Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G048600 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.1e-26 122.5 60 100.0
CiPaw.09G190000 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.5e-23 112.1 60 93.3
CiPaw.14G095500 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.3e-22 109.0 60 91.7
CiPaw.02G038300 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.7e-22 108.6 60 91.7
CiPaw.12G057000 Carya illinoinensis HOM05D007758 ORTHO05D009788 1.2e-20 102.4 60 86.7
CiPaw.14G095700 Carya illinoinensis HOM05D007758 ORTHO05D009788 6.0e-20 100.1 60 81.7
Lsat_1_v5_gn_6_90760 Lactuca sativa HOM05D007758 ORTHO05D009788 8.1e-17 89.7 60 75.0
Cfa012357 Carpinus fangiana HOM05D007758 ORTHO05D009788 2.3e-16 88.2 62 72.6
Thecc.03G237200 Theobroma cacao HOM05D007758 ORTHO05D009788 1.5e-15 85.5 56 75.0
CSS0049692 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 2.6e-15 84.7 60 71.7
Hma1.2p1_1673F.1_g296900 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 7.5e-15 83.2 60 73.3
CsaV3_3G049700 Cucumis sativus L. HOM05D007758 ORTHO05D009788 9.8e-15 82.8 61 70.5
THA.LOC104814457 Tarenaya hassleriana HOM05D007758 ORTHO05D009788 9.8e-15 82.8 60 71.7
TAR633G2270 Trochodendron aralioides HOM05D007758 ORTHO05D009788 1.7e-14 82.0 54 74.1
Sed0000899 Sechium edule HOM05D007758 ORTHO05D009788 2.2e-14 81.6 54 72.2
ClCG09G012550 Citrullus lanatus HOM05D007758 ORTHO05D009788 2.9e-14 81.3 54 72.2
Manes.15G171100 Manihot esculenta HOM05D007758 ORTHO05D009788 2.9e-14 81.3 60 71.7
Oeu035101.1 Olea europaea HOM05D007758 ORTHO05D009788 2.9e-14 81.3 62 72.6
MELO3C003346.2 Cucumis melo HOM05D007758 ORTHO05D009788 3.7e-14 80.9 54 72.2
Migut.E00814 Erythranthe guttata HOM05D007758 ORTHO05D009788 6.4e-14 80.1 57 70.2
TAR629G0116 Trochodendron aralioides HOM05D007758 ORTHO05D009788 8.3e-14 79.7 54 75.9
CSS0001994 Camellia sinensis var. sinensis HOM05D007758 ORTHO05D009788 1.1e-13 79.3 54 72.2
CANSAT21G1691 Cannabis sativa HOM05D007758 ORTHO05D009788 1.1e-13 79.3 60 70.0
DCAR_008312 Daucus carota HOM05D007758 ORTHO05D009788 1.9e-13 78.6 60 70.0
Thhalv10026742m.g Eutrema salsugineum HOM05D007758 ORTHO05D009788 1.9e-13 78.6 60 70.0
AL7G37620 Arabidopsis lyrata HOM05D007758 ORTHO05D009788 3.2e-13 77.8 60 70.0
BcaB04g18382 Brassica carinata HOM05D007758 ORTHO05D009788 3.2e-13 77.8 60 70.0
BraA08t33271Z Brassica rapa HOM05D007758 ORTHO05D009788 5.4e-13 77.0 60 68.3
Nn1g00706 Nelumbo nucifera HOM05D007758 ORTHO05D009788 5.4e-13 77.0 60 66.7
Prupe.5G051100 Prunus persica HOM05D007758 ORTHO05D009788 7.1e-13 76.6 60 66.7
Hma1.2p1_0414F.1_g147490 Hydrangea macrophylla HOM05D007758 ORTHO05D009788 9.2e-13 76.3 52 71.2
Peaxi162Scf00715g00026 Petunia axillaris HOM05D007758 ORTHO05D009788 9.2e-13 76.3 60 65.0
PGR042G0139 Punica granatum HOM05D007758 ORTHO05D009788 9.2e-13 76.3 60 66.7
AT4G17085 Arabidopsis thaliana HOM05D007758 ORTHO05D009788 1.2e-12 75.9 60 68.3
CAN.G1445.11 Capsicum annuum HOM05D007758 ORTHO05D009788 1.6e-12 75.5 59 64.4
COL.COLO4_06700 Corchorus olitorius HOM05D007758 ORTHO05D009788 2.1e-12 75.1 62 66.1
Gohir.D09G192200 Gossypium hirsutum HOM05D007758 ORTHO05D009788 2.1e-12 75.1 61 67.2
Gorai.006G215000 Gossypium raimondii HOM05D007758 ORTHO05D009788 2.1e-12 75.1 61 67.2
Carub.0007s2429 Capsella rubella HOM05D007758 ORTHO05D009788 2.7e-12 74.7 60 66.7
Glyma.05G067900 Glycine max HOM05D007758 ORTHO05D009788 3.5e-12 74.3 60 60.0
Phvul.003G226800 Phaseolus vulgaris HOM05D007758 ORTHO05D009788 3.5e-12 74.3 60 61.7
PGSC0003DMG400001836 Solanum tuberosum HOM05D007758 ORTHO05D009788 3.5e-12 74.3 59 61.0
CARHR223670 Cardamine hirsuta HOM05D007758 ORTHO05D009788 4.6e-12 73.9 60 66.7
