Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 1.0e-105 386.7 195 100.0
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.3e-84 316.6 169 92.3
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.0e-81 307.0 164 90.9
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 3.0e-81 305.4 167 88.0
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 3.5e-77 292.0 181 80.1
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 5.0e-76 288.1 203 75.4
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 5.0e-76 288.1 166 84.9
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 5.0e-76 288.1 166 84.9
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 5.0e-76 288.1 185 81.1
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 6.5e-76 287.7 161 88.8
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 8.6e-76 287.3 195 76.4
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.9e-75 286.2 166 84.3
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 9.5e-75 283.9 166 83.1
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 1.6e-74 283.1 180 77.2
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.6e-74 283.1 171 81.3
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 2.8e-74 282.3 161 85.1
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 3.6e-74 282.0 173 81.5
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 6.1e-74 281.2 181 77.9
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 6.1e-74 281.2 162 84.0
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 8.0e-74 280.8 173 78.6
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 8.0e-74 280.8 176 77.8
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 1.0e-73 280.4 185 76.8
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 1.0e-73 280.4 187 76.5
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 4.0e-73 278.5 197 73.6
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 4.0e-73 278.5 163 83.4
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 4.0e-73 278.5 186 75.8
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 4.0e-73 278.5 182 78.0
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 8.8e-73 277.3 167 80.2
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.2e-72 276.9 160 83.1
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 1.2e-72 276.9 199 73.4
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 1.2e-72 276.9 199 73.4
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.0e-72 276.2 199 71.9
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 3.4e-72 275.4 180 77.8
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 3.4e-72 275.4 164 84.1
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 4.4e-72 275.0 161 81.4
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 7.5e-72 274.2 163 81.6
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 7.5e-72 274.2 172 80.2
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 7.5e-72 274.2 171 79.5
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 7.5e-72 274.2 160 83.8
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 1.7e-71 273.1 172 77.9
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 1.7e-71 273.1 187 74.9
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 2.2e-71 272.7 156 85.3
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 6.3e-71 271.2 158 84.8
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 8.3e-71 270.8 171 77.8
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 1.1e-70 270.4 153 85.0
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 2.4e-70 269.2 153 84.3
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 4.1e-70 268.5 185 74.6
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 5.4e-70 268.1 159 82.4
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 5.4e-70 268.1 152 85.5
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 5.4e-70 268.1 163 80.4
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 5.4e-70 268.1 189 70.9
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 7.0e-70 267.7 167 79.6
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.2e-69 266.9 171 77.8
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.2e-69 266.9 153 83.7
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 2.7e-69 265.8 165 78.2
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 4.5e-69 265.0 154 83.8
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.5e-69 265.0 151 83.4
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 4.5e-69 265.0 151 84.8
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 4.5e-69 265.0 151 84.8
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 1.3e-68 263.5 159 81.1
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 1.3e-68 263.5 158 82.3
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.7e-68 263.1 150 85.3
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 1.7e-68 263.1 151 84.1
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 2.9e-68 262.3 150 84.0
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 3.3e-67 258.8 159 79.2
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 5.6e-67 258.1 151 80.8
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 7.3e-67 257.7 160 79.4
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 1.6e-66 256.5 181 72.9
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.6e-66 256.5 182 71.4
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 2.1e-66 256.1 148 83.1
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.6e-66 255.4 160 78.1
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 4.7e-66 255.0 158 77.8
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 3.4e-64 248.8 160 80.6
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 7.5e-64 247.7 160 80.0
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 7.5e-64 247.7 160 80.0
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 9.8e-64 247.3 236 58.9
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 5.4e-62 241.5 154 76.6
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 1.2e-61 240.4 138 82.6
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 2.0e-61 239.6 158 77.2
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 2.3e-60 236.1 181 69.6
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.3e-60 236.1 138 83.3
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 5.0e-60 235.0 185 68.6
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 8.6e-60 234.2 124 89.5
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 8.6e-60 234.2 156 76.3
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 2.5e-59 232.6 157 75.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 3.3e-59 232.3 182 69.2
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 4.3e-59 231.9 160 69.4
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 7.3e-59 231.1 152 72.4
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.6e-58 229.9 168 71.4
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 2.8e-58 229.2 149 72.5
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 3.6e-58 228.8 156 67.9
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 2.3e-57 226.1 204 65.2
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 9.8e-56 220.7 163 72.4
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 1.3e-55 220.3 160 66.2
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 8.3e-47 191.0 159 64.2
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.3e-44 183.7 150 64.7
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 3.9e-44 182.2 116 73.3
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 2.1e-42 176.4 124 75.0
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 2.8e-42 176.0 106 77.4
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 3.1e-41 172.6 148 62.2
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 7.6e-40 167.9 115 64.3
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 2.9e-39 166.0 152 53.9
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 3.9e-36 155.6 166 50.0
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 1.9e-35 153.3 96 77.1
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 7.3e-35 151.4 97 77.3
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 7.3e-35 151.4 189 48.1
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 1.7e-31 140.2 79 75.9
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 2.2e-31 139.8 152 43.4
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 7.1e-30 134.8 151 47.7
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-20 104.0 64 70.3
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.8e-20 103.6 149 45.6
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 9.0e-17 91.3 79 63.3
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 3.1e-09 66.2 42 76.2


User provided reference genes

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