Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G090600 Carya illinoinensis HOM05D007074 ORTHO05D008542 1.4e-137 493.0 258 100.0
QL05p057294 Quercus lobata HOM05D007074 ORTHO05D008542 3.7e-42 176.0 240 51.7
Cfa000927 Carpinus fangiana HOM05D007074 ORTHO05D008542 1.5e-40 170.6 251 53.0
Thecc.06G148300 Theobroma cacao HOM05D007074 ORTHO05D008542 2.2e-39 166.8 261 46.0
CiPaw.09G122000 Carya illinoinensis HOM05D007074 ORTHO05D008542 2.7e-37 159.8 252 46.4
Prupe.4G082900 Prunus persica HOM05D007074 ORTHO05D008542 3.6e-37 159.5 264 45.5
MD05G1281700 Malus domestica HOM05D007074 ORTHO05D008542 5.1e-36 155.6 245 47.8
MD10G1260500 Malus domestica HOM05D007074 ORTHO05D008542 2.0e-35 153.7 246 45.1
Ciclev10017572m.g Citrus clementina HOM05D007074 ORTHO05D008542 2.5e-35 153.3 261 43.7
COL.COLO4_31042 Corchorus olitorius HOM05D007074 ORTHO05D008542 1.8e-33 147.1 242 45.0
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla HOM05D007074 ORTHO05D008542 7.7e-32 141.7 231 46.3
Manes.15G123200 Manihot esculenta HOM05D007074 ORTHO05D008542 2.9e-31 139.8 248 43.1
Manes.17G071900 Manihot esculenta HOM05D007074 ORTHO05D008542 2.5e-30 136.7 247 40.5
TPR.G26250 Trifolium pratense HOM05D007074 ORTHO05D008542 2.1e-29 133.7 259 36.7
Duzib235G1065 Durio zibethinus HOM05D007074 ORTHO05D008542 6.1e-29 132.1 249 43.0
Glyma.13G219300 Glycine max HOM05D007074 ORTHO05D008542 3.0e-28 129.8 250 41.2
Atru.chr10.1177 Acer truncatum HOM05D007074 ORTHO05D008542 3.9e-28 129.4 272 41.2
Glyma.15G092900 Glycine max HOM05D007074 ORTHO05D008542 1.1e-27 127.9 252 42.1
Psat1g191160 Pisum sativum HOM05D007074 ORTHO05D008542 2.0e-27 127.1 256 40.2
Gorai.009G154100 Gossypium raimondii HOM05D007074 ORTHO05D008542 3.3e-27 126.3 260 39.2
Gohir.D05G150000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 7.4e-27 125.2 260 39.2
Medtr2g019160 Medicago truncatula HOM05D007074 ORTHO05D008542 9.7e-27 124.8 254 38.2
TWI53G1156 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 1.7e-26 124.0 252 40.1
TWI73G0984 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 1.7e-26 124.0 255 40.8
Psat1g191080 Pisum sativum HOM05D007074 ORTHO05D008542 2.2e-26 123.6 242 38.4
Oeu034132.1 Olea europaea HOM05D007074 ORTHO05D008542 4.8e-26 122.5 253 39.5
Gorai.010G167100 Gossypium raimondii HOM05D007074 ORTHO05D008542 6.3e-26 122.1 237 40.5
Lalb_Chr20g0117821 Lupinus albus HOM05D007074 ORTHO05D008542 8.2e-26 121.7 275 36.4
Gohir.A05G147500 Gossypium hirsutum HOM05D007074 ORTHO05D008542 1.1e-25 121.3 261 38.3
Phvul.006G166000 Phaseolus vulgaris HOM05D007074 ORTHO05D008542 4.1e-25 119.4 237 38.8
Dinv05217 Davidia involucrata HOM05D007074 ORTHO05D008542 2.0e-24 117.1 167 46.7
Eucgr.E02421 Eucalyptus grandis HOM05D007074 ORTHO05D008542 5.9e-24 115.5 239 38.9
Migut.M00897 Erythranthe guttata HOM05D007074 ORTHO05D008542 1.0e-23 114.8 238 35.7
Nn3g20397 Nelumbo nucifera HOM05D007074 ORTHO05D008542 1.0e-23 114.8 265 36.2
THA.LOC104814307 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 1.3e-23 114.4 260 35.8
Gohir.D06G143401 Gossypium hirsutum HOM05D007074 ORTHO05D008542 3.8e-23 112.8 224 40.2
