Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G059400 Carya illinoinensis HOM05D005280 ORTHO05D006253 1.1e-85 320.9 253 100.0
Cfa000612 Carpinus fangiana HOM05D005280 ORTHO05D006253 1.5e-77 293.9 253 92.1
Haze_06226 Corylus avellana HOM05D005280 ORTHO05D006253 1.3e-76 290.8 253 91.7
Phvul.006G175800 Phaseolus vulgaris HOM05D005280 ORTHO05D006253 2.9e-73 279.6 253 89.3
Ca_00439_v3 Cicer arietinum L. HOM05D005280 ORTHO05D006253 6.5e-73 278.5 253 87.4
Dinv16775 Davidia involucrata HOM05D005280 ORTHO05D006253 6.5e-73 278.5 253 90.1
Lalb_Chr20g0117481 Lupinus albus HOM05D005280 ORTHO05D006253 1.4e-72 277.3 254 88.6
FAN16G3700 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.9e-72 276.9 254 88.6
FvH4_3g07730 Fragaria vesca HOM05D005280 ORTHO05D006253 2.5e-72 276.6 254 88.6
FAN25G0161 Fragaria x ananassa HOM05D005280 ORTHO05D006253 2.5e-72 276.6 254 88.6
Dinv40681 Davidia involucrata HOM05D005280 ORTHO05D006253 3.2e-72 276.2 249 91.2
FAN11G1284 Fragaria x ananassa HOM05D005280 ORTHO05D006253 4.2e-72 275.8 254 88.2
Glyma.13G229400 Glycine max HOM05D005280 ORTHO05D006253 7.2e-72 275.0 253 87.7
FAN21G3704 Fragaria x ananassa HOM05D005280 ORTHO05D006253 1.2e-71 274.2 253 88.1
RcHm_v2.0_Chr5g0010881 Rosa chinensis HOM05D005280 ORTHO05D006253 1.2e-71 274.2 255 88.2
Medtr2g016160 Medicago truncatula HOM05D005280 ORTHO05D006253 2.7e-71 273.1 252 87.3
QL05p047377 Quercus lobata HOM05D005280 ORTHO05D006253 2.7e-71 273.1 253 87.0
ClCG01G023770 Citrullus lanatus HOM05D005280 ORTHO05D006253 6.1e-71 271.9 249 90.4
Ciclev10015974m.g Citrus clementina HOM05D005280 ORTHO05D006253 6.1e-71 271.9 251 88.4
CsaV3_6G050930 Cucumis sativus L. HOM05D005280 ORTHO05D006253 6.1e-71 271.9 249 90.4
MD10G1279400 Malus domestica HOM05D005280 ORTHO05D006253 7.9e-71 271.6 259 86.5
Psat1g197880 Pisum sativum HOM05D005280 ORTHO05D006253 7.9e-71 271.6 248 88.3
MELO3C007211.2 Cucumis melo HOM05D005280 ORTHO05D006253 1.4e-70 270.8 249 90.0
MD05G1300300 Malus domestica HOM05D005280 ORTHO05D006253 1.8e-70 270.4 261 85.8
Atru.chr10.1658 Acer truncatum HOM05D005280 ORTHO05D006253 3.0e-70 269.6 252 87.7
Prupe.4G062000 Prunus persica HOM05D005280 ORTHO05D006253 3.0e-70 269.6 259 84.9
Lj6g0027668 Lotus japonicus HOM05D005280 ORTHO05D006253 3.9e-70 269.2 253 87.0
Manes.17G056200 Manihot esculenta HOM05D005280 ORTHO05D006253 2.0e-69 266.9 253 84.6
ECA236G4327 Erigeron canadensis HOM05D005280 ORTHO05D006253 3.3e-69 266.2 253 87.0
Potri.004G057600 Populus trichocarpa HOM05D005280 ORTHO05D006253 7.4e-69 265.0 251 85.3
arahy.Tifrunner.gnm1.ann1.8U8ZZM Arachis hypogaea HOM05D005280 ORTHO05D006253 9.7e-69 264.6 253 85.4
arahy.Tifrunner.gnm1.ann1.IM81E3 Arachis hypogaea HOM05D005280 ORTHO05D006253 9.7e-69 264.6 253 85.4
TWI38G0304 Tripterygium wilfordii HOM05D005280 ORTHO05D006253 1.7e-68 263.8 254 85.0