Cc08_g01520 Coffea canephora HOM05D007758 ORTHO05D009788 6.0e-12 73.6 55 67.3
Oeu017314.1 Olea europaea HOM05D007758 ORTHO05D009788 6.0e-12 73.6 57 66.7
arahy.Tifrunner.gnm1.ann1.24R365 Arachis hypogaea HOM05D007758 ORTHO05D009788 7.8e-12 73.2 55 63.6
arahy.Tifrunner.gnm1.ann1.EY31BM Arachis hypogaea HOM05D007758 ORTHO05D009788 7.8e-12 73.2 55 63.6
Medtr4g099120 Medicago truncatula HOM05D007758 ORTHO05D009788 7.8e-12 73.2 60 63.3
BcaC07g38037 Brassica carinata HOM05D007758 ORTHO05D009788 1.0e-11 72.8 56 66.1
A08p12870 Brassica napus HOM05D007758 ORTHO05D009788 1.0e-11 72.8 56 66.1
BolC8t48433H Brassica oleracea HOM05D007758 ORTHO05D009788 1.0e-11 72.8 56 66.1
Ca_22029_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.0e-11 72.8 60 65.0
Ca_28157_v3 Cicer arietinum L. HOM05D007758 ORTHO05D009788 1.3e-11 72.4 60 65.0
Potri.003G085400 Populus trichocarpa HOM05D007758 ORTHO05D009788 1.3e-11 72.4 75 54.7
C07p48590 Brassica napus HOM05D007758 ORTHO05D009788 1.7e-11 72.0 60 66.7
BolC7t45367H Brassica oleracea HOM05D007758 ORTHO05D009788 1.7e-11 72.0 60 66.7
Gohir.A09G197600 Gossypium hirsutum HOM05D007758 ORTHO05D009788 1.7e-11 72.0 49 75.5
RcHm_v2.0_Chr6g0259711 Rosa chinensis HOM05D007758 ORTHO05D009788 1.7e-11 72.0 60 65.0
A03p50300 Brassica napus HOM05D007758 ORTHO05D009788 2.3e-11 71.6 60 66.7
BraA03t14119Z Brassica rapa HOM05D007758 ORTHO05D009788 2.3e-11 71.6 60 66.7
MD04G1056100 Malus domestica HOM05D007758 ORTHO05D009788 3.0e-11 71.2 59 64.4
BcaC06g33532 Brassica carinata HOM05D007758 ORTHO05D009788 3.9e-11 70.9 60 65.0
BcaNung04665 Brassica carinata HOM05D007758 ORTHO05D009788 3.9e-11 70.9 60 65.0
Ciclev10023239m.g Citrus clementina HOM05D007758 ORTHO05D009788 3.9e-11 70.9 60 65.0
Glyma.17G150000 Glycine max HOM05D007758 ORTHO05D009788 3.9e-11 70.9 60 60.0
Medtr3g053460 Medicago truncatula HOM05D007758 ORTHO05D009788 3.9e-11 70.9 60 61.7
TWI60G0956 Tripterygium wilfordii HOM05D007758 ORTHO05D009788 6.6e-11 70.1 56 64.3
PSO782G2991 Papaver somniferum HOM05D007758 ORTHO05D009788 8.6e-11 69.7 56 57.1
GSVIVG01013273001 Vitis vinifera HOM05D007758 ORTHO05D009788 8.6e-11 69.7 45 75.6
Lj4g0024059 Lotus japonicus HOM05D007758 ORTHO05D009788 1.1e-10 69.3 51 64.7
Hund11300 Selenicereus undatus HOM05D007758 ORTHO05D009788 1.1e-10 69.3 52 65.4
TPR.G17254 Trifolium pratense HOM05D007758 ORTHO05D009788 1.5e-10 68.9 60 60.0
Haze_08336 Corylus avellana HOM05D007758 ORTHO05D009788 2.5e-10 68.2 41 78.0
Ca_03905_v3 Cicer arietinum L. HOM05D000421 ORTHO05D009788 3.3e-10 67.8 50 68.0
Psat4g076760 Pisum sativum HOM05D007758 ORTHO05D009788 5.6e-10 67.0 50 66.0
Atru.chr9.1149 Acer truncatum HOM05D007758 ORTHO05D009788 9.5e-10 66.2 48 68.8
FAN13G2273 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.2e-09 65.9 51 66.7
FAN18G3236 Fragaria x ananassa HOM05D007758 ORTHO05D009788 1.2e-09 65.9 51 66.7
Zm00001eb180740 Zea mays HOM05D007758 ORTHO05D009788 6.2e-09 63.5 58 53.4
Lalb_Chr09g0329711 Lupinus albus HOM05D007758 ORTHO05D009788 1.1e-08 62.8 54 55.6
unitig_744.g24437 Utricularia gibba HOM05D007758 ORTHO05D009788 4.0e-08 60.8 93 46.2
FAN08G1799 Fragaria x ananassa HOM05D007758 ORTHO05D009788 3.4e-07 57.8 51 64.7
RcHm_v2.0_Chr7g0205921 Rosa chinensis HOM05D007758 ORTHO05D009788 7.6e-07 56.6 61 54.1
Nitab4.5_0010949g0010 Nicotiana tabacum HOM05D007758 ORTHO05D009788 1.3e-06 55.8 36 72.2
BolC7t45365H Brassica oleracea HOM05D007758 ORTHO05D009788 3.7e-06 54.3 37 73.0
SHI07594 Sapria himalayana HOM05D007758 ORTHO05D009788 6.4e-06 53.5 47 57.4


User provided reference genes

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