PGR031G2887 Punica granatum HOM05D007074 ORTHO05D008542 1.1e-22 111.3 241 36.1
Lj6g0018330 Lotus japonicus HOM05D007074 ORTHO05D008542 1.5e-22 110.9 268 36.2
FAN25G3808 Fragaria x ananassa HOM05D007074 ORTHO05D008542 3.2e-22 109.8 265 35.1
FAN21G0051 Fragaria x ananassa HOM05D007074 ORTHO05D008542 4.2e-22 109.4 267 35.2
Potri.004G065300 Populus trichocarpa HOM05D007074 ORTHO05D008542 7.2e-22 108.6 270 34.4
FAN16G0984 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.1e-21 107.1 262 35.1
CARHR029240 Cardamine hirsuta HOM05D007074 ORTHO05D008542 2.7e-21 106.7 272 34.6
Gohir.A06G138601 Gossypium hirsutum HOM05D007074 ORTHO05D008542 3.6e-21 106.3 224 39.7
SGA_v2.0_scaffold1478G53958 Striga asiatica HOM05D007074 ORTHO05D008542 1.8e-20 104.0 237 37.6
SGA_v2.0_scaffold1G00191 Striga asiatica HOM05D007074 ORTHO05D008542 1.8e-20 104.0 237 37.6
Gohir.A10G042100 Gossypium hirsutum HOM05D007074 ORTHO05D008542 4.0e-20 102.8 243 37.9
Gohir.D10G043000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 6.7e-20 102.1 243 37.0
BcaB03g13841 Brassica carinata HOM05D007074 ORTHO05D008542 8.8e-20 101.7 248 34.7
Gorai.011G045600 Gossypium raimondii HOM05D007074 ORTHO05D008542 8.8e-20 101.7 243 37.0
Nn4g26598 Nelumbo nucifera HOM05D007074 ORTHO05D008542 1.1e-19 101.3 250 35.6
PGSC0003DMG400021166 Solanum tuberosum HOM05D007074 ORTHO05D008542 3.3e-19 99.8 248 34.7
A09p36350 Brassica napus HOM05D007074 ORTHO05D008542 9.7e-19 98.2 246 34.1
BraA09t39159Z Brassica rapa HOM05D007074 ORTHO05D008542 9.7e-19 98.2 246 34.1
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 2.2e-18 97.1 252 34.1
BolC4t27860H Brassica oleracea HOM05D007074 ORTHO05D008542 4.8e-18 95.9 257 31.9
Thhalv10008361m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 4.8e-18 95.9 261 32.6
A04p26510 Brassica napus HOM05D007074 ORTHO05D008542 6.3e-18 95.5 257 32.3
C04p63930 Brassica napus HOM05D007074 ORTHO05D008542 6.3e-18 95.5 257 32.3
MELO3C002739.2 Cucumis melo HOM05D007074 ORTHO05D008542 6.3e-18 95.5 236 36.0
Carub.0001s2842 Capsella rubella HOM05D007074 ORTHO05D008542 8.2e-18 95.1 266 34.6
BcaB07g32617 Brassica carinata HOM05D007074 ORTHO05D008542 1.8e-17 94.0 279 33.3
BraA04t18155Z Brassica rapa HOM05D007074 ORTHO05D008542 1.8e-17 94.0 256 30.5
vmacro03335 Vaccinium macrocarpon HOM05D001104 ORTHO05D006535 1.8e-17 94.0 249 35.3
BcaC05g27044 Brassica carinata HOM05D007074 ORTHO05D008542 2.4e-17 93.6 259 32.4
C05p29030 Brassica napus HOM05D007074 ORTHO05D008542 2.4e-17 93.6 259 32.4
BolC5t31631H Brassica oleracea HOM05D007074 ORTHO05D008542 2.4e-17 93.6 259 32.4
CsaV3_1G032390 Cucumis sativus L. HOM05D007074 ORTHO05D008542 3.1e-17 93.2 240 36.2
Rhsim13G0115100 Rhododendron simsii HOM05D007074 ORTHO05D008542 3.1e-17 93.2 108 49.1
AL1G44090 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 4.1e-17 92.8 262 34.4
AL700U10010 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 4.1e-17 92.8 262 34.4
Thhalv10017803m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 4.1e-17 92.8 294 31.0
Sp1g26010 Schrenkiella parvula HOM05D007074 ORTHO05D008542 7.0e-17 92.0 255 34.9
