Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.5e-164 582.8 289 100.0
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 6.0e-142 507.7 287 88.5
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 7.3e-140 500.7 287 86.8
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 7.3e-140 500.7 287 86.8
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 5.2e-130 468.0 287 79.4
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 7.1e-127 457.6 288 78.8
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.6e-126 456.4 287 77.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 3.5e-126 455.3 287 77.0
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.5e-124 449.9 287 76.0
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.5e-124 449.9 287 75.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 9.6e-124 447.2 287 76.7
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.1e-123 446.0 287 75.6
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 3.6e-123 445.3 287 76.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 3.6e-123 445.3 287 77.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 6.2e-123 444.5 287 77.0
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 3.1e-122 442.2 287 73.9
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 5.3e-122 441.4 287 74.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.2e-121 440.3 290 75.2
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.2e-121 440.3 287 75.3
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.6e-121 439.1 287 73.9
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 3.4e-121 438.7 287 74.6
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 5.8e-121 438.0 287 74.6
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 8.4e-120 434.1 274 78.5
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 8.4e-120 434.1 288 73.6
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-119 433.3 289 74.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.4e-119 433.3 290 73.4
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.4e-119 433.3 287 74.2
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.9e-119 433.0 287 73.9
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 2.4e-119 432.6 293 73.7
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.4e-119 432.6 290 73.4
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 2.4e-119 432.6 289 73.0
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 3.2e-119 432.2 287 74.2
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 4.2e-119 431.8 289 73.0
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 7.1e-119 431.0 287 72.8
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 7.1e-119 431.0 290 73.1
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.6e-118 429.9 287 74.2
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 2.1e-118 429.5 287 72.5
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.1e-118 429.5 287 73.2
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.5e-118 428.7 289 73.4
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 4.6e-118 428.3 287 73.2
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 6.0e-118 427.9 289 73.4
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 7.8e-118 427.6 288 73.3
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.0e-117 427.2 291 72.9
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.0e-117 427.2 291 72.9
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.0e-117 427.2 281 75.1
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.0e-117 427.2 290 72.1
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.3e-117 426.8 287 73.5
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.3e-117 426.8 290 72.4
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.3e-117 426.8 287 71.4
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.7e-117 426.4 289 71.6
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.3e-117 426.0 287 72.8
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 2.3e-117 426.0 287 72.8
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.1e-116 423.7 288 74.0
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.5e-116 423.3 290 72.1
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.9e-116 422.9 288 72.6
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.5e-116 422.5 287 72.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 2.5e-116 422.5 287 71.1
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.5e-116 422.5 287 72.1
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 3.3e-116 422.2 287 73.2
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 4.3e-116 421.8 290 71.4
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.1e-115 419.5 289 70.6
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 3.6e-115 418.7 287 72.8
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 6.2e-115 417.9 287 71.4
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 6.2e-115 417.9 287 71.4
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 6.2e-115 417.9 287 71.4
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 6.2e-115 417.9 289 72.3
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.1e-114 417.2 282 73.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 2.4e-114 416.0 287 71.4
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.2e-113 413.7 290 70.0
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.0e-113 412.9 287 71.1
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 5.8e-113 411.4 287 70.7
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 5.8e-113 411.4 288 71.5
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 1.7e-112 409.8 277 73.6
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.7e-112 409.8 290 71.4
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.9e-112 409.1 289 69.6
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 6.4e-112 407.9 288 71.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 1.4e-111 406.8 264 77.3
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 9.3e-111 404.1 287 70.4
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.2e-110 403.7 329 62.3
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.2e-110 403.7 287 69.3
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 2.1e-110 402.9 289 70.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.7e-110 402.5 287 69.0
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 4.6e-110 401.7 265 74.3
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 4.6e-110 401.7 288 70.5
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.0e-109 400.6 287 68.6
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.8e-109 399.8 287 67.9
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.9e-108 396.4 288 67.7
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 9.6e-108 394.0 293 68.6
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 8.1e-107 391.0 311 66.2
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 8.1e-107 391.0 288 67.0
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.8e-106 389.8 288 69.1
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.4e-106 389.4 288 68.4
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 4.0e-106 388.7 287 69.0
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 5.3e-106 388.3 288 68.1
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.2e-105 387.1 262 72.5
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 5.8e-105 384.8 287 65.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.3e-104 383.6 299 65.2
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.3e-104 383.6 265 72.5
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.8e-104 382.1 286 63.3
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.9e-103 379.8 286 66.1
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 4.2e-103 378.6 286 63.6
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.1e-102 376.3 238 76.9
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 2.3e-101 372.9 265 69.1
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.4e-98 363.6 286 62.9
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 6.5e-96 354.8 268 66.0
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 2.6e-89 332.8 242 68.2
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.5e-84 317.0 278 60.1
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.2e-83 311.2 284 57.4
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 8.2e-83 311.2 287 57.5
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.4e-82 310.5 237 65.8
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.7e-78 296.2 287 53.0
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 9.7e-68 261.2 191 67.0
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.2e-67 260.0 184 69.6
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 9.1e-66 254.6 285 47.4
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 8.8e-61 238.0 237 51.9
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.1e-58 229.6 179 68.2
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 9.1e-58 228.0 267 50.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 8.0e-54 214.9 250 50.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 4.0e-53 212.6 377 35.5
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.1e-50 202.6 270 44.1
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 9.1e-50 201.4 244 49.2
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.0e-49 200.3 214 54.7
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-47 192.2 184 59.2
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 1.2e-46 191.0 285 40.4
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.0e-46 188.3 184 58.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 3.2e-42 176.4 248 44.4
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 4.0e-21 106.3 204 38.7
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 1.8e-13 80.9 49 77.6
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 3.5e-09 66.6 157 31.2
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 6.0e-09 65.9 83 44.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 1.3e-08 64.7 35 82.9
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.3e-08 63.9 37 70.3


User provided reference genes

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