Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 4.0e-232 807.7 417 100.0
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 4.5e-114 415.6 415 59.8
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 4.3e-109 399.1 408 55.9
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 1.7e-60 237.7 404 42.1
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 2.8e-60 236.9 411 39.7
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 1.6e-58 231.1 406 39.9
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 2.5e-56 223.8 399 41.4
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 3.2e-56 223.4 404 40.1
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 1.5e-53 214.5 402 40.0
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 1.5e-53 214.5 414 39.1
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 2.1e-47 194.1 407 37.1
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 1.8e-46 191.0 411 36.0
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 6.8e-46 189.1 405 37.8
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 7.5e-45 185.7 403 37.2
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 2.8e-44 183.7 409 36.4
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 3.1e-43 180.3 418 34.0
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 3.1e-43 180.3 423 34.8
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 5.6e-40 169.5 404 32.9
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 1.8e-38 164.5 407 32.7
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 9.2e-35 152.1 415 31.6
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 3.9e-33 146.7 289 41.2
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 5.0e-33 146.4 412 31.3
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 2.3e-30 137.5 413 32.7
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 8.9e-30 135.6 402 32.8
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 3.4e-29 133.7 400 32.8
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 3.4e-29 133.7 400 32.8
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 3.9e-25 120.2 454 30.4
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 8.6e-25 119.0 109 56.9
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 2.0e-21 107.8 420 27.6
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 5.4e-11 73.2 119 37.0
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 1.6e-10 71.6 108 38.0
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 2.1e-10 71.2 116 39.7
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 9.6e-08 62.4 417 24.0
Atru.chr1.2205 Acer truncatum HOM05D009025 ORTHO05D011227 1.6e-07 61.6 127 33.1
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 2.8e-07 60.8 167 26.3
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 1.1e-06 58.9 141 34.0


User provided reference genes

Program Settings