Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 4.4e-187 657.9 357 100.0
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 3.1e-84 316.2 365 57.3
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 1.9e-81 307.0 381 54.1
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 9.2e-76 288.1 529 41.2
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 3.1e-71 273.1 363 51.5
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 4.8e-40 169.5 378 40.5
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 1.1e-39 168.3 376 38.0
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 1.7e-37 161.0 363 37.7
Prupe.4G073200 Prunus persica HOM05D014736 ORTHO05D009761 2.9e-37 160.2 361 37.7
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 2.4e-36 157.1 364 39.3
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.5e-33 147.9 363 38.8
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 7.4e-33 145.6 365 36.4
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 3.7e-32 143.3 365 34.8
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 1.4e-31 141.4 371 38.3
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 4.0e-31 139.8 363 36.4
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 1.2e-30 138.3 403 35.0
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.2e-30 138.3 370 32.7
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 2.6e-30 137.1 326 35.0
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 3.4e-30 136.7 370 32.4
Potri.001G354600 Populus trichocarpa HOM05D009852 ORTHO05D009761 6.4e-29 132.5 345 35.9
Lalb_Chr23g0275971 Lupinus albus HOM05D009013 ORTHO05D009761 1.1e-28 131.7 361 34.9
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 4.6e-27 126.3 363 36.6
Thecc.06G158200 Theobroma cacao HOM05D009852 ORTHO05D009761 3.0e-26 123.6 365 34.0
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 2.5e-25 120.6 380 32.4
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 7.4e-25 119.0 364 34.6
Phvul.002G244200 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.3e-24 118.2 362 35.1
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 2.8e-24 117.1 365 34.8
VMungo0251G0903 Vigna mungo HOM05D009013 ORTHO05D009761 2.4e-23 114.0 361 33.8
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 4.0e-23 113.2 472 30.1
Lj6g0000102 Lotus japonicus HOM05D009013 ORTHO05D009761 9.0e-23 112.1 386 33.7
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 1.5e-22 111.3 368 35.1
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 3.4e-22 110.2 358 34.6
Sabra11G0072300 Salix brachista HOM05D009852 ORTHO05D009761 3.4e-22 110.2 405 32.8
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 1.0e-21 108.6 365 34.2
Lalb_Chr13g0295461 Lupinus albus HOM05D009013 ORTHO05D009761 1.7e-21 107.8 362 32.0
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 2.9e-21 107.1 261 41.0
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 3.8e-21 106.7 364 34.3
Sabra16G0233200 Salix brachista HOM05D009852 ORTHO05D009761 3.8e-21 106.7 360 32.5
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 2.5e-20 104.0 362 33.7
Psat1g018200 Pisum sativum HOM05D009013 ORTHO05D009761 4.2e-20 103.2 357 30.0
ClCG03G007220 Citrullus lanatus HOM05D025335 ORTHO05D025087 9.3e-20 102.1 374 32.9
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.7e-19 100.5 361 33.2
Duzib235G1088 Durio zibethinus HOM05D009852 ORTHO05D009761 3.5e-19 100.1 416 31.0
CsaV3_1G032810 Cucumis sativus L. HOM05D025335 ORTHO05D025087 4.6e-19 99.8 368 32.9
Duzib160G0535 Durio zibethinus HOM05D009852 ORTHO05D009761 4.6e-19 99.8 359 32.3
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 4.6e-19 99.8 369 31.7
Gorai.009G158300 Gossypium raimondii HOM05D009852 ORTHO05D009761 7.9e-19 99.0 362 30.9
MELO3C002700.2 Cucumis melo HOM05D025335 ORTHO05D025087 1.3e-18 98.2 368 33.2
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 1.8e-18 97.8 378 30.4
Gohir.D05G154000 Gossypium hirsutum HOM05D009852 ORTHO05D009761 2.3e-18 97.4 362 30.9
FAN11G2258 Fragaria x ananassa HOM05D014736 ORTHO05D009761 3.3e-17 93.6 189 39.7
FAN21G2246 Fragaria x ananassa HOM05D014736 ORTHO05D009761 1.6e-16 91.3 432 31.2
MD10G1268000 Malus domestica HOM05D014736 ORTHO05D009761 3.7e-16 90.1 270 31.5
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 3.7e-16 90.1 275 36.4
Gohir.A06G135400 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.8e-16 89.7 257 35.4
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 8.2e-16 89.0 437 27.5
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 3.1e-15 87.0 370 30.5
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 4.1e-15 86.7 376 31.1
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 4.1e-15 86.7 336 29.5
arahy.Tifrunner.gnm1.ann1.3YWF5K Arachis hypogaea HOM05D009013 ORTHO05D009761 5.3e-15 86.3 362 30.4
TPR.G31355 Trifolium pratense HOM05D009013 ORTHO05D009761 1.2e-14 85.1 365 30.1
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 4.5e-14 83.2 364 30.8
FAN25G1841 Fragaria x ananassa HOM05D014736 ORTHO05D009761 4.5e-14 83.2 428 30.1
arahy.Tifrunner.gnm1.ann1.5V604V Arachis hypogaea HOM05D009013 ORTHO05D009761 5.9e-14 82.8 361 29.9
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 5.9e-14 82.8 358 30.7
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 1.0e-13 82.0 358 29.3
MD05G1292200 Malus domestica HOM05D014736 ORTHO05D009761 1.7e-13 81.3 265 31.7
COL.COLO4_22804 Corchorus olitorius HOM05D009852 ORTHO05D009761 3.8e-13 80.1 330 29.4
Gohir.A05G151600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 5.0e-13 79.7 361 29.1
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 8.5e-13 79.0 361 30.7
Sed0021783 Sechium edule HOM05D025335 ORTHO05D025087 1.4e-12 78.2 359 30.1
Psat1g020440 Pisum sativum HOM05D009013 ORTHO05D009761 2.1e-11 74.3 314 34.4
FvH4_3g06440 Fragaria vesca HOM05D014736 ORTHO05D009761 2.7e-11 73.9 430 29.1
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 7.9e-11 72.4 148 42.6
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 7.9e-11 72.4 434 28.1
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.3e-10 71.6 366 26.2
TPR.G22001 Trifolium pratense HOM05D009013 ORTHO05D009761 2.3e-10 70.9 333 30.9
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 5.1e-10 69.7 428 27.1
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 6.7e-10 69.3 357 27.5
Sed0003972 Sechium edule HOM05D025335 ORTHO05D025087 1.1e-09 68.6 365 28.5
Eucgr.D00345 Eucalyptus grandis HOM05D014736 ORTHO05D009761 3.3e-09 67.0 327 31.2
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 7.4e-09 65.9 412 26.2
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 2.2e-08 64.3 380 28.4
AUR62035804 Chenopodium quinoa HOM05D018558 ORTHO05D018254 2.2e-08 64.3 365 27.7
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 2.2e-08 64.3 358 27.4
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 6.3e-08 62.8 305 27.5
EL10Ac8g19799 Beta vulgaris HOM05D018558 ORTHO05D018254 1.4e-07 61.6 369 28.5
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.8e-07 61.2 345 29.0
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 2.4e-07 60.8 282 25.2
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 2.0e-06 57.8 265 28.7
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 7.7e-06 55.8 397 28.2


User provided reference genes

Program Settings