Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.7e-58 228.4 113 100.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 9.1e-46 186.8 113 83.2
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.7e-45 185.3 111 83.8
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.9e-43 179.1 113 78.8
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 3.6e-42 174.9 113 77.0
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 6.1e-42 174.1 113 75.2
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.0e-41 173.3 113 76.1
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 2.3e-41 172.2 111 74.8
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 4.0e-41 171.4 112 76.8
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 6.8e-41 170.6 111 73.9
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 8.8e-41 170.2 111 77.5
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 2.0e-40 169.1 112 75.0
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 7.5e-40 167.2 112 72.3
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 2.2e-39 165.6 111 72.1
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.8e-39 165.2 100 77.0
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 4.8e-39 164.5 112 75.9
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 6.3e-39 164.1 113 73.5
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.1e-38 163.3 100 78.0
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 3.1e-38 161.8 112 71.4
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 3.1e-38 161.8 113 71.7
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 5.4e-38 161.0 112 69.6
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 7.0e-38 160.6 111 73.0
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 7.0e-38 160.6 109 67.9
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 7.0e-38 160.6 109 74.3
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 9.1e-38 160.2 113 72.6
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 9.1e-38 160.2 112 70.5
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.2e-37 159.8 111 73.9
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.6e-37 159.5 112 70.5
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.6e-37 159.5 112 70.5
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.0e-37 159.1 108 69.4
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.0e-37 159.1 122 68.0
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 2.7e-37 158.7 110 70.9
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.5e-37 158.3 111 71.2
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 3.5e-37 158.3 109 71.6
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 5.9e-37 157.5 110 68.2
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 5.9e-37 157.5 110 68.2
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 5.9e-37 157.5 112 70.5
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 7.7e-37 157.1 112 70.5
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 7.7e-37 157.1 112 69.6
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 7.7e-37 157.1 115 69.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 7.7e-37 157.1 107 70.1
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.3e-36 156.4 95 77.9
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.3e-36 156.4 102 72.5
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.3e-36 156.4 110 70.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.3e-36 156.4 95 77.9
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 1.7e-36 156.0 112 69.6
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.7e-36 156.0 110 70.0
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.7e-36 156.0 112 67.9
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 2.2e-36 155.6 110 70.0
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 2.2e-36 155.6 110 70.0
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.2e-36 155.6 112 70.5
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.2e-36 155.6 112 70.5
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.2e-36 155.6 112 70.5
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 3.8e-36 154.8 113 69.9
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.8e-36 154.8 93 78.5
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 6.5e-36 154.1 108 74.1
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 8.5e-36 153.7 112 68.8
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 8.5e-36 153.7 112 68.8
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.5e-35 152.9 112 68.8
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 1.9e-35 152.5 110 69.1
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 2.5e-35 152.1 112 69.6
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 3.2e-35 151.8 90 78.9
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 4.2e-35 151.4 87 79.3
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 4.2e-35 151.4 113 69.0
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 5.5e-35 151.0 109 67.0
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.2e-34 149.8 90 77.8
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.2e-34 149.8 95 73.7
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.6e-34 149.4 97 72.2
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.1e-34 149.1 93 73.1
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 3.6e-34 148.3 94 74.5
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 3.6e-34 148.3 110 65.5
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 3.6e-34 148.3 110 65.5
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 4.7e-34 147.9 121 63.6
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 4.7e-34 147.9 94 71.3
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 6.1e-34 147.5 100 67.0
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.4e-33 146.4 96 68.8
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.3e-33 145.6 76 86.8
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 3.0e-33 145.2 109 63.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 4.0e-33 144.8 110 64.5
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.5e-32 142.9 87 77.0
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 3.4e-32 141.7 100 68.0
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 3.4e-32 141.7 113 63.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 9.8e-32 140.2 92 68.5
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.3e-31 139.8 93 69.9
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.3e-31 139.8 73 87.7
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.1e-30 136.7 76 81.6
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 1.1e-30 136.7 90 71.1
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.1e-30 136.7 113 59.3
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.0e-30 134.0 94 73.4
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 7.0e-30 134.0 76 80.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.9e-29 131.0 90 67.8
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.0e-28 130.2 77 80.5
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.3e-28 129.8 83 72.3
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.3e-28 129.8 88 68.2
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 2.3e-28 129.0 111 57.7
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.9e-27 125.9 88 73.9
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 3.3e-27 125.2 99 60.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 4.3e-27 124.8 77 74.0
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 9.5e-27 123.6 86 72.1
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.0e-20 103.6 95 54.7
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 3.9e-20 101.7 106 43.4
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 9.5e-19 97.1 101 45.5
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.1e-17 93.6 77 57.1
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 4.0e-17 91.7 81 53.1
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 5.8e-16 87.8 55 74.5
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.2e-13 80.1 110 39.1
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 2.3e-09 65.9 89 40.4


User provided reference genes

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