Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.4e-86 322.8 152 100.0
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.6e-77 291.2 152 89.5
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.0e-77 290.8 152 90.1
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.8e-76 289.3 152 88.8
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.8e-74 282.0 152 86.8
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.4e-46 189.9 145 62.8
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.0e-35 152.9 147 49.7
CiPaw.09G138400 Carya illinoinensis HOM05D010787 ORTHO05D011812 6.3e-34 147.9 111 65.8
CiPaw.13G180200 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.5e-32 141.7 140 50.7
CiPaw.14G122000 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.5e-32 141.7 144 52.1
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.7e-31 139.8 128 61.7
CiPaw.10G039300 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.2e-28 128.3 109 56.9
vmacro11319 Vaccinium macrocarpon HOM05D010787 ORTHO05D011812 2.0e-27 126.3 232 37.5
Rhsim08G0121300 Rhododendron simsii HOM05D010787 ORTHO05D011812 2.8e-18 95.9 82 58.5
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.5e-14 80.9 114 41.2
Rhsim01G0035000 Rhododendron simsii HOM05D018834 ORTHO05D011812 3.6e-13 79.0 129 39.5
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.5e-11 73.6 125 36.8
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.5e-11 73.6 135 33.3
Rhsim08G0120900 Rhododendron simsii HOM05D010787 ORTHO05D011812 4.4e-11 72.0 68 57.4
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-10 70.5 124 37.1
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-10 70.1 124 37.9
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-10 70.1 124 37.9
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-10 69.3 104 40.4
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.3e-10 67.8 124 37.1
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 3.2e-09 65.9 131 35.1
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 4.1e-09 65.5 128 31.2
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 7.0e-09 64.7 118 36.4
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 9.2e-09 64.3 118 36.4
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 7.8e-08 61.2 106 38.7
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 7.8e-08 61.2 108 37.0
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 1.3e-07 60.5 104 38.5
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 3.9e-07 58.9 94 40.4
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 3.9e-07 58.9 94 40.4
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 3.9e-07 58.9 119 35.3
Carub.0002s0168 Capsella rubella HOM05D007210 ORTHO05D006152 5.0e-07 58.5 113 32.7
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 5.0e-07 58.5 126 34.9
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 8.6e-07 57.8 111 32.4
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.5e-06 57.0 98 38.8
Rhsim01G0024300 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.5e-06 57.0 77 42.9
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 1.9e-06 56.6 98 38.8
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 1.9e-06 56.6 112 36.6
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 2.5e-06 56.2 94 37.2
Carub.0002s0167 Capsella rubella HOM05D007210 ORTHO05D006152 3.3e-06 55.8 137 29.9
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 3.3e-06 55.8 125 30.4
Rhsim03G0156400 Rhododendron simsii HOM05D010787 ORTHO05D011812 4.3e-06 55.5 45 62.2
Rhsim06G0044600 Rhododendron simsii HOM05D009663 ORTHO05D007789 4.3e-06 55.5 113 28.3
vmacro16067 Vaccinium macrocarpon HOM05D028256 ORTHO05D000283 4.3e-06 55.5 99 38.4
Duzib187G0243 Durio zibethinus HOM05D016489 ORTHO05D007789 7.3e-06 54.7 112 32.1
Peaxi162Scf00270g00516 Petunia axillaris HOM05D008744 ORTHO05D010647 9.5e-06 54.3 96 37.5


User provided reference genes

Program Settings