Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 3.8e-73 278.1 142 100.0
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 7.4e-37 157.5 120 70.8
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 1.3e-36 156.8 131 63.4
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 2.8e-36 155.6 128 62.5
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 3.5e-34 148.7 124 62.9
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 4.5e-34 148.3 123 60.2
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 5.9e-34 147.9 118 65.3
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 6.5e-33 144.4 123 62.6
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 3.2e-32 142.1 123 61.8
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 5.5e-32 141.4 115 64.3
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 7.2e-32 141.0 121 61.2
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 7.2e-32 141.0 127 58.3
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 2.1e-31 139.4 121 60.3
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 3.6e-31 138.7 125 56.8
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 4.7e-31 138.3 119 61.3
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 8.0e-31 137.5 124 58.1
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 3.0e-30 135.6 119 59.7
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 3.0e-30 135.6 126 59.5
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 6.7e-30 134.4 121 58.7
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 1.5e-29 133.3 124 52.4
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 1.5e-29 133.3 118 58.5
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.5e-29 133.3 121 57.9
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 2.0e-29 132.9 123 57.7
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 7.5e-29 131.0 119 55.5
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 9.7e-29 130.6 119 55.5
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 1.3e-28 130.2 128 50.8
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 2.2e-28 129.4 119 54.6
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 2.8e-28 129.0 126 50.8
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 5.3e-27 124.8 128 48.4
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 9.1e-27 124.0 128 48.4
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 9.1e-27 124.0 126 53.2
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.6e-26 123.2 152 47.4
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 2.7e-26 122.5 92 67.4
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 4.5e-26 121.7 128 51.6
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 7.7e-26 120.9 125 52.0
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 7.7e-26 120.9 123 54.5
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 7.7e-26 120.9 128 51.6
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 1.0e-25 120.6 123 55.3
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 1.7e-25 119.8 122 53.3
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 2.2e-25 119.4 124 53.2
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 2.2e-25 119.4 132 46.2
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 2.9e-25 119.0 121 48.8
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 3.8e-25 118.6 122 51.6
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 3.8e-25 118.6 129 52.7
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 1.1e-24 117.1 104 56.7
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 3.2e-24 115.5 140 49.3
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 3.2e-24 115.5 122 51.6
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 4.2e-24 115.2 121 53.7
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 4.2e-24 115.2 127 52.8
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 7.2e-24 114.4 119 52.1
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 1.2e-23 113.6 128 49.2
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 2.1e-23 112.8 104 53.8
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 2.7e-23 112.5 127 45.7
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 3.6e-23 112.1 134 44.8
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 8.0e-23 110.9 120 52.5
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 1.0e-22 110.5 104 53.8
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.4e-22 110.2 111 54.1
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 1.8e-22 109.8 123 48.8
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 1.8e-22 109.8 119 47.9
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 2.3e-22 109.4 122 49.2
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 3.0e-22 109.0 127 45.7
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 5.2e-22 108.2 105 58.1
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 6.8e-22 107.8 126 49.2
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 1.2e-21 107.1 130 48.5
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 2.0e-21 106.3 113 54.9
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 3.4e-21 105.5 120 51.7
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 3.4e-21 105.5 119 44.5
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 3.4e-21 105.5 124 44.4
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 4.4e-21 105.1 110 50.9
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 4.4e-21 105.1 103 52.4
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 4.4e-21 105.1 116 50.0
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 5.7e-21 104.8 110 51.8
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 5.7e-21 104.8 103 53.4
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 7.5e-21 104.4 119 48.7
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 9.8e-21 104.0 129 44.2
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 1.3e-20 103.6 117 42.7
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 1.7e-20 103.2 116 51.7
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 1.7e-20 103.2 124 46.0
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 2.2e-20 102.8 122 48.4
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 2.8e-20 102.4 109 50.5
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 3.7e-20 102.1 112 53.6
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 4.8e-20 101.7 107 49.5
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 4.8e-20 101.7 112 52.7
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 8.3e-20 100.9 87 62.1
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 1.8e-19 99.8 116 50.0
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 3.1e-19 99.0 122 42.6
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 5.4e-19 98.2 118 48.3
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 5.9e-18 94.7 129 45.0
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 1.0e-17 94.0 115 47.8
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 5.0e-17 91.7 141 41.8
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 1.5e-16 90.1 118 42.4
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 3.3e-16 89.0 75 57.3
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 9.5e-16 87.4 112 42.9
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 3.6e-15 85.5 133 37.6
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 8.0e-15 84.3 105 46.7
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 1.8e-14 83.2 94 50.0
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 3.0e-14 82.4 137 35.8
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 2.0e-13 79.7 54 72.2
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 2.6e-13 79.3 123 39.8
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 3.7e-12 75.5 74 50.0
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 9.2e-11 70.9 71 52.1
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 9.2e-11 70.9 71 52.1
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 2.7e-10 69.3 70 47.1
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 2.7e-10 69.3 70 47.1
FAN25G0807 Fragaria x ananassa HOM05D000251 ORTHO05D000414 1.3e-09 67.0 94 40.4
CDE03G0351 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 2.3e-09 66.2 78 46.2
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 2.9e-09 65.9 73 50.7
Actinidia38172 Actinidia chinensis HOM05D007217 ORTHO05D009092 5.0e-09 65.1 69 50.7
CDE03G0339 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 5.0e-09 65.1 78 44.9
Zm00001eb228930 Zea mays HOM05D007217 ORTHO05D009092 4.0e-06 55.5 77 42.9


User provided reference genes

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