Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 3.3e-62 241.5 121 100.0
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 5.2e-55 217.6 121 89.3
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 2.0e-54 215.7 120 88.3
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 9.7e-54 213.4 121 85.1
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.3e-53 213.0 121 86.8
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.3e-53 213.0 121 85.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.7e-53 212.6 121 86.0
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 2.2e-53 212.2 121 86.0
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 4.8e-53 211.1 121 86.0
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 8.2e-53 210.3 121 85.1
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 8.2e-53 210.3 121 85.1
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.1e-52 209.9 121 85.1
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 1.4e-52 209.5 121 86.0
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.8e-52 209.1 121 82.6
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.8e-52 209.1 121 85.1
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 2.4e-52 208.8 121 84.3
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 2.4e-52 208.8 121 85.1
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 5.3e-52 207.6 119 84.9
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 9.1e-52 206.8 121 82.6
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.2e-51 206.5 121 83.5
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 1.2e-51 206.5 121 82.6
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 1.6e-51 206.1 121 81.0
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.6e-51 206.1 121 81.0
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 2.0e-51 205.7 121 83.5
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 2.7e-51 205.3 121 82.6
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 3.5e-51 204.9 121 82.6
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 4.5e-51 204.5 121 81.0
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 5.9e-51 204.1 121 82.6
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 7.7e-51 203.8 121 82.6
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 7.7e-51 203.8 121 82.6
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 7.7e-51 203.8 121 82.6
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 7.7e-51 203.8 121 82.6
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 7.7e-51 203.8 121 81.8
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 7.7e-51 203.8 121 82.6
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 1.0e-50 203.4 121 82.6
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 1.0e-50 203.4 121 83.5
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.0e-50 203.4 119 83.2
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.0e-50 203.4 121 80.2
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.3e-50 203.0 119 83.2
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.3e-50 203.0 121 82.6
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 1.3e-50 203.0 121 82.6
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.7e-50 202.6 147 74.1
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.7e-50 202.6 119 83.2
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 1.7e-50 202.6 119 83.2
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.2e-50 202.2 119 83.2
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 2.2e-50 202.2 121 81.8
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 2.2e-50 202.2 121 80.2
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 2.2e-50 202.2 119 83.2
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 2.9e-50 201.8 121 81.8
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 5.0e-50 201.1 121 80.2
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 5.0e-50 201.1 121 80.2
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 8.5e-50 200.3 121 82.6
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 8.5e-50 200.3 121 81.0
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.1e-49 199.9 121 81.8
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 2.5e-49 198.7 121 77.7
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 3.2e-49 198.4 121 81.0
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 3.2e-49 198.4 125 80.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 4.2e-49 198.0 121 76.9
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 4.2e-49 198.0 121 78.5
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 4.2e-49 198.0 121 78.5
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 4.2e-49 198.0 121 78.5
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 4.2e-49 198.0 121 78.5
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 4.2e-49 198.0 121 78.5
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 5.5e-49 197.6 121 79.3
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 5.5e-49 197.6 121 78.5
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 2.1e-48 195.7 121 79.3
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 2.1e-48 195.7 121 76.9
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-48 195.7 136 74.3
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-48 195.7 136 74.3
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.1e-48 195.7 136 74.3
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 2.1e-48 195.7 119 78.2
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 2.7e-48 195.3 121 77.7
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.6e-48 194.9 121 76.9
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 4.7e-48 194.5 111 83.8
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 6.1e-48 194.1 121 77.7
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 8.0e-48 193.7 121 77.7
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.0e-47 193.4 121 78.5
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 1.4e-47 193.0 117 79.5
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 2.3e-47 192.2 120 75.8
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 2.6e-46 188.7 114 81.6
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 3.4e-46 188.3 111 81.1
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 4.4e-46 188.0 121 74.4
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 1.7e-45 186.0 114 81.6
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.7e-45 186.0 112 81.2
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 8.3e-45 183.7 121 74.4
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 1.1e-44 183.3 121 77.7
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.4e-44 183.0 114 79.8
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.8e-44 182.6 112 80.4
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 3.1e-44 181.8 121 73.6
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 5.4e-44 181.0 114 76.3
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 1.2e-43 179.9 115 69.6
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.6e-43 179.5 115 77.4
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 3.5e-43 178.3 112 78.6
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.3e-42 176.4 103 82.5
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.2e-42 175.6 119 71.4
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.1e-41 173.3 117 72.6
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 1.9e-41 172.6 111 76.6
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 2.1e-40 169.1 114 66.7
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 8.8e-39 163.7 107 74.8
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 8.8e-39 163.7 107 74.8
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 5.4e-36 154.5 121 66.1
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.0e-31 140.2 103 66.0
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.3e-31 139.0 75 88.0
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 1.3e-29 133.3 83 78.3
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 4.1e-20 101.7 62 71.0
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.0e-14 82.8 97 42.3
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 2.1e-08 62.8 35 88.6
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 9.9e-06 53.9 114 34.2


User provided reference genes

Program Settings