Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G063900 Carya illinoinensis HOM05D004945 ORTHO05D005536 1.2e-48 196.1 93 100.0
CiPaw.09G075900 Carya illinoinensis HOM05D004945 ORTHO05D005536 8.3e-45 183.3 89 96.6
Haze_06091 Corylus avellana HOM05D004945 ORTHO05D005536 4.6e-43 177.6 93 88.2
Prupe.1G075600 Prunus persica HOM05D004945 ORTHO05D005536 1.2e-40 169.5 89 86.5
PGR142G1282 Punica granatum HOM05D004945 ORTHO05D005536 3.6e-40 167.9 93 82.8
MD07G1027600 Malus domestica HOM05D004945 ORTHO05D005536 6.2e-40 167.2 89 84.3
Ciclev10010043m.g Citrus clementina HOM05D004945 ORTHO05D005536 1.4e-39 166.0 89 82.0
Cpa.g.sc95.12 Carica papaya HOM05D004945 ORTHO05D005536 2.3e-39 165.2 93 82.8
TWI63G0641 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 2.3e-39 165.2 93 83.9
Thecc.09G185900 Theobroma cacao HOM05D004945 ORTHO05D005536 4.0e-39 164.5 89 82.0
TAR625G1304 Trochodendron aralioides HOM05D004945 ORTHO05D005536 5.2e-39 164.1 93 79.6
MD13G1241900 Malus domestica HOM05D004945 ORTHO05D005536 6.8e-39 163.7 89 83.1
Actinidia38805 Actinidia chinensis HOM05D004945 ORTHO05D005536 1.2e-38 162.9 93 79.6
QL11p013920 Quercus lobata HOM05D004945 ORTHO05D005536 1.5e-38 162.5 92 82.6
QL11p014429 Quercus lobata HOM05D004945 ORTHO05D005536 2.0e-38 162.2 92 81.5
Manes.06G020000 Manihot esculenta HOM05D004945 ORTHO05D005536 2.6e-38 161.8 89 78.7
Potri.018G142500 Populus trichocarpa HOM05D004945 ORTHO05D005536 4.4e-38 161.0 93 80.6
SHI03058 Sapria himalayana HOM05D004945 ORTHO05D005536 4.4e-38 161.0 93 77.4
COL.COLO4_08559 Corchorus olitorius HOM05D004945 ORTHO05D005536 1.3e-37 159.5 93 78.5
Sabra18G0116400 Salix brachista HOM05D004945 ORTHO05D005536 1.3e-37 159.5 88 80.7
COL.COLO4_22793 Corchorus olitorius HOM05D004945 ORTHO05D005536 1.7e-37 159.1 93 78.5
Potri.006G075600 Populus trichocarpa HOM05D004945 ORTHO05D005536 1.7e-37 159.1 93 76.3
TWI34G0510 Tripterygium wilfordii HOM05D004945 ORTHO05D005536 1.7e-37 159.1 93 78.5
Rhsim08G0249700 Rhododendron simsii HOM05D004945 ORTHO05D005536 2.2e-37 158.7 94 78.7
TAR636G3350 Trochodendron aralioides HOM05D004945 ORTHO05D005536 3.7e-37 157.9 88 77.3
CANSAT11G0762 Cannabis sativa HOM05D004945 ORTHO05D005536 4.9e-37 157.5 89 79.8
Duzib150G0603 Durio zibethinus HOM05D004945 ORTHO05D005536 6.4e-37 157.1 89 77.5
MELO3C017430.2 Cucumis melo HOM05D004945 ORTHO05D005536 1.4e-36 156.0 93 79.6
Hma1.2p1_0517F.1_g170730 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 1.4e-36 156.0 93 79.6
CSS0028266 Camellia sinensis var. sinensis HOM05D004945 ORTHO05D005536 1.9e-36 155.6 93 75.3
ClCG06G013580 Citrullus lanatus HOM05D004945 ORTHO05D005536 2.4e-36 155.2 93 77.4
Gorai.004G025200 Gossypium raimondii HOM05D004945 ORTHO05D005536 2.4e-36 155.2 89 75.3
DCAR_007670 Daucus carota HOM05D004945 ORTHO05D005536 4.1e-36 154.5 89 78.7
Sed0015624 Sechium edule HOM05D004945 ORTHO05D005536 4.1e-36 154.5 93 79.6
Sed0005101 Sechium edule HOM05D004945 ORTHO05D005536 5.4e-36 154.1 93 79.6
Duzib150G1578 Durio zibethinus HOM05D004945 ORTHO05D005536 7.0e-36 153.7 89 76.4
RcHm_v2.0_Chr4g0399651 Rosa chinensis HOM05D004945 ORTHO05D005536 7.0e-36 153.7 90 78.9
