Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G111400 Carya illinoinensis HOM05D000388 ORTHO05D009843 6.5e-47 190.3 89 100.0
Migut.D01348 Erythranthe guttata HOM05D000388 ORTHO05D009843 9.7e-43 176.4 88 95.5
Migut.J01359 Erythranthe guttata HOM05D000388 ORTHO05D009843 9.7e-43 176.4 88 95.5
RcHm_v2.0_CPg0502271 Rosa chinensis HOM05D000388 ORTHO05D009843 2.2e-42 175.3 88 94.3
Hma1.2p1_0051F.1_g029490 Hydrangea macrophylla HOM05D000388 ORTHO05D009843 2.8e-42 174.9 88 95.5
BcaC04g20699 Brassica carinata HOM05D000388 ORTHO05D009843 8.2e-42 173.3 88 92.0
RcHm_v2.0_Chr3g0491801 Rosa chinensis HOM05D000388 ORTHO05D009843 8.2e-42 173.3 88 92.0
Sed0009296 Sechium edule HOM05D000388 ORTHO05D009843 1.4e-41 172.6 88 93.2
Sed0020360 Sechium edule HOM05D000388 ORTHO05D009843 1.4e-41 172.6 88 93.2
Gohir.D08G129080 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.8e-41 172.2 88 93.2
Nn020s41509 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.8e-41 172.2 88 94.3
Nn055s41931 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.8e-41 172.2 88 94.3
Nn082s42681 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.8e-41 172.2 88 94.3
Nn287s46145 Nelumbo nucifera HOM05D000388 ORTHO05D009843 1.8e-41 172.2 88 94.3
CARHR281990 Cardamine hirsuta HOM05D000388 ORTHO05D009843 2.4e-41 171.8 88 90.9
Potri.013G142336 Populus trichocarpa HOM05D000388 ORTHO05D009843 3.1e-41 171.4 88 93.2
HanXRQChr00c0272g0573001 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr00c0439g0574751 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr02g0041691 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr04g0099341 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr05g0151391 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr07g0201051 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr08g0210251 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr10g0282451 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQChr11g0326691 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
HanXRQCPg0579911 Helianthus annuus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
Lalb_Chr23g0270511 Lupinus albus HOM05D000388 ORTHO05D009843 4.1e-41 171.0 88 93.2
AL2G20790 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 7.0e-41 170.2 88 90.9
ATCG00330 Arabidopsis thaliana HOM05D000388 ORTHO05D009843 7.0e-41 170.2 88 90.9
BNapus_Darmor_BZH_scaffold_253p00110 Brassica napus HOM05D000388 ORTHO05D009843 1.2e-40 169.5 88 90.9
BNapus_Darmor_BZH_scaffold_287p00030 Brassica napus HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
C09p40130 Brassica napus HOM05D000388 ORTHO05D009843 1.2e-40 169.5 88 90.9
BolC7t41727H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
BolSC29t60455H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
BolSC45t60943H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
BolSC46t60990H Brassica oleracea HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
BraSC140t45581Z Brassica rapa HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
BraSC151t45706Z Brassica rapa HOM05D000388 ORTHO05D009843 1.2e-40 169.5 88 90.9
BraSC179t45796Z Brassica rapa HOM05D000388 ORTHO05D000473 1.2e-40 169.5 88 90.9
PGR111G0009 Punica granatum HOM05D000388 ORTHO05D009843 1.5e-40 169.1 88 92.0
CAN.G142.10 Capsicum annuum HOM05D000388 ORTHO05D009843 4.5e-40 167.5 88 92.0
CAN.G500.81 Capsicum annuum HOM05D000388 ORTHO05D009843 4.5e-40 167.5 88 92.0
CAN.G653.5 Capsicum annuum HOM05D000388 ORTHO05D009843 4.5e-40 167.5 88 92.0
PSO548G0009 Papaver somniferum HOM05D000388 ORTHO05D009843 7.7e-40 166.8 88 90.9
LjContig00318g0006350 Lotus japonicus HOM05D000388 ORTHO05D009843 1.0e-39 166.4 88 89.8
Gohir.A03G019500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.7e-39 165.6 88 90.9
Thhalv10011029m.g Eutrema salsugineum HOM05D000388 ORTHO05D009843 2.9e-39 164.9 88 89.8
DCAR_032482 Daucus carota HOM05D000388 ORTHO05D009843 8.5e-39 163.3 88 89.8
LjContig00489g0027265 Lotus japonicus HOM05D000388 ORTHO05D009843 8.5e-39 163.3 87 88.5
Solyc00g500055.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.1e-38 162.9 86 91.9
Solyc00g500137.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.1e-38 162.9 86 91.9
Solyc00g500207.1 Solanum lycopersicum HOM05D000388 ORTHO05D009843 1.1e-38 162.9 86 91.9