Hma1.2p1_1912F.1_g307320 Hydrangea macrophylla HOM05D005280 ORTHO05D006253 2.8e-68 263.1 244 90.2
PGR042G3394 Punica granatum HOM05D005280 ORTHO05D006253 2.8e-68 263.1 253 83.8
THA.LOC104812639 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 4.8e-68 262.3 252 86.1
HanXRQChr05g0139841 Helianthus annuus HOM05D005280 ORTHO05D006253 6.3e-68 261.9 253 86.2
vmacro16064 Vaccinium macrocarpon HOM05D005280 ORTHO05D006253 1.4e-67 260.8 244 89.8
Manes.16G040400 Manihot esculenta HOM05D005280 ORTHO05D006253 3.1e-67 259.6 248 85.1
Rhsim02G0143200 Rhododendron simsii HOM05D005280 ORTHO05D006253 4.1e-67 259.2 244 90.2
Sabra04G0037300 Salix brachista HOM05D005280 ORTHO05D006253 5.3e-67 258.8 248 85.5
Sc05g0007070 Simmondsia chinensis HOM05D005280 ORTHO05D006253 9.1e-67 258.1 253 82.2
THA.LOC104804949 Tarenaya hassleriana HOM05D005280 ORTHO05D006253 9.1e-67 258.1 252 86.1
SHI28515 Sapria himalayana HOM05D005280 ORTHO05D006253 1.2e-66 257.7 253 83.8
Glyma.15G083100 Glycine max HOM05D005280 ORTHO05D006253 2.0e-66 256.9 143 82.5
Duzib160G0285 Durio zibethinus HOM05D005280 ORTHO05D006253 2.6e-66 256.5 253 84.2
AUR62015144 Chenopodium quinoa HOM05D005280 ORTHO05D006253 4.5e-66 255.8 254 83.5
VMungo0540G1202 Vigna mungo HOM05D005280 ORTHO05D006253 4.5e-66 255.8 143 83.9
AUR62017603 Chenopodium quinoa HOM05D005280 ORTHO05D006253 5.9e-66 255.4 254 83.1
Lsat_1_v5_gn_7_24160 Lactuca sativa HOM05D005280 ORTHO05D006253 1.0e-65 254.6 247 86.6
Aa31LG6G6330 Aethionema arabicum HOM05D005280 ORTHO05D006253 5.0e-65 252.3 251 84.1
Ah.01g013480 Amaranthus hybridus HOM05D005280 ORTHO05D006253 1.1e-64 251.1 254 81.9
Sed0011601 Sechium edule HOM05D005280 ORTHO05D006253 1.5e-64 250.8 143 83.2
CANSAT80G2107 Cannabis sativa HOM05D005280 ORTHO05D006253 1.9e-64 250.4 143 81.1
AT1G29260 Arabidopsis thaliana HOM05D005280 ORTHO05D006253 2.5e-64 250.0 253 83.8
SGA_v2.0_scaffold1G00053 Striga asiatica HOM05D005280 ORTHO05D006253 3.2e-64 249.6 251 84.1
Peaxi162Scf00871g00047 Petunia axillaris HOM05D005280 ORTHO05D006253 5.5e-64 248.8 253 83.4
PGSC0003DMG400008719 Solanum tuberosum HOM05D005280 ORTHO05D006253 5.5e-64 248.8 253 82.6
Solyc03g062940.3 Solanum lycopersicum HOM05D005280 ORTHO05D006253 7.2e-64 248.4 253 82.6
Sopen03g015240 Solanum pennellii HOM05D005280 ORTHO05D006253 7.2e-64 248.4 253 82.6
PGSC0003DMG400009000 Solanum tuberosum HOM05D005280 ORTHO05D006253 7.2e-64 248.4 253 82.6
CSS0022801 Camellia sinensis var. sinensis HOM05D005280 ORTHO05D006253 9.4e-64 248.1 143 81.1
Carub.0001s2739 Capsella rubella HOM05D005280 ORTHO05D006253 1.2e-63 247.7 253 82.6
Actinidia39510 Actinidia chinensis HOM05D005280 ORTHO05D006253 2.1e-63 246.9 143 81.1
Thhalv10008237m.g Eutrema salsugineum HOM05D005280 ORTHO05D006253 2.7e-63 246.5 251 82.9
