Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.3e-115 418.3 203 100.0
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.3e-106 387.1 203 91.1
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.1e-97 358.6 189 90.5
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.1e-94 350.1 203 83.3
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.1e-76 288.9 152 90.1
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.3e-54 215.3 189 58.7
CiPaw.09G138400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.8e-39 166.8 153 60.1
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.1e-37 159.8 153 51.0
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 2.2e-34 149.8 166 54.2
CiPaw.13G180200 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.1e-33 144.8 153 48.4
vmacro11319 Vaccinium macrocarpon HOM05D010787 ORTHO05D011812 1.3e-31 140.6 275 36.7
CiPaw.14G122000 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.9e-31 139.0 151 49.7
CiPaw.10G039300 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.6e-27 124.8 109 56.0
Rhsim08G0121300 Rhododendron simsii HOM05D010787 ORTHO05D011812 3.8e-18 95.9 82 59.8
CiPaw.10G106700 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.2e-17 92.4 72 70.8
CSS0009631 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-14 84.3 146 37.7
Rhsim01G0035000 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.3e-13 80.9 134 38.1
TWI36G0009 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 6.3e-13 78.6 136 36.8
Rhsim01G0028600 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.1e-12 77.8 125 39.2
Rhsim01G0028900 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.4e-12 77.4 125 39.2
TWI36G0661 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.4e-12 76.6 133 34.6
Rhsim08G0120900 Rhododendron simsii HOM05D010787 ORTHO05D011812 1.5e-11 73.9 68 60.3
CSS0008461 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.3e-10 70.9 131 37.4
CSS0021925 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.7e-10 70.5 144 38.2
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-10 69.7 136 37.5
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.9e-10 69.7 133 39.1
CSS0027810 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 3.8e-10 69.3 129 36.4
CSS0000671 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.0e-10 68.9 131 37.4
CSS0007245 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.0e-10 68.9 131 37.4
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 5.0e-10 68.9 129 37.2
PGR142G3708 Punica granatum HOM05D008623 ORTHO05D007789 8.5e-10 68.2 121 38.0
CSS0032446 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.1e-09 67.8 143 36.4
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.1e-09 67.8 128 33.6
CSS0013123 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.4e-09 67.4 143 36.4
CSS0006348 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.9e-09 67.0 132 37.1
Dinv01175 Davidia involucrata HOM05D008623 ORTHO05D007789 1.9e-09 67.0 118 37.3
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 1.9e-09 67.0 118 37.3
Rhsim12G0199400 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.2e-09 66.2 131 35.9
Rhsim04G0228600 Rhododendron simsii HOM05D009663 ORTHO05D011812 5.5e-09 65.5 127 33.1
CSS0009704 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 9.4e-09 64.7 135 36.3
Duzib168G1555 Durio zibethinus HOM05D016489 ORTHO05D007789 3.6e-08 62.8 133 35.3
Duzib168G1026 Durio zibethinus HOM05D016489 ORTHO05D007789 4.7e-08 62.4 148 35.1
Duzib168G2238 Durio zibethinus HOM05D016489 ORTHO05D007789 4.7e-08 62.4 148 35.1
RhsimUnG0120400 Rhododendron simsii HOM05D009663 ORTHO05D007789 6.1e-08 62.0 157 32.5
Peaxi162Scf00555g00913 Petunia axillaris HOM05D008744 ORTHO05D010647 1.4e-07 60.8 125 34.4
Rhsim12G0034900 Rhododendron simsii HOM05D042119 ORTHO05D007789 1.4e-07 60.8 139 35.3
RhsimUnG0148900 Rhododendron simsii HOM05D009663 ORTHO05D011812 1.8e-07 60.5 111 35.1
CSS0033613 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.3e-07 60.1 120 39.2
Actinidia14014 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.0e-07 59.7 106 36.8
Actinidia04665 Actinidia chinensis HOM05D008623 ORTHO05D010647 3.9e-07 59.3 106 36.8
PGR142G1144 Punica granatum HOM05D008623 ORTHO05D007789 3.9e-07 59.3 120 35.8
Rhsim13G0019200 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.9e-07 59.3 126 30.2
Peaxi162Scf00000g00013 Petunia axillaris HOM05D008744 ORTHO05D010647 5.1e-07 58.9 125 33.6
Sed0001543 Sechium edule HOM05D008623 ORTHO05D007789 6.7e-07 58.5 134 33.6
CSS0006926 Camellia sinensis var. sinensis HOM05D019829 ORTHO05D007789 1.1e-06 57.8 95 41.1
BcaB01g04428 Brassica carinata HOM05D007210 ORTHO05D006152 1.5e-06 57.4 135 33.3
CSS0008468 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.5e-06 57.4 112 40.2
TWI36G0611 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 2.0e-06 57.0 125 32.0
BcaB01g04427 Brassica carinata HOM05D007210 ORTHO05D006152 2.6e-06 56.6 160 32.5
CSS0011935 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 2.6e-06 56.6 109 41.3
Rhsim03G0156400 Rhododendron simsii HOM05D010787 ORTHO05D011812 2.6e-06 56.6 45 64.4
RhsimUnG0120300 Rhododendron simsii HOM05D009663 ORTHO05D007789 3.3e-06 56.2 128 32.8
BcaNung03124 Brassica carinata HOM05D002666 ORTHO05D004769 4.4e-06 55.8 147 29.3
BraA01t00634Z Brassica rapa HOM05D002666 ORTHO05D004769 4.4e-06 55.8 153 30.1
CSS0005018 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 5.7e-06 55.5 120 34.2
CARHR208050 Cardamine hirsuta HOM05D008885 ORTHO05D006152 5.7e-06 55.5 129 35.7
Thhalv10015529m.g Eutrema salsugineum HOM05D008885 ORTHO05D006152 5.7e-06 55.5 133 35.3
vmacro16067 Vaccinium macrocarpon HOM05D028256 ORTHO05D000283 7.4e-06 55.1 110 37.3


User provided reference genes

Program Settings