Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G077400 Carya illinoinensis HOM05D010366 ORTHO05D010665 4.5e-90 334.7 187 100.0
Cfa000112 Carpinus fangiana HOM05D065501 ORTHO05D010665 3.0e-17 92.8 202 37.6
Aqoxy1G02849 Aquilegia oxysepala HOM05D010366 ORTHO05D010665 1.5e-16 90.5 116 44.8
QL09p006329 Quercus lobata HOM05D010366 ORTHO05D010665 5.6e-16 88.6 103 54.4
Thecc.06G232400 Theobroma cacao HOM05D010366 ORTHO05D010665 8.9e-14 81.3 118 44.1
COL.COLO4_31874 Corchorus olitorius HOM05D010366 ORTHO05D010665 5.8e-13 78.6 117 41.0
Manes.10G050200 Manihot esculenta HOM05D010366 ORTHO05D010665 9.9e-13 77.8 110 48.2
Gohir.D06G215850 Gossypium hirsutum HOM05D010366 ORTHO05D010665 1.3e-12 77.4 119 46.2
Gorai.010G250400 Gossypium raimondii HOM05D010366 ORTHO05D010665 1.3e-12 77.4 119 46.2
Gohir.A06G205801 Gossypium hirsutum HOM05D010366 ORTHO05D010665 1.7e-12 77.0 113 46.0
TAR624G0666 Trochodendron aralioides HOM05D010366 ORTHO05D010665 2.9e-12 76.3 111 48.6
Atru.chr1.2465 Acer truncatum HOM05D010366 ORTHO05D010665 1.1e-11 74.3 131 35.1
FvH4_3g01051 Fragaria vesca HOM05D010366 ORTHO05D010665 1.9e-11 73.6 128 41.4
Thecc.07G027800 Theobroma cacao HOM05D014067 ORTHO05D010665 3.2e-11 72.8 115 37.4
FAN21G4035 Fragaria x ananassa HOM05D010366 ORTHO05D010665 4.1e-11 72.4 207 32.9
Gohir.A06G153000 Gossypium hirsutum HOM05D010366 ORTHO05D010665 2.1e-10 70.1 110 39.1
Prupe.4G011600 Prunus persica HOM05D010366 ORTHO05D010665 2.7e-10 69.7 111 39.6
Potri.016G015300 Populus trichocarpa HOM05D010366 ORTHO05D010665 4.6e-10 68.9 110 43.6
Actinidia35372 Actinidia chinensis HOM05D014067 ORTHO05D010665 7.8e-10 68.2 100 44.0
Gohir.A01G084850 Gossypium hirsutum HOM05D014067 ORTHO05D010665 7.8e-10 68.2 125 41.6
Potri.006G008900 Populus trichocarpa HOM05D010366 ORTHO05D010665 7.8e-10 68.2 110 40.0
TWI38G1505 Tripterygium wilfordii HOM05D000701 ORTHO05D000531 7.8e-10 68.2 107 43.0
Haze_06912 Corylus avellana HOM05D065501 ORTHO05D010665 2.3e-09 66.6 172 33.1
Dinv07396 Davidia involucrata HOM05D010366 ORTHO05D010665 2.3e-09 66.6 115 40.9
Gorai.010G186100 Gossypium raimondii HOM05D010366 ORTHO05D010665 2.3e-09 66.6 111 40.5
Gohir.D06G159400 Gossypium hirsutum HOM05D010366 ORTHO05D010665 5.1e-09 65.5 111 40.5
FAN25G1967 Fragaria x ananassa HOM05D010366 ORTHO05D010665 1.5e-08 63.9 128 39.8
Gohir.D01G071250 Gossypium hirsutum HOM05D014067 ORTHO05D010665 2.5e-08 63.2 127 39.4
TAR627G0180 Trochodendron aralioides HOM05D005375 ORTHO05D006598 1.6e-07 60.5 115 38.3
Cfa020275 Carpinus fangiana HOM05D014737 ORTHO05D010665 4.7e-07 58.9 126 36.5
DCAR_030874 Daucus carota HOM05D023850 ORTHO05D010665 4.7e-07 58.9 114 36.0
Gorai.002G094000 Gossypium raimondii HOM05D014067 ORTHO05D010665 6.2e-07 58.5 108 40.7
Oeu005516.1 Olea europaea HOM05D014067 ORTHO05D010665 8.1e-07 58.2 114 36.0
MSTRG.18893 Avicennia marina HOM05D023850 ORTHO05D010665 1.4e-06 57.4 118 39.0
Aqoxy1G04122 Aquilegia oxysepala HOM05D010366 ORTHO05D010665 1.8e-06 57.0 102 33.3
Haze_09748 Corylus avellana HOM05D014737 ORTHO05D010665 2.4e-06 56.6 110 38.2
Manes.03G136520 Manihot esculenta HOM05D014737 ORTHO05D010665 3.1e-06 56.2 106 41.5
COL.COLO4_09739 Corchorus olitorius HOM05D014067 ORTHO05D010665 6.8e-06 55.1 118 34.7


User provided reference genes

Program Settings