Sp1g25120 Schrenkiella parvula HOM05D005280 ORTHO05D006253 2.7e-63 246.5 250 83.6
BcaC05g26943 Brassica carinata HOM05D005280 ORTHO05D006253 4.7e-63 245.7 252 82.5
A09p37140 Brassica napus HOM05D005280 ORTHO05D006253 4.7e-63 245.7 252 82.5
C05p27910 Brassica napus HOM05D005280 ORTHO05D006253 4.7e-63 245.7 252 82.5
BolC5t31517H Brassica oleracea HOM05D005280 ORTHO05D006253 4.7e-63 245.7 252 82.5
BraA09t39230Z Brassica rapa HOM05D005280 ORTHO05D006253 4.7e-63 245.7 252 82.5
Lj1A206T60 Lonicera japonica HOM05D005280 ORTHO05D006253 6.1e-63 245.4 144 79.2
CAN.G206.30 Capsicum annuum HOM05D005280 ORTHO05D006253 8.0e-63 245.0 253 81.8
CARHR028510 Cardamine hirsuta HOM05D005280 ORTHO05D006253 8.0e-63 245.0 250 82.8
DCAR_007943 Daucus carota HOM05D005280 ORTHO05D006253 8.0e-63 245.0 143 80.4
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.4e-62 244.2 253 81.0
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.8e-62 243.8 253 81.0
HPP92_008751 Vanilla planifolia HOM05D005280 ORTHO05D006253 2.3e-62 243.4 252 81.7
EL10Ac9g22853 Beta vulgaris HOM05D005280 ORTHO05D006253 4.0e-62 242.7 143 79.7
unitig_699.g19366 Utricularia gibba HOM05D005280 ORTHO05D006253 4.0e-62 242.7 249 83.1
Aqoxy170s003 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 1.5e-61 240.7 143 78.3
Aqoxy7G03216 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 1.5e-61 240.7 143 78.3
COL.COLO4_31288 Corchorus olitorius HOM05D005280 ORTHO05D006253 1.5e-61 240.7 143 78.3
MBI05_g10770_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.6e-61 240.0 143 78.3
MBI07_g43934_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 2.6e-61 240.0 143 79.0
Cc02_g15040 Coffea canephora HOM05D005280 ORTHO05D006253 4.4e-61 239.2 146 78.1
Migut.M01035 Erythranthe guttata HOM05D005280 ORTHO05D006253 7.5e-61 238.4 243 84.8
PSO229G0003 Papaver somniferum HOM05D005280 ORTHO05D006253 7.5e-61 238.4 143 77.6
Duzib192G0183 Durio zibethinus HOM05D005280 ORTHO05D006253 1.3e-60 237.7 144 77.1
TAR629G2088 Trochodendron aralioides HOM05D005280 ORTHO05D006253 1.3e-60 237.7 143 76.9
Thecc.06G170100 Theobroma cacao HOM05D005280 ORTHO05D006253 2.8e-60 236.5 144 78.5
PSO675G8759 Papaver somniferum HOM05D005280 ORTHO05D006253 4.8e-60 235.7 143 76.2
Nn1g04427 Nelumbo nucifera HOM05D005280 ORTHO05D006253 6.3e-60 235.3 143 76.9
MSTRG.7412 Avicennia marina HOM05D005280 ORTHO05D006253 1.4e-59 234.2 143 77.6
Gohir.A10G036800 Gossypium hirsutum HOM05D005280 ORTHO05D006253 1.4e-59 234.2 143 76.2
Gorai.011G039400 Gossypium raimondii HOM05D005280 ORTHO05D006253 3.1e-59 233.0 143 76.2
BcaC01g00082 Brassica carinata HOM05D005280 ORTHO05D006253 4.1e-59 232.6 143 75.5
C03p75590 Brassica napus HOM05D005280 ORTHO05D006253 4.1e-59 232.6 143 75.5
BolC3t19816H Brassica oleracea HOM05D005280 ORTHO05D006253 4.1e-59 232.6 143 75.5
BcaB03g12145 Brassica carinata HOM05D005280 ORTHO05D006253 7.0e-59 231.9 143 75.5