Atru.chr7.757 Acer truncatum HOM05D004945 ORTHO05D005536 9.2e-36 153.3 87 78.2
Atru.chr7.779 Acer truncatum HOM05D004945 ORTHO05D005536 9.2e-36 153.3 87 78.2
Sc12g0011140 Simmondsia chinensis HOM05D004945 ORTHO05D005536 9.2e-36 153.3 93 78.5
Gohir.D08G028100 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.2e-35 152.9 89 74.2
FvH4_4g07310 Fragaria vesca HOM05D004945 ORTHO05D005536 1.6e-35 152.5 90 76.7
CsaV3_1G031860 Cucumis sativus L. HOM05D004945 ORTHO05D005536 3.5e-35 151.4 93 77.4
ATR0626G412 Amborella trichopoda HOM05D004945 ORTHO05D005536 7.8e-35 150.2 87 78.2
Aqoxy1G01195 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 1.0e-34 149.8 93 77.4
FAN07G0945 Fragaria x ananassa HOM05D004945 ORTHO05D005536 1.7e-34 149.1 90 75.6
Gohir.D13G212800 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.7e-34 149.1 89 70.8
Gorai.013G243200 Gossypium raimondii HOM05D004945 ORTHO05D005536 1.7e-34 149.1 89 70.8
Nitab4.5_0003757g0090 Nicotiana tabacum HOM05D004945 ORTHO05D005536 2.3e-34 148.7 83 80.7
Solyc06g063310.2 Solanum lycopersicum HOM05D004945 ORTHO05D005536 3.0e-34 148.3 93 75.3
Sopen06g022780 Solanum pennellii HOM05D004945 ORTHO05D005536 3.0e-34 148.3 93 75.3
Cc04_g00230 Coffea canephora HOM05D004945 ORTHO05D005536 3.9e-34 147.9 87 74.7
PGSC0003DMG400026503 Solanum tuberosum HOM05D004945 ORTHO05D005536 3.9e-34 147.9 93 74.2
CAN.G308.14 Capsicum annuum HOM05D004945 ORTHO05D005536 5.0e-34 147.5 93 76.3
Eucgr.C00118 Eucalyptus grandis HOM05D004945 ORTHO05D005536 5.0e-34 147.5 93 71.0
Glyma.15G165900 Glycine max HOM05D004945 ORTHO05D005536 5.0e-34 147.5 88 75.0
Gohir.A08G017500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.0e-34 147.5 89 71.9
Gohir.A13G208400 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.0e-34 147.5 89 69.7
Gohir.A13G208500 Gossypium hirsutum HOM05D004945 ORTHO05D005536 5.0e-34 147.5 89 68.5
Sc15g0001010 Simmondsia chinensis HOM05D004945 ORTHO05D005536 8.6e-34 146.7 93 74.2
QL11p013931 Quercus lobata HOM05D004945 ORTHO05D005536 1.1e-33 146.4 92 73.9
Gohir.D13G212900 Gossypium hirsutum HOM05D004945 ORTHO05D005536 1.5e-33 146.0 89 67.4
Glyma.09G059600 Glycine max HOM05D004945 ORTHO05D005536 4.3e-33 144.4 88 75.0
Phvul.007G156600 Phaseolus vulgaris HOM05D004945 ORTHO05D005536 5.6e-33 144.1 87 72.4
THA.LOC104803956 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.2e-32 142.9 93 74.2
THA.LOC104803979 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.2e-32 142.9 93 74.2
Ca_02105_v3 Cicer arietinum L. HOM05D004945 ORTHO05D005536 1.6e-32 142.5 87 74.7
Migut.D00890 Erythranthe guttata HOM05D004945 ORTHO05D005536 2.8e-32 141.7 87 69.0
THA.LOC104820006 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.6e-32 141.4 93 71.0
Hma1.2p1_1111F.1_g258380 Hydrangea macrophylla HOM05D004945 ORTHO05D005536 6.2e-32 140.6 93 72.0
QL11p014451 Quercus lobata HOM05D004945 ORTHO05D005536 6.2e-32 140.6 92 70.7
CDE04G2745 Ceratophyllum demersum HOM05D004945 ORTHO05D005536 8.1e-32 140.2 89 70.8
arahy.Tifrunner.gnm1.ann1.M8DR4H Arachis hypogaea HOM05D004945 ORTHO05D005536 1.4e-31 139.4 91 69.2
