1263 83.0
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 2135.1 1268 83.2
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 2131.7 1268 82.7
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 2118.2 1274 83.0
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 2110.5 1270 81.0
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 2086.2 1270 79.7
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 2083.1 1267 80.7
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 2075.8 1269 80.9
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2068.1 1267 81.2
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 2054.3 1271 80.3
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 2013.4 1266 79.1
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1987.2 1161 84.3
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1972.2 1264 76.9
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1945.6 1268 74.6
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1906.3 1271 74.4
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1889.4 1069 85.5
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1885.2 1278 72.4
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1862.4 1191 77.7
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1860.1 1249 74.5
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1857.8 1089 83.7
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1827.8 1268 73.4
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1822.4 1266 71.5
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1812.0 1270 72.9
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1789.2 1130 78.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1662.1 963 83.8
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1545.8 1047 73.4
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1540.4 1323 61.3
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1412.5 813 85.0
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1388.2 1268 61.0
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1321.2 1331 53.6
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1307.0 1398 53.2
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1286.9 725 86.8
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1181.8 1036 62.5
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1147.9 811 73.7
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 2.9e-273 946.0 572 82.2
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.0e-262 911.0 502 89.8
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 2.8e-260 902.9 1247 41.7
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 2.0e-226 790.4 528 76.1
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-223 780.8 651 60.7
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 3.1e-203 713.4 455 79.1
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.1e-187 659.8 389 86.1
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 3.2e-131 474.2 359 68.2
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 3.4e-125 454.1 313 76.0
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 2.6e-109 401.4 270 75.6
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.2e-81 307.4 480 42.1
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.4e-70 272.7 170 77.1
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.6e-69 267.7 170 76.5
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.7e-68 265.8 170 75.9
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 5.8e-64 250.8 138 91.3
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 3.0e-60 238.4 234 56.0
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 1.2e-50 206.5 116 85.3
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.2e-40 173.3 91 90.1
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-39 169.9 152 64.5
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 3.2e-38 165.2 182 54.4
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 3.4e-32 145.2 99 67.7
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 8.1e-26 124.0 104 61.5


User provided reference genes

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