Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.1e-24 116.3 81 100.0
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 2.2e-17 92.0 81 59.3
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 1.2e-15 86.3 79 54.4
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 1.9e-13 79.0 86 51.2
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 1.2e-12 76.3 81 49.4
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 2.1e-12 75.5 80 47.5
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.7e-12 74.3 79 46.8
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 4.7e-12 74.3 76 47.4
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 6.2e-12 73.9 79 49.4
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 6.2e-12 73.9 81 48.1
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 6.2e-12 73.9 79 46.8
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 1.4e-11 72.8 81 49.4
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 1.4e-11 72.8 81 48.1
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 2.3e-11 72.0 81 46.9
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 3.1e-11 71.6 80 45.0
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 3.1e-11 71.6 80 43.8
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 4.0e-11 71.2 76 47.4
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 8.9e-11 70.1 81 67.9
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.2e-10 69.7 76 46.1
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.2e-10 69.7 80 43.8
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 1.2e-10 69.7 76 68.4
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 1.5e-10 69.3 80 46.2
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 2.0e-10 68.9 81 66.7
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.0e-10 68.9 81 46.9
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.6e-10 68.6 81 46.9
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 3.4e-10 68.2 80 43.8
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 3.4e-10 68.2 79 46.8
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 9.9e-10 66.6 81 50.6
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 9.9e-10 66.6 80 42.5
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 2.9e-09 65.1 79 67.1
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 4.9e-09 64.3 71 54.9
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 6.4e-09 63.9 79 41.8
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 8.3e-09 63.5 81 45.7
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 8.3e-09 63.5 81 46.9
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 1.1e-08 63.2 81 42.0
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 1.1e-08 63.2 80 43.8
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 1.4e-08 62.8 81 43.2
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.4e-08 62.8 79 44.3
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.4e-08 62.8 79 44.3
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 2.4e-08 62.0 76 40.8
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 2.4e-08 62.0 81 43.2
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 2.4e-08 62.0 76 46.1
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 3.2e-08 61.6 77 42.9
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 4.1e-08 61.2 84 65.5
Ciclev10017336m.g Citrus clementina HOM05D009550 ORTHO05D006691 4.1e-08 61.2 85 65.9
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 7.1e-08 60.5 76 46.1
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 7.1e-08 60.5 81 42.0
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 9.2e-08 60.1 79 40.5
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 9.2e-08 60.1 80 42.5
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 1.2e-07 59.7 76 43.4
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 1.6e-07 59.3 81 44.4
TAR626G0921 Trochodendron aralioides HOM05D007037 ORTHO05D006691 2.1e-07 58.9 53 62.3
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.7e-07 58.5 80 41.2
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 4.6e-07 57.8 80 43.8
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 4.6e-07 57.8 80 42.5
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 4.6e-07 57.8 80 43.8
vmacro23211 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.0e-06 56.6 78 46.2
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 1.3e-06 56.2 80 41.2
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 1.7e-06 55.8 80 41.2
Rhsim02G0106600 Rhododendron simsii HOM05D007037 ORTHO05D006691 1.7e-06 55.8 90 55.6
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 1.7e-06 55.8 81 39.5
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.7e-06 55.8 88 56.8
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 2.3e-06 55.5 48 56.2
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 5.1e-06 54.3 78 43.6
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 6.6e-06 53.9 78 42.3
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 6.6e-06 53.9 80 37.5
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 8.6e-06 53.5 77 40.3
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 8.6e-06 53.5 79 38.0


User provided reference genes

Program Settings