Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 4.9e-120 434.5 219 100.0
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.3e-109 399.8 219 90.0
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 1.9e-100 369.4 217 82.5
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 3.1e-98 362.1 219 83.1
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 2.4e-95 352.4 247 74.1
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 2.4e-95 352.4 225 80.0
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 5.4e-95 351.3 206 85.4
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 1.2e-94 350.1 223 79.4
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 1.6e-94 349.7 219 80.8
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 2.7e-94 349.0 217 79.7
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 4.6e-94 348.2 217 77.4
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 6.0e-94 347.8 217 79.7
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 3.0e-93 345.5 217 78.3
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 6.6e-93 344.4 221 79.2
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 8.6e-93 344.0 221 79.2
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 3.3e-92 342.0 218 76.6
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 4.3e-92 341.7 217 78.3
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 9.6e-92 340.5 218 77.1
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 2.1e-91 339.3 223 77.1
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 3.6e-91 338.6 224 78.1
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 8.1e-91 337.4 217 76.0
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 1.4e-90 336.7 217 76.0
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 1.4e-90 336.7 223 73.5
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 1.4e-90 336.7 217 77.0
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.8e-90 336.3 216 75.9
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 4.0e-90 335.1 213 74.2
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.2e-90 334.7 215 75.8
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 6.8e-90 334.3 215 75.3
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 6.8e-90 334.3 215 75.8
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 6.8e-90 334.3 217 75.1
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 8.9e-90 334.0 217 75.6
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 1.2e-89 333.6 217 76.0
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 2.0e-89 332.8 217 75.1
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 2.6e-89 332.4 214 76.2
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 3.4e-89 332.0 227 72.7
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 3.4e-89 332.0 216 73.6
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 4.4e-89 331.6 217 77.0
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 2.2e-88 329.3 219 73.5
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 2.9e-88 328.9 218 74.8
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 2.9e-88 328.9 219 75.8
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.8e-88 328.6 215 74.4
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 3.8e-88 328.6 221 74.7
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 1.4e-87 326.6 218 73.4
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 2.4e-87 325.9 217 73.3
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 2.4e-87 325.9 220 74.1
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 4.2e-87 325.1 220 73.6
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 4.2e-87 325.1 216 72.2
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 5.4e-87 324.7 224 75.4
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 7.1e-87 324.3 217 74.2
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 9.3e-87 323.9 217 71.4
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 9.3e-87 323.9 214 74.3
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.2e-86 323.6 217 73.3
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 1.6e-86 323.2 220 73.6
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 2.1e-86 322.8 216 71.3
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 3.5e-86 322.0 216 73.1
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 3.5e-86 322.0 220 73.2
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 3.5e-86 322.0 218 74.8
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 6.0e-86 321.2 218 72.0
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 7.8e-86 320.9 221 72.4
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 1.3e-85 320.1 225 69.8
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 1.3e-85 320.1 216 72.2
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 2.3e-85 319.3 217 74.2
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 3.0e-85 318.9 219 72.1
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 3.0e-85 318.9 217 71.9
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 3.9e-85 318.5 224 69.6
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 3.9e-85 318.5 216 70.8
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 6.6e-85 317.8 218 71.6
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 8.7e-85 317.4 220 70.9
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 8.7e-85 317.4 237 67.5
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.5e-84 316.6 261 61.3
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 3.3e-84 315.5 224 73.7
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 4.3e-84 315.1 217 68.7
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.3e-84 314.3 227 72.2
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.3e-83 313.5 220 72.3
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 1.6e-83 313.2 217 74.2
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 1.6e-83 313.2 225 68.0
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 1.6e-83 313.2 222 70.3
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 2.4e-82 309.3 220 68.6
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 5.8e-81 304.7 243 66.3
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 1.7e-80 303.1 211 73.0
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 2.9e-80 302.4 219 67.6
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 1.1e-79 300.4 257 63.0
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.4e-79 300.1 221 64.3
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.9e-79 299.7 218 68.3
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 1.9e-79 299.7 217 66.4
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.4e-79 299.3 218 68.3
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 3.2e-79 298.9 222 68.0
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 7.1e-79 297.7 234 61.5
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.2e-78 297.0 225 67.1
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 2.7e-78 295.8 221 64.3
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 2.7e-78 295.8 222 63.5
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 2.7e-78 295.8 220 63.6
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 6.0e-78 294.7 221 62.9
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 6.0e-78 294.7 221 63.3
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 1.0e-77 293.9 221 63.3
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 1.0e-77 293.9 221 63.3
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 1.3e-77 293.5 218 63.3
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 1.3e-77 293.5 215 63.7
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 5.1e-77 291.6 222 62.6
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 5.1e-77 291.6 222 62.6
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.5e-76 289.3 202 69.3
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 2.5e-76 289.3 188 76.6
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 5.6e-76 288.1 214 68.7
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 2.8e-75 285.8 221 61.5
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 4.8e-75 285.0 250 60.0
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.1e-74 283.9 197 69.5
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 4.0e-74 282.0 217 63.6
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 5.3e-74 281.6 225 61.8
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 4.5e-73 278.5 158 83.5
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 5.8e-73 278.1 223 61.9
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 2.2e-72 276.2 211 66.4
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 6.0e-70 268.1 183 73.8
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 6.7e-69 264.6 220 63.6
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.4e-63 246.9 218 60.1
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 4.2e-63 245.4 191 66.5
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.1e-58 230.7 222 60.4
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 1.4e-58 230.3 238 49.6
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 9.0e-58 227.6 121 86.0
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 9.0e-58 227.6 220 52.7
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 7.2e-55 218.0 132 71.2
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.5e-52 210.3 113 85.0
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 2.6e-49 199.5 238 47.1
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 5.9e-49 198.4 245 45.3
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 8.5e-48 194.5 207 48.3
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 5.5e-39 165.2 100 76.0
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.1e-38 163.3 172 51.7
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 2.8e-35 152.9 251 35.9
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 6.5e-32 141.7 246 40.2
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 3.2e-31 139.4 178 44.4
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 4.2e-15 85.9 85 57.6
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 2.1e-14 83.6 42 90.5
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 5.4e-10 68.9 36 83.3
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 7.0e-10 68.6 42 66.7
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 1.6e-09 67.4 38 76.3
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 4.3e-07 59.3 213 26.3
QL10p020720 Quercus lobata HOM05D005618 ORTHO05D337099 7.3e-07 58.5 37 78.4
QL10p031514 Quercus lobata HOM05D005618 ORTHO05D337805 7.3e-07 58.5 38 78.9
AT1G30060 Arabidopsis thaliana HOM05D008497 ORTHO05D003355 4.7e-06 55.8 28 85.7
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 6.1e-06 55.5 46 60.9


User provided reference genes

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