Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 5.1e-235 817.4 422 100.0
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 8.2e-100 368.2 481 50.3
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 1.4e-94 350.9 435 51.5
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 9.1e-91 338.2 422 51.2
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 7.3e-80 302.0 411 46.5
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.0e-78 298.1 324 58.0
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 2.9e-76 290.0 428 45.3
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 2.5e-72 276.9 462 44.2
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.1e-70 271.6 426 44.1
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 2.3e-70 270.4 454 41.9
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.4e-69 266.2 426 43.2
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.2e-68 263.8 463 42.3
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 2.9e-68 263.5 459 41.8
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 2.4e-67 260.4 474 39.9
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 9.2e-67 258.5 508 39.2
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 2.1e-66 257.3 474 39.7
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 5.1e-65 252.7 447 42.1
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.7e-63 246.1 443 41.1
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.1e-62 245.0 441 40.6
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.4e-62 244.6 442 40.5
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 4.0e-62 243.0 441 40.6
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.5e-61 241.1 481 37.6
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 3.2e-59 233.4 506 37.4
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 4.1e-59 233.0 473 38.3
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 7.8e-58 228.8 459 38.1
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 1.7e-57 227.6 412 40.0
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 7.3e-56 222.2 442 39.6
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 9.5e-56 221.9 475 38.3
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.6e-55 221.1 252 54.0
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.1e-54 218.4 432 37.0
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 1.4e-54 218.0 442 38.9
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.7e-52 211.1 461 35.8
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 2.9e-52 210.3 429 37.1
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 7.1e-51 205.7 428 38.3
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 7.8e-50 202.2 458 36.0
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 1.3e-49 201.4 455 35.6
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 4.3e-48 196.4 448 35.7
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 2.1e-47 194.1 433 36.3
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 4.7e-47 193.0 448 37.1
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 1.1e-46 191.8 456 33.8
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 8.4e-44 182.2 428 32.9
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.2e-42 178.3 473 32.8
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.1e-42 177.6 432 35.0
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 7.8e-42 175.6 341 38.7
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 7.3e-40 169.1 412 35.7
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 2.4e-38 164.1 424 33.5
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.2e-37 161.8 432 34.7
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 2.6e-37 160.6 328 38.1
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 3.4e-37 160.2 321 38.0
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 7.6e-37 159.1 425 33.9
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 9.9e-37 158.7 445 31.7
QL05p044176 Quercus lobata HOM05D007489 ORTHO05D008037 1.3e-36 158.3 161 62.1
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 3.8e-36 156.8 288 42.4
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.9e-35 154.5 477 30.4
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 3.5e-34 150.2 463 33.7
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 6.0e-34 149.4 387 34.9
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 7.9e-34 149.1 463 31.7
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.0e-33 148.7 164 52.4
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 2.3e-33 147.5 254 40.9
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 8.7e-33 145.6 451 31.7
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.5e-32 144.8 418 34.9
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.5e-32 144.8 443 32.1
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 3.3e-32 143.7 416 35.3
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 3.3e-32 143.7 166 54.2
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.8e-30 137.9 405 33.8
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 2.4e-30 137.5 406 34.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 5.3e-30 136.3 375 29.6
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 3.4e-29 133.7 407 31.7
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 3.4e-29 133.7 407 31.7
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 5.8e-29 132.9 260 40.0
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 7.6e-29 132.5 283 37.5
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 6.4e-28 129.4 410 30.0
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 1.4e-27 128.3 369 33.1
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 7.1e-27 125.9 444 33.1
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 1.5e-24 118.2 341 32.3
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 1.6e-23 114.8 214 40.7
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 1.6e-23 114.8 208 40.4
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 8.2e-23 112.5 260 36.5
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 1.1e-22 112.1 432 26.9
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 2.4e-22 110.9 235 36.2
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 5.3e-22 109.8 224 35.7
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.3e-22 109.8 272 33.1
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 6.9e-22 109.4 456 29.8
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 6.9e-22 109.4 272 33.1
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.2e-21 108.6 286 34.3
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 4.5e-21 106.7 417 28.5
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 8.4e-20 102.4 290 32.1
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 7.7e-13 79.3 207 31.4
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 7.7e-13 79.3 182 33.0
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.0e-12 79.0 182 33.0
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 1.7e-12 78.2 176 38.1
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 2.5e-11 74.3 65 61.5
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 3.2e-11 73.9 359 24.0
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 3.2e-11 73.9 64 53.1
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 3.6e-10 70.5 64 51.6
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 1.0e-09 68.9 67 58.2
CDE08G0488 Ceratophyllum demersum HOM05D049506 ORTHO05D043857 5.1e-09 66.6 385 26.2
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 2.0e-08 64.7 51 56.9
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 2.5e-08 64.3 51 56.9
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-07 60.1 325 27.7


User provided reference genes

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