arahy.Tifrunner.gnm1.ann1.ZYC9F0 Arachis hypogaea HOM05D004945 ORTHO05D005536 1.4e-31 139.4 91 69.2
Migut.I01191 Erythranthe guttata HOM05D004945 ORTHO05D005536 4.0e-31 137.9 87 73.6
Lsat_1_v5_gn_1_39460 Lactuca sativa HOM05D004945 ORTHO05D005536 4.0e-31 137.9 93 66.7
Aqoxy7G02794 Aquilegia oxysepala HOM05D004945 ORTHO05D005536 6.8e-31 137.1 94 71.3
Lj6g0012502 Lotus japonicus HOM05D004945 ORTHO05D005536 1.2e-30 136.3 88 71.6
BcaB03g12628 Brassica carinata HOM05D004945 ORTHO05D005536 1.5e-30 136.0 93 67.7
TPR.G7575 Trifolium pratense HOM05D004945 ORTHO05D005536 2.0e-30 135.6 87 70.1
Sp7g27810 Schrenkiella parvula HOM05D004945 ORTHO05D005536 2.6e-30 135.2 93 67.7
Ah.13g075140 Amaranthus hybridus HOM05D004945 ORTHO05D005536 4.4e-30 134.4 89 68.5
unitig_32.g11008 Utricularia gibba HOM05D004945 ORTHO05D005536 5.8e-30 134.0 91 68.1
BcaC01g01207 Brassica carinata HOM05D004945 ORTHO05D005536 7.5e-30 133.7 93 66.7
A08p19460 Brassica napus HOM05D004945 ORTHO05D005536 7.5e-30 133.7 93 66.7
C03p88960 Brassica napus HOM05D004945 ORTHO05D005536 7.5e-30 133.7 93 66.7
BolC3t21206H Brassica oleracea HOM05D004945 ORTHO05D005536 7.5e-30 133.7 93 66.7
BraA08t33908Z Brassica rapa HOM05D004945 ORTHO05D005536 7.5e-30 133.7 93 66.7
Psat1g144160 Pisum sativum HOM05D004945 ORTHO05D005536 7.5e-30 133.7 87 67.8
unitig_748.g8030 Utricularia gibba HOM05D004945 ORTHO05D005536 7.5e-30 133.7 93 68.8
Carub.0007s1064 Capsella rubella HOM05D004945 ORTHO05D005536 9.8e-30 133.3 93 68.8
MD10G1108200 Malus domestica HOM05D004945 ORTHO05D005536 1.7e-29 132.5 89 69.7
CARHR237930 Cardamine hirsuta HOM05D004945 ORTHO05D005536 2.2e-29 132.1 93 66.7
PSO063G0987 Papaver somniferum HOM05D004945 ORTHO05D005536 2.2e-29 132.1 88 64.8
PSO170G0997 Papaver somniferum HOM05D004945 ORTHO05D005536 2.2e-29 132.1 88 64.8
Thhalv10026677m.g Eutrema salsugineum HOM05D004945 ORTHO05D005536 2.9e-29 131.7 93 66.7
Psat1g144120 Pisum sativum HOM05D004945 ORTHO05D005536 2.9e-29 131.7 87 69.0
BcaNung00508 Brassica carinata HOM05D004945 ORTHO05D005536 3.7e-29 131.3 93 66.7
Medtr2g037990 Medicago truncatula HOM05D004945 ORTHO05D005536 4.9e-29 131.0 87 66.7
AL7G22230 Arabidopsis lyrata HOM05D004945 ORTHO05D005536 6.4e-29 130.6 93 66.7
THA.LOC104814658 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 6.4e-29 130.6 93 67.7
AT4G30010 Arabidopsis thaliana HOM05D004945 ORTHO05D005536 8.3e-29 130.2 93 65.6
Ah.04g153390 Amaranthus hybridus HOM05D004945 ORTHO05D005536 1.1e-28 129.8 89 65.2
Lalb_Chr11g0074741 Lupinus albus HOM05D004945 ORTHO05D005536 1.1e-28 129.8 93 62.4
AUR62018340 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.4e-28 129.4 89 65.2
AUR62044702 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.4e-28 129.4 89 65.2
AUR62044703 Chenopodium quinoa HOM05D004945 ORTHO05D005536 1.4e-28 129.4 89 65.2
A03p59370 Brassica napus HOM05D004945 ORTHO05D005536 1.9e-28 129.0 93 66.7
C07p57400 Brassica napus HOM05D004945 ORTHO05D005536 1.9e-28 129.0 93 66.7
BolC7t46209H Brassica oleracea HOM05D004945 ORTHO05D005536 1.9e-28 129.0 93 66.7
BraA03t14994Z Brassica rapa HOM05D004945 ORTHO05D005536 1.9e-28 129.0 93 66.7
Aa31LG2G20550 Aethionema arabicum HOM05D004945 ORTHO05D005536 3.2e-28 128.3 90 65.6
