Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.1e-92 343.2 167 100.0
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 4.5e-57 224.9 147 72.1
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.3e-56 223.4 159 62.3
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.7e-56 223.0 147 71.4
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.8e-56 221.9 159 61.0
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.8e-56 221.9 159 61.6
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 8.4e-56 220.7 161 63.4
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.4e-55 219.9 151 63.6
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 2.4e-55 219.2 147 66.0
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 2.4e-55 219.2 169 62.1
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 7.1e-55 217.6 146 65.8
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 9.3e-55 217.2 167 59.3
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.2e-54 216.9 154 63.0
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 2.7e-54 215.7 159 62.3
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 4.6e-54 214.9 146 65.1
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 6.0e-54 214.5 140 68.6
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.0e-53 213.8 151 64.9
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 2.3e-53 212.6 146 66.4
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 5.1e-53 211.5 151 66.2
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.9e-52 209.5 149 66.4
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 2.5e-52 209.1 165 58.2
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 9.6e-52 207.2 161 61.5
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 9.6e-52 207.2 148 62.8
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.3e-51 206.8 171 56.7
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.6e-51 206.5 141 65.2
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 4.8e-51 204.9 151 62.9
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 8.2e-51 204.1 151 63.6
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.4e-50 203.4 156 57.7
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 5.3e-50 201.4 156 57.1
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 4.5e-49 198.4 141 64.5
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 5.8e-49 198.0 159 58.5
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 7.6e-49 197.6 141 61.7
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 7.6e-49 197.6 137 65.7
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.3e-48 196.8 167 56.9
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 3.8e-48 195.3 143 62.9
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 4.9e-48 194.9 123 66.7
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 6.5e-48 194.5 156 56.4
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.4e-47 193.4 137 66.4
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 2.5e-47 192.6 158 57.0
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.2e-47 192.2 165 61.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 9.3e-47 190.7 142 59.9
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.6e-46 189.9 158 56.3
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 4.6e-46 188.3 162 53.7
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 7.9e-46 187.6 157 54.1
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 2.3e-45 186.0 150 58.0
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 3.9e-45 185.3 123 65.9
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.7e-44 181.4 124 66.9
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 9.7e-44 180.6 144 54.9
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 9.7e-44 180.6 144 54.9
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 2.2e-43 179.5 150 55.3
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 2.2e-43 179.5 137 60.6
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 2.8e-43 179.1 147 54.4
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 2.8e-43 179.1 149 54.4
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.8e-43 179.1 144 54.2
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 2.8e-43 179.1 144 54.2
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 2.8e-43 179.1 150 55.3
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 3.7e-43 178.7 159 54.7
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 3.7e-43 178.7 134 61.9
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 3.7e-43 178.7 140 57.9
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 4.8e-43 178.3 144 54.2
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 4.8e-43 178.3 137 62.0
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 8.2e-43 177.6 140 57.9
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.1e-42 177.2 150 53.3
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.8e-42 176.4 145 53.8
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 2.4e-42 176.0 144 53.5
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.4e-42 176.0 149 51.7
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 3.1e-42 175.6 151 54.3
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 3.1e-42 175.6 144 56.9
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 4.1e-42 175.3 142 57.7
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 6.9e-42 174.5 137 59.1
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 9.0e-42 174.1 144 52.8
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 9.0e-42 174.1 141 56.7
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.2e-41 173.7 128 62.5
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.5e-41 173.3 140 57.1
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.0e-41 172.9 161 52.8
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.4e-41 172.2 137 59.1
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 1.1e-39 167.2 163 50.9
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.1e-39 167.2 155 49.7
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.9e-39 166.4 157 51.0
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.2e-38 163.7 142 52.8
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 2.1e-38 162.9 140 52.9
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.1e-38 162.9 137 54.7
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.1e-38 162.9 137 54.7
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 2.7e-38 162.5 140 52.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 4.6e-38 161.8 142 50.7
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 4.6e-38 161.8 160 46.9
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 4.6e-38 161.8 143 50.3
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 7.9e-38 161.0 142 50.7
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 8.8e-37 157.5 125 55.2
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.3e-35 153.7 138 51.4
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 2.2e-35 152.9 110 63.6
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.2e-35 152.9 138 52.2
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 2.8e-35 152.5 140 50.7
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 1.1e-34 150.6 133 52.6
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.8e-34 149.8 138 50.7
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 3.6e-30 135.6 116 55.2
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 5.1e-29 131.7 93 67.7
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.0e-28 129.8 150 44.0
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 7.4e-28 127.9 109 53.2
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 2.2e-27 126.3 128 44.5
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 4.8e-27 125.2 140 46.4
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 6.3e-27 124.8 158 40.5
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 9.1e-26 120.9 161 40.4
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 4.5e-25 118.6 203 31.5
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 2.2e-24 116.3 141 44.0
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 2.9e-24 115.9 140 42.1
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 8.0e-22 107.8 79 59.5
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 7.4e-20 101.3 68 64.7
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.5e-17 92.0 60 61.7
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 7.7e-17 91.3 140 36.4
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 7.2e-15 84.7 102 38.2
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 1.6e-14 83.6 131 34.4
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 8.8e-13 77.8 59 59.3
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 2.8e-11 72.8 79 46.8
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 1.2e-09 67.4 107 35.5
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.7e-08 63.5 53 56.6
Cfa003473 Carpinus fangiana HOM05D006750 ORTHO05D008426 3.8e-08 62.4 85 45.9
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 1.5e-07 60.5 62 45.2
Cfa005130 Carpinus fangiana HOM05D000013 ORTHO05D000011 3.2e-07 59.3 85 43.5
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 6.1e-06 55.1 42 47.6


User provided reference genes

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