Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 9.4e-53 209.9 106 100.0
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.0e-39 165.6 106 77.4
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 2.3e-38 162.2 104 77.9
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 1.5e-37 159.5 103 78.6
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 4.3e-37 157.9 105 77.1
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 7.3e-37 157.1 105 77.1
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 1.2e-34 149.8 103 72.8
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 7.5e-34 147.1 106 72.6
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 3.7e-33 144.8 106 68.9
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.7e-33 144.8 106 68.9
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 3.7e-33 144.8 106 68.9
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 4.9e-33 144.4 106 69.8
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 8.3e-33 143.7 106 70.8
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 1.1e-32 143.3 106 67.9
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.8e-32 142.5 106 68.9
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.4e-32 142.1 100 69.0
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 3.2e-32 141.7 106 68.9
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 3.2e-32 141.7 106 68.9
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 4.1e-32 141.4 106 67.0
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 5.4e-32 141.0 103 70.9
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 5.4e-32 141.0 107 69.2
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 7.0e-32 140.6 103 67.0
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 7.0e-32 140.6 103 67.0
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 9.2e-32 140.2 103 69.9
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 1.2e-31 139.8 106 65.1
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.2e-31 139.8 106 66.0
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 1.6e-31 139.4 103 69.9
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 2.0e-31 139.0 106 67.0
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 2.0e-31 139.0 103 71.8
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 4.6e-31 137.9 97 67.0
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 5.9e-31 137.5 106 66.0
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 7.8e-31 137.1 107 66.4
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.0e-30 136.7 102 62.7
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.3e-30 136.3 98 72.4
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 1.7e-30 136.0 106 65.1
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 2.3e-30 135.6 100 68.0
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 2.3e-30 135.6 100 68.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.0e-30 135.2 107 65.4
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 3.9e-30 134.8 97 68.0
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 5.0e-30 134.4 106 64.2
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 8.6e-30 133.7 103 65.0
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 8.6e-30 133.7 103 66.0
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 1.1e-29 133.3 95 66.3
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.5e-29 132.9 103 65.0
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.9e-29 132.5 87 73.6
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 1.9e-29 132.5 97 69.1
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 2.5e-29 132.1 103 65.0
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 3.3e-29 131.7 105 62.9
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 3.3e-29 131.7 106 65.1
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 7.3e-29 130.6 84 73.8
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 7.3e-29 130.6 84 73.8
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.6e-28 129.4 106 63.2
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 2.8e-28 128.6 102 65.7
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 2.8e-28 128.6 89 69.7
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 2.8e-28 128.6 103 64.1
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 4.7e-28 127.9 100 65.0
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 4.7e-28 127.9 103 63.1
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 4.7e-28 127.9 101 63.4
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 8.0e-28 127.1 102 60.8
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 8.0e-28 127.1 89 68.5
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 8.0e-28 127.1 106 63.2
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 1.0e-27 126.7 106 62.3
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 1.4e-27 126.3 106 59.4
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.4e-27 126.3 89 66.3
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 2.3e-27 125.6 99 64.6
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 4.0e-27 124.8 95 68.4
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 8.9e-27 123.6 100 62.0
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 8.9e-27 123.6 94 68.1
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.5e-26 122.9 94 67.0
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.5e-26 122.9 106 58.5
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.5e-26 122.9 83 72.3
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 2.0e-26 122.5 96 64.6
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 2.0e-26 122.5 106 57.5
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 2.0e-26 122.5 89 66.3
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 2.6e-26 122.1 95 64.2
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 3.4e-26 121.7 83 72.3
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 4.4e-26 121.3 103 58.3
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 5.8e-26 120.9 91 63.7
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.3e-25 119.8 96 61.5
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 1.3e-25 119.8 106 58.5
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 1.3e-25 119.8 106 59.4
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 1.7e-25 119.4 89 61.8
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 2.2e-25 119.0 91 67.0
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 2.9e-25 118.6 96 59.4
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.9e-25 118.6 96 59.4
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.9e-25 118.6 96 59.4
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.9e-25 118.6 96 59.4
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 2.9e-25 118.6 96 59.4
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 4.9e-25 117.9 98 56.1
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 6.4e-25 117.5 94 62.8
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 8.3e-25 117.1 94 61.7
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 1.1e-24 116.7 91 61.5
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 1.9e-24 115.9 107 57.0
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 4.1e-24 114.8 99 54.5
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 4.1e-24 114.8 90 65.6
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 7.0e-24 114.0 81 64.2
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 7.8e-23 110.5 93 58.1
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 6.6e-22 107.5 77 70.1
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.5e-21 105.5 105 54.3
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 3.3e-21 105.1 80 63.8
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 4.3e-21 104.8 89 58.4
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 2.8e-20 102.1 102 49.0
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 8.1e-20 100.5 107 50.5
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 2.0e-18 95.9 83 49.4
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 4.4e-18 94.7 63 73.0
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 7.5e-18 94.0 83 49.4
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 4.9e-17 91.3 100 50.0
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 9.2e-16 87.0 87 46.0
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 1.0e-14 83.6 81 43.2
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 1.1e-11 73.6 71 50.7
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 1.1e-11 73.6 84 48.8
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 6.8e-11 70.9 84 39.3
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.4e-08 62.4 84 34.5
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 1.2e-07 60.1 80 37.5
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 8.6e-06 53.9 92 37.0


User provided reference genes

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