EL10Ac3g07227 Beta vulgaris HOM05D004945 ORTHO05D005536 3.2e-28 128.3 89 62.9
AUR62031980 Chenopodium quinoa HOM05D004945 ORTHO05D005536 9.2e-28 126.7 82 67.1
AUR62030327 Chenopodium quinoa HOM05D004945 ORTHO05D005536 2.1e-27 125.6 85 65.9
AUR62023991 Chenopodium quinoa HOM05D004945 ORTHO05D005536 3.5e-27 124.8 89 62.9
THA.LOC104811777 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 1.0e-26 123.2 91 62.6
Dinv25512 Davidia involucrata HOM05D004945 ORTHO05D005536 4.0e-23 111.3 68 75.0
THA.LOC109116878 Tarenaya hassleriana HOM05D004945 ORTHO05D005536 3.4e-22 108.2 64 78.1
ECA247G2100 Erigeron canadensis HOM05D004945 ORTHO05D005536 9.9e-22 106.7 90 57.8
A01p08110 Brassica napus HOM05D004945 ORTHO05D005536 9.2e-20 100.1 85 54.1
BcaB03g15243 Brassica carinata HOM05D004945 ORTHO05D005536 1.0e-18 96.7 75 57.3
Nitab4.5_0006750g0010 Nicotiana tabacum HOM05D004945 ORTHO05D005536 1.3e-18 96.3 57 70.2
Os02g0175800 Oryza sativa ssp. japonica HOM05D004945 ORTHO05D005536 2.3e-18 95.5 91 49.5
HanXRQChr15g0497481 Helianthus annuus HOM05D004945 ORTHO05D005536 4.3e-17 91.3 59 64.4
Nitab4.5_0000617g0120 Nicotiana tabacum HOM05D004945 ORTHO05D005536 7.3e-17 90.5 57 66.7
Oeu001819.1 Olea europaea HOM05D004945 ORTHO05D005536 6.2e-16 87.4 80 58.8
PGSC0003DMG400028757 Solanum tuberosum HOM05D004945 ORTHO05D005536 1.8e-15 85.9 60 60.0
GSVIVG01010862001 Vitis vinifera HOM05D004945 ORTHO05D005536 2.0e-14 82.4 56 67.9
arahy.Tifrunner.gnm1.ann1.2FH55K Arachis hypogaea HOM05D004945 ORTHO05D005536 5.8e-14 80.9 57 63.2
arahy.Tifrunner.gnm1.ann1.U71V3Q Arachis hypogaea HOM05D004945 ORTHO05D005536 5.8e-14 80.9 57 63.2
SMO361G0023 Selaginella moellendorffii HOM05D004945 ORTHO05D005536 2.9e-13 78.6 85 40.0
Nn8g40786 Nelumbo nucifera HOM05D004945 ORTHO05D005536 4.9e-13 77.8 44 72.7
Nitab4.5_0002354g0060 Nicotiana tabacum HOM05D004945 ORTHO05D005536 6.4e-13 77.4 45 75.6
Pp3c25_5460 Physcomitrium patens HOM05D004945 ORTHO05D005536 1.1e-09 66.6 84 40.5
Pp3c25_5480 Physcomitrium patens HOM05D004945 ORTHO05D005536 1.1e-09 66.6 84 40.5
Dinv24096 Davidia involucrata HOM05D019947 ORTHO05D005536 1.5e-09 66.2 43 65.1
Dinv44937 Davidia involucrata HOM05D004945 ORTHO05D005536 1.5e-09 66.2 43 65.1
AagrBONN_evm.TU.Sc2ySwM_344.4974 Anthoceros agrestis HOM05D004945 ORTHO05D005536 3.3e-09 65.1 91 35.2
BcaC09g51779 Brassica carinata HOM05D004945 ORTHO05D005536 2.8e-08 62.0 71 42.3
BcaNung06654 Brassica carinata HOM05D004945 ORTHO05D005536 2.8e-08 62.0 71 42.3
Pp3c5_15650 Physcomitrium patens HOM05D004945 ORTHO05D005536 2.8e-08 62.0 92 39.1
CBR_g50842 Chara braunii HOM05D004945 ORTHO05D005536 2.4e-07 58.9 88 38.6
Pp3c5_15280 Physcomitrium patens HOM05D004945 ORTHO05D005536 4.0e-07 58.2 82 30.5
AagrBONN_evm.TU.Sc2ySwM_228.1937 Anthoceros agrestis HOM05D004945 ORTHO05D005536 1.2e-06 56.6 70 37.1
FAN12G2758 Fragaria x ananassa HOM05D034259 ORTHO05D005536 1.2e-06 56.6 35 65.7
FAN17G0629 Fragaria x ananassa HOM05D034259 ORTHO05D005536 1.2e-06 56.6 35 65.7
FAN22G1974 Fragaria x ananassa HOM05D034259 ORTHO05D005536 1.2e-06 56.6 35 65.7


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