Gohir.D10G037400 Gossypium hirsutum HOM05D005280 ORTHO05D006253 7.0e-59 231.9 143 75.5
BcaB07g32507 Brassica carinata HOM05D005280 ORTHO05D006253 9.1e-59 231.5 143 74.1
BraA08t34477Z Brassica rapa HOM05D005280 ORTHO05D006253 9.1e-59 231.5 143 74.8
AL1G42940 Arabidopsis lyrata HOM05D005280 ORTHO05D006253 5.0e-57 225.7 143 73.4
CDE10G0374 Ceratophyllum demersum HOM05D005280 ORTHO05D006253 2.5e-56 223.4 143 71.3
Cpa.g.sc7.74 Carica papaya HOM05D005280 ORTHO05D006253 1.4e-46 191.0 253 76.7
SMO119G0322 Selaginella moellendorffii HOM05D005280 ORTHO05D006253 5.2e-46 189.1 143 63.6
Mapoly0030s0014 Marchantia polymorpha HOM05D005280 ORTHO05D006253 6.8e-46 188.7 143 60.8
Pp3c17_8040 Physcomitrium patens HOM05D005280 ORTHO05D006253 7.5e-45 185.3 143 60.1
PSO782G3364 Papaver somniferum HOM05D005280 ORTHO05D006253 1.4e-43 181.0 115 71.3
Zm00001eb238680 Zea mays HOM05D005280 ORTHO05D006253 9.2e-43 178.3 144 56.9
A08p25250 Brassica napus HOM05D005280 ORTHO05D006253 1.6e-42 177.6 143 60.1
Cre17.g730200 Chlamydomonas reinhardtii HOM05D005280 ORTHO05D006253 1.0e-41 174.9 139 56.8
Sabra11G0048200 Salix brachista HOM05D005280 ORTHO05D006253 2.8e-39 166.8 210 79.0
Aqoxy1G02047 Aquilegia oxysepala HOM05D005280 ORTHO05D006253 4.7e-39 166.0 106 73.6
AagrBONN_evm.TU.Sc2ySwM_117.3414 Anthoceros agrestis HOM05D005280 ORTHO05D006253 4.0e-38 162.9 144 56.9
PRCOL_00004365 Prasinoderma coloniale HOM05D005280 ORTHO05D006253 2.0e-34 150.6 110 64.5
CBR_g23503 Chara braunii HOM05D005280 ORTHO05D006253 4.6e-34 149.4 141 54.6
SEGI_31924 Sequoiadendron giganteum HOM05D005280 ORTHO05D006253 1.0e-33 148.3 254 66.1
ATR0706G060 Amborella trichopoda HOM05D005280 ORTHO05D006253 1.5e-29 134.4 114 60.5
MCO15G120 Micromonas commoda HOM05D005280 ORTHO05D006253 1.7e-28 131.0 109 55.0
Pp3c15_2410 Physcomitrium patens HOM05D005280 ORTHO05D006253 4.1e-27 126.3 132 47.7
AUR62034161 Chenopodium quinoa HOM05D005280 ORTHO05D006253 2.2e-20 104.0 143 41.3
MBI16_g15539_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.7e-17 94.4 143 38.5
MBI16_g15538_MAGBIO Magnolia biondii HOM05D005280 ORTHO05D006253 1.2e-15 88.2 143 36.4
Dinv41375 Davidia involucrata HOM05D000140 ORTHO05D000087 4.4e-13 79.7 134 42.5
Potri.011G066600 Populus trichocarpa HOM05D005280 ORTHO05D006253 2.4e-11 73.9 142 76.8
FAN14G0286 Fragaria x ananassa HOM05D005280 ORTHO05D019446 3.2e-11 73.6 118 39.0
VMungo1383G1864 Vigna mungo HOM05D005280 ORTHO05D006253 2.7e-10 70.5 35 88.6
VMungo0331G0944 Vigna mungo HOM05D005280 ORTHO05D006253 1.0e-09 68.6 136 78.7
Cfa022092 Carpinus fangiana HOM05D000164 ORTHO05D121826 1.1e-06 58.5 92 37.0
BcaB01g04544 Brassica carinata HOM05D000347 ORTHO05D001997 3.1e-06 57.0 136 30.1


User provided reference genes

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