Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 7.4e-99 364.4 228 100.0
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.7e-48 196.4 235 57.4
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.3e-39 167.5 252 49.6
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 8.3e-34 148.3 246 45.5
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.6e-32 144.1 189 52.9
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.6e-32 144.1 189 52.9
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.7e-23 114.0 260 45.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.3e-23 113.6 247 38.9
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.9e-22 110.5 124 56.5
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 1.2e-21 107.8 264 46.2
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 1.2e-19 101.3 267 46.8
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 5.8e-19 99.0 296 37.8
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 2.2e-18 97.1 228 45.2
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 2.9e-18 96.7 270 41.9
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 2.9e-18 96.7 235 42.1
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 4.9e-18 95.9 194 37.6
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.9e-18 95.9 235 47.2
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 6.4e-18 95.5 237 47.7
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 6.4e-18 95.5 178 39.3
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.4e-17 94.4 248 35.9
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.6e-16 90.9 267 37.8
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 3.5e-16 89.7 187 40.1
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 3.5e-16 89.7 244 35.7
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 4.6e-16 89.4 267 34.8
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 4.6e-16 89.4 227 43.2
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 6.0e-16 89.0 295 39.0
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 6.0e-16 89.0 226 38.9
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 7.8e-16 88.6 130 46.2
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 7.8e-16 88.6 269 31.2
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 1.0e-15 88.2 135 46.7
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.3e-15 87.8 183 41.0
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.3e-15 87.8 237 41.4
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 1.3e-15 87.8 248 32.3
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 1.7e-15 87.4 176 38.6
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 3.0e-15 86.7 222 50.9
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.9e-15 86.3 127 48.8
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 3.9e-15 86.3 118 49.2
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 6.6e-15 85.5 283 32.5
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 6.6e-15 85.5 102 52.0
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 6.6e-15 85.5 125 46.4
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 8.6e-15 85.1 129 45.0
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 8.6e-15 85.1 126 48.4
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 8.6e-15 85.1 126 47.6
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 8.6e-15 85.1 213 37.6
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.1e-14 84.7 128 40.6
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-14 84.7 126 46.8
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.5e-14 84.3 213 37.1
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.5e-14 84.3 246 36.2
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.5e-14 84.3 235 35.7
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.5e-14 84.3 135 45.2
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 3.3e-14 83.2 269 34.2
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.3e-14 82.8 249 47.8
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 4.3e-14 82.8 249 47.8
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 5.6e-14 82.4 258 32.2
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.6e-14 82.4 270 36.7
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 9.5e-14 81.6 265 38.9
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 9.5e-14 81.6 245 44.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 9.5e-14 81.6 270 36.7
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 9.5e-14 81.6 123 42.3
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 1.2e-13 81.3 268 31.3
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.6e-13 80.9 253 32.4
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.6e-13 80.9 183 37.7
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.6e-13 80.9 183 37.7
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 1.6e-13 80.9 262 42.4
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 2.1e-13 80.5 95 52.6
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-13 80.1 101 50.5
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 4.7e-13 79.3 89 53.9
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 1.4e-12 77.8 168 38.1
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.4e-12 77.8 119 46.2
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.4e-12 77.8 221 32.6
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 2.3e-12 77.0 85 54.1
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.0e-12 76.3 123 46.3
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 4.0e-12 76.3 94 53.2
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.2e-12 75.9 126 44.4
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 6.8e-12 75.5 96 45.8
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 8.9e-12 75.1 268 35.8
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 1.5e-11 74.3 98 51.0
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 2.0e-11 73.9 82 57.3
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 2.0e-11 73.9 320 29.7
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 2.6e-11 73.6 244 32.4
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 7.6e-11 72.0 109 48.6
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 9.9e-11 71.6 159 37.7
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 1.3e-10 71.2 81 49.4
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 4.9e-10 69.3 120 43.3
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.4e-10 68.9 169 37.9
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 8.4e-10 68.6 268 26.9
Manes.16G031700 Manihot esculenta HOM05D007160 ORTHO05D005331 1.1e-09 68.2 111 45.0
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.4e-09 67.8 249 30.1
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 3.2e-09 66.6 261 34.9
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.4e-09 65.9 76 53.9
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 1.6e-08 64.3 126 38.1
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 2.1e-08 63.9 74 45.9
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 2.7e-08 63.5 134 34.3
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 3.5e-08 63.2 296 35.8
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 6.0e-08 62.4 89 44.9
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 7.8e-08 62.0 103 43.7
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 7.8e-08 62.0 278 30.9
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 7.8e-08 62.0 169 34.9
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 3.9e-07 59.7 299 30.1
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.1e-06 58.2 125 35.2
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 1.9e-06 57.4 261 40.6
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 4.3e-06 56.2 133 38.3
Eucgr.E03246 Eucalyptus grandis HOM05D049980 ORTHO05D005331 4.3e-06 56.2 142 37.3
Nn1g04227 Nelumbo nucifera HOM05D018497 ORTHO05D021348 7.3e-06 55.5 89 41.6


User provided reference genes

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