A07p10060 Brassica napus HOM05D007074 ORTHO05D008542 9.1e-17 91.7 254 34.6
BraA07t28799Z Brassica rapa HOM05D007074 ORTHO05D008542 9.1e-17 91.7 254 34.6
BcaB06g28786 Brassica carinata HOM05D007074 ORTHO05D008542 1.6e-16 90.9 254 31.9
THA.LOC104820655 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 2.0e-16 90.5 294 31.3
Glyma.08G097500 Glycine max HOM05D007074 ORTHO05D008542 1.7e-15 87.4 241 33.6
AT1G30190 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 5.0e-15 85.9 258 33.3
A05p11040 Brassica napus HOM05D007074 ORTHO05D008542 1.1e-14 84.7 250 30.0
Sp4g16880 Schrenkiella parvula HOM05D007074 ORTHO05D008542 1.1e-14 84.7 271 31.7
BraA05t20049Z Brassica rapa HOM05D007074 ORTHO05D008542 1.9e-14 84.0 250 31.6
Sed0013579 Sechium edule HOM05D007074 ORTHO05D008542 1.0e-12 78.2 236 33.9
Aa31LG10G6790 Aethionema arabicum HOM05D007074 ORTHO05D008542 1.8e-12 77.4 237 32.1
ClCG03G006810 Citrullus lanatus HOM05D007074 ORTHO05D008542 2.3e-12 77.0 219 33.3
Potri.011G083600 Populus trichocarpa HOM05D007074 ORTHO05D008542 2.3e-12 77.0 268 30.2
BcaC02g11538 Brassica carinata HOM05D007074 ORTHO05D008542 3.0e-12 76.6 263 31.9
arahy.Tifrunner.gnm1.ann1.4BL86F Arachis hypogaea HOM05D007074 ORTHO05D008542 4.0e-12 76.3 208 36.5
BcaB02g09522 Brassica carinata HOM05D007074 ORTHO05D008542 4.0e-12 76.3 244 29.9
C04p14170 Brassica napus HOM05D007074 ORTHO05D008542 4.0e-12 76.3 263 31.9
BolC4t23006H Brassica oleracea HOM05D007074 ORTHO05D008542 4.0e-12 76.3 263 31.9
DCAR_003900 Daucus carota HOM05D007074 ORTHO05D008542 4.0e-12 76.3 231 33.3
CANSAT35G1578 Cannabis sativa HOM05D007074 ORTHO05D008542 5.2e-12 75.9 57 66.7
arahy.Tifrunner.gnm1.ann1.0G1Q0G Arachis hypogaea HOM05D007074 ORTHO05D008542 8.8e-12 75.1 275 31.3
Carub.0004s1629 Capsella rubella HOM05D007074 ORTHO05D008542 8.8e-12 75.1 296 26.7
Lalb_Chr18g0055351 Lupinus albus HOM05D007074 ORTHO05D008542 1.5e-11 74.3 261 31.8
MBI02_g24299_MAGBIO Magnolia biondii HOM05D007074 ORTHO05D008542 1.5e-11 74.3 261 29.1
VMungo0540G2047 Vigna mungo HOM05D007074 ORTHO05D008542 1.5e-11 74.3 193 34.2
Ca_00533_v3 Cicer arietinum L. HOM05D007074 ORTHO05D008542 2.0e-11 73.9 218 34.4
AT2G34610 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 2.6e-11 73.6 276 30.4
Aa31LG6G5540 Aethionema arabicum HOM05D007074 ORTHO05D008542 8.3e-10 68.6 78 51.3
CARHR128710 Cardamine hirsuta HOM05D007074 ORTHO05D008542 1.8e-09 67.4 277 27.8
AL4G30590 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 2.4e-09 67.0 272 28.3
AL270U10020 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 4.1e-09 66.2 272 28.3
FvH4_6g37202 Fragaria vesca HOM05D031106 ORTHO05D035407 1.6e-08 64.3 217 30.0
CsaV3_1G032290 Cucumis sativus L. HOM05D035155 ORTHO05D008542 3.5e-08 63.2 230 29.6
Cfa000926 Carpinus fangiana HOM05D007074 ORTHO05D008542 7.7e-08 62.0 135 41.5
Haze_05622 Corylus avellana HOM05D007074 ORTHO05D008542 1.0e-07 61.6 135 41.5
Oeu052361.1 Olea europaea HOM05D007074 ORTHO05D008542 7.2e-06 55.5 94 43.6


User provided reference genes

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