Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G080300 Carya illinoinensis HOM05D003857 ORTHO05D004454 3.9e-41 171.0 85 100.0
Haze_07004 Corylus avellana HOM05D003857 ORTHO05D004454 2.8e-15 85.1 98 57.1
TPR.G10580 Trifolium pratense HOM05D003857 ORTHO05D004454 1.8e-14 82.4 91 52.7
Lj4g0009185 Lotus japonicus HOM05D003857 ORTHO05D004454 1.2e-13 79.7 96 51.0
Thecc.06G238500 Theobroma cacao HOM05D003857 ORTHO05D004454 3.4e-13 78.2 97 51.5
Glyma.09G013000 Glycine max HOM05D003857 ORTHO05D004454 4.5e-13 77.8 91 53.8
Glyma.15G117900 Glycine max HOM05D003857 ORTHO05D004454 4.5e-13 77.8 91 53.8
Phvul.006G140400 Phaseolus vulgaris HOM05D003857 ORTHO05D004454 7.7e-13 77.0 94 52.1
Glyma.07G267300 Glycine max HOM05D003857 ORTHO05D004454 1.7e-12 75.9 98 50.0
Phvul.003G085900 Phaseolus vulgaris HOM05D003857 ORTHO05D004454 5.0e-12 74.3 98 46.9
Duzib192G0644 Durio zibethinus HOM05D003857 ORTHO05D004454 6.5e-12 73.9 98 46.9
MD00G1056900 Malus domestica HOM05D003857 ORTHO05D004454 4.2e-11 71.2 90 48.9
Lalb_Chr15g0088131 Lupinus albus HOM05D003857 ORTHO05D004454 9.4e-11 70.1 86 48.8
Prupe.4G005500 Prunus persica HOM05D003857 ORTHO05D004454 4.6e-10 67.8 89 47.2
Manes.08G070300 Manihot esculenta HOM05D003857 ORTHO05D004454 1.0e-09 66.6 101 48.5
Glyma.17G006700 Glycine max HOM05D003857 ORTHO05D004454 1.8e-09 65.9 95 43.2
Gohir.D06G162600 Gossypium hirsutum HOM05D003857 ORTHO05D004454 1.8e-09 65.9 98 43.9
Gorai.010G189800 Gossypium raimondii HOM05D003857 ORTHO05D004454 1.8e-09 65.9 98 43.9
CiPaw.09G107600 Carya illinoinensis HOM05D003857 ORTHO05D004454 2.3e-09 65.5 89 49.4
Potri.016G007101 Populus trichocarpa HOM05D003857 ORTHO05D004454 5.1e-09 64.3 91 46.2
RcHm_v2.0_Chr5g0000661 Rosa chinensis HOM05D003857 ORTHO05D004454 5.1e-09 64.3 86 47.7
Potri.006G017900 Populus trichocarpa HOM05D003857 ORTHO05D004454 6.7e-09 63.9 98 43.9
arahy.Tifrunner.gnm1.ann1.J6PND3 Arachis hypogaea HOM05D003857 ORTHO05D004454 8.8e-09 63.5 107 40.2
arahy.Tifrunner.gnm1.ann1.A9XG53 Arachis hypogaea HOM05D003857 ORTHO05D004454 1.1e-08 63.2 92 45.7
Ciclev10017306m.g Citrus clementina HOM05D003857 ORTHO05D004454 3.3e-08 61.6 84 47.6
Sabra16G0011900 Salix brachista HOM05D003857 ORTHO05D004454 4.3e-08 61.2 86 44.2
Cpa.g.c35467.2 Carica papaya HOM05D003857 ORTHO05D004454 5.7e-08 60.8 98 41.8
Gohir.A06G156300 Gossypium hirsutum HOM05D003857 ORTHO05D004454 5.7e-08 60.8 98 43.9
Atru.chr1.2307 Acer truncatum HOM05D003857 ORTHO05D004454 7.4e-08 60.5 91 40.7
Sabra06G0013000 Salix brachista HOM05D003857 ORTHO05D004454 1.3e-07 59.7 98 39.8
SalBow8G3453 Salvia bowleyana HOM05D003857 ORTHO05D004454 2.8e-07 58.5 91 39.6
Rhsim13G0142200 Rhododendron simsii HOM05D003857 ORTHO05D004454 3.7e-07 58.2 86 40.7
TAR629G0922 Trochodendron aralioides HOM05D003857 ORTHO05D004454 1.8e-06 55.8 86 40.7
FvH4_3g00490 Fragaria vesca HOM05D003857 ORTHO05D004454 3.1e-06 55.1 85 44.7
FAN25G3265 Fragaria x ananassa HOM05D003857 ORTHO05D004454 4.1e-06 54.7 87 43.7
Nn1g07497 Nelumbo nucifera HOM05D003857 ORTHO05D004454 4.1e-06 54.7 86 38.4
TWI38G0111 Tripterygium wilfordii HOM05D003857 ORTHO05D004454 4.1e-06 54.7 73 46.6
GSVIVG01003487001 Vitis vinifera HOM05D003857 ORTHO05D004454 4.1e-06 54.7 86 43.0
Manes.15G060900 Manihot esculenta HOM05D003857 ORTHO05D004454 5.3e-06 54.3 84 39.3
CiPaw.12G137500 Carya illinoinensis HOM05D003857 ORTHO05D004454 9.1e-06 53.5 92 34.8
QL08p004432 Quercus lobata HOM05D003857 ORTHO05D004454 9.1e-06 53.5 98 36.7
QL08p004552 Quercus lobata HOM05D003857 ORTHO05D004454 9.1e-06 53.5 98 36.7


User provided reference genes

Program Settings