Gohir.A05G086166 Gossypium hirsutum HOM05D000388 ORTHO05D009843 4.2e-38 161.0 88 88.6
AL2G21360 Arabidopsis lyrata HOM05D000388 ORTHO05D009843 5.5e-38 160.6 86 88.4
TWI15G0535 Tripterygium wilfordii HOM05D000388 ORTHO05D009843 1.2e-37 159.5 88 87.5
A06p23300 Brassica napus HOM05D000388 ORTHO05D000473 6.1e-37 157.1 84 86.9
Gohir.D09G055500 Gossypium hirsutum HOM05D000388 ORTHO05D009843 1.0e-36 156.4 88 85.2
Gohir.A01G140300 Gossypium hirsutum HOM05D000388 ORTHO05D009843 5.2e-36 154.1 88 84.1
BolC9t56909H Brassica oleracea HOM05D000388 ORTHO05D009843 8.8e-36 153.3 81 88.9
CAN.G679.7 Capsicum annuum HOM05D000388 ORTHO05D009843 1.5e-35 152.5 88 85.2
arahy.Tifrunner.gnm1.ann1.6B1C4L Arachis hypogaea HOM05D000388 ORTHO05D009843 2.0e-35 152.1 85 87.1
Sed0021792 Sechium edule HOM05D000388 ORTHO05D009843 5.7e-35 150.6 88 83.0
Medtr3g035610 Medicago truncatula HOM05D000388 ORTHO05D009843 1.3e-34 149.4 88 84.1
Gohir.A01G164720 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.2e-34 148.7 88 84.1
Oeu062844.1 Olea europaea HOM05D000388 ORTHO05D009843 2.8e-34 148.3 86 83.7
EL10Ac1g02280 Beta vulgaris HOM05D000388 ORTHO05D009843 3.7e-34 147.9 88 85.2
TAR629G1277 Trochodendron aralioides HOM05D000388 ORTHO05D009843 1.8e-33 145.6 73 95.9
Eucgr.C02020 Eucalyptus grandis HOM05D000388 ORTHO05D009843 1.6e-32 142.5 88 80.7
CAN.G386.18 Capsicum annuum HOM05D000388 ORTHO05D000473 2.0e-32 142.1 74 90.5
Oeu017222.1 Olea europaea HOM05D000388 ORTHO05D009843 3.5e-32 141.4 88 79.5
Peaxi162Scf00575g00006 Petunia axillaris HOM05D000388 ORTHO05D009843 5.9e-32 140.6 70 92.9
Nitab4.5_0025922g0010 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.3e-31 139.4 73 91.8
Nitab4.5_0007186g0040 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.9e-30 135.6 73 89.0
Hund28396 Selenicereus undatus HOM05D000388 ORTHO05D009843 1.9e-30 135.6 74 89.2
BolSC44t60854H Brassica oleracea HOM05D000388 ORTHO05D009843 1.6e-29 132.5 67 89.6
SEGI_01256 Sequoiadendron giganteum HOM05D000388 ORTHO05D009843 3.6e-29 131.3 88 71.6
arahy.Tifrunner.gnm1.ann1.FC7Y3W Arachis hypogaea HOM05D000388 ORTHO05D009843 6.1e-29 130.6 72 87.5
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 1.2e-27 126.3 66 92.4
HanXRQChr00c0345g0573851 Helianthus annuus HOM05D000388 ORTHO05D009843 1.1e-25 119.8 56 98.2
Peaxi162Scf00455g00046 Petunia axillaris HOM05D000388 ORTHO05D009843 9.1e-25 116.7 63 87.3
SMO086G0040 Selaginella moellendorffii HOM05D000388 ORTHO05D009843 4.5e-24 114.4 87 62.1
Gohir.A07G155821 Gossypium hirsutum HOM05D000388 ORTHO05D009843 2.9e-23 111.7 60 88.3
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 2.0e-19 99.0 56 83.9
Phvul.010G068900 Phaseolus vulgaris HOM05D000388 ORTHO05D009843 2.0e-19 99.0 48 93.8
EL10As15g24141 Beta vulgaris HOM05D000388 ORTHO05D009843 4.1e-17 91.3 51 88.2
Medtr5g063380 Medicago truncatula HOM05D000388 ORTHO05D009843 1.6e-16 89.4 48 87.5
Nitab4.5_0002607g0050 Nicotiana tabacum HOM05D000388 ORTHO05D009843 1.7e-15 85.9 49 85.7
CsaV3_6G032160 Cucumis sativus L. HOM05D000388 ORTHO05D009843 2.3e-15 85.5 83 59.0
HanXRQChr16g0506261 Helianthus annuus HOM05D000388 ORTHO05D009843 2.8e-13 78.6 44 86.4
arahy.Tifrunner.gnm1.ann1.A3NG1I Arachis hypogaea HOM05D000388 ORTHO05D009843 4.7e-13 77.8 53 71.7
arahy.Tifrunner.gnm1.ann1.90KAHV Arachis hypogaea HOM05D000388 ORTHO05D009843 2.2e-10 68.9 91 48.4
Sopen10g013070 Solanum pennellii HOM05D000388 ORTHO05D009843 2.2e-10 68.9 33 90.9
Hund29903 Selenicereus undatus HOM05D000388 ORTHO05D009843 2.7e-08 62.0 38 84.2
BolC9t56932H Brassica oleracea HOM05D000388 ORTHO05D009843 7.8e-08 60.5 26 100.0
Medtr8g079770 Medicago truncatula HOM05D000388 ORTHO05D009843 2.3e-07 58.9 38 76.3
arahy.Tifrunner.gnm1.ann1.EPB7VR Arachis hypogaea HOM05D000176 ORTHO05D000106 1.9e-06 55.8 27 88.9
ClCG08G008070 Citrullus lanatus HOM05D007099 ORTHO05D009081 1.9e-06 55.8 89 39.3
Sed0026927 Sechium edule HOM05D007099 ORTHO05D009081 2.5e-06 55.5 89 39.3
EL10Ac3g05283 Beta vulgaris HOM05D007099 ORTHO05D009081 4.3e-06 54.7 90 42.2
Hund03588 Selenicereus undatus HOM05D007099 ORTHO05D009081 5.6e-06 54.3 87 40.2
Hund07474 Selenicereus undatus HOM05D007099 ORTHO05D009081 5.6e-06 54.3 87 40.2
CAN.G371.64 Capsicum annuum HOM05D007099 ORTHO05D009081 9.5e-06 53.5 87 37.9


User provided reference genes

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