Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G044700 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.0e-131 470.3 246 100.0
CiPaw.12G041600 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-93 345.1 309 60.5
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-91 339.3 330 60.6
CiPaw.04G176500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.1e-91 337.4 300 65.7
CiPaw.07G149700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.7e-90 334.3 301 64.8
CiPaw.04G080400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-89 332.8 293 65.2
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.0e-89 331.6 330 58.5
CiPaw.01G075100 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.5e-89 330.9 330 58.8
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-88 330.5 330 59.7
CiPaw.05G100200 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.2e-88 327.8 270 68.1
CiPaw.10G115900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-86 323.6 275 67.3
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-85 318.5 355 54.9
CiPaw.01G097200 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.7e-85 318.2 285 68.1
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.5e-85 317.8 355 54.9
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.2e-84 316.2 355 54.6
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-82 310.1 347 54.8
CiPaw.12G101800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-82 308.1 335 55.5
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.8e-81 305.4 355 53.5
CiPaw.15G067200 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.8e-81 305.4 355 53.5
CiPaw.07G073800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-79 298.5 286 62.6
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-77 293.9 357 52.1
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-77 293.9 357 52.1
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-77 293.9 357 52.1
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-77 293.9 357 52.1
CiPaw.08G047300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-75 285.8 268 58.2
CiPaw.02G091600 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.9e-74 281.6 357 51.0
CiPaw.01G183400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.0e-73 280.8 267 58.1
CiPaw.01G240000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.8e-73 278.9 268 58.6
CiPaw.14G018900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.2e-72 275.4 328 52.1
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-70 270.4 287 58.2
CiPaw.14G061500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-70 270.4 288 56.2
CiPaw.09G151300 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-69 267.3 181 75.1
CiPaw.12G006100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-66 257.3 323 50.2
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.7e-66 256.1 364 48.6
CiPaw.01G118700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-64 248.4 241 56.8
CiPaw.03G134500 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-64 248.4 247 59.5
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.3e-64 248.1 355 46.8
CiPaw.01G146900 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.3e-64 248.1 355 46.5
CiPaw.01G084700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-61 240.7 245 60.0
CiPaw.11G189100 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-61 240.0 193 70.5
CiPaw.03G224700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-61 239.6 261 52.9
CiPaw.14G077500 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.8e-61 237.7 307 50.8
CiPaw.03G093100 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-59 233.0 197 68.0
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.3e-56 222.2 237 51.1
CiPaw.03G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-55 218.4 294 52.7
CiPaw.15G139500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-54 216.9 210 56.7
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.0e-54 215.7 362 42.8
CiPaw.12G107800 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-53 212.2 294 49.3
CiPaw.15G027200 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-53 211.8 186 66.1
CiPaw.03G088100 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.7e-52 209.1 272 46.7
CiPaw.07G134100 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.4e-45 185.7 270 48.1
CiPaw.03G201300 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.1e-43 178.3 244 52.0
HanXRQChr08g0232381 Helianthus annuus HOM05D001576 ORTHO05D000401 3.5e-42 176.0 329 40.1
CiPaw.12G038500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-38 164.5 323 41.2
CiPaw.07G120000 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.1e-35 152.5 272 43.8
CiPaw.01G001000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-29 133.3 91 71.4
CiPaw.11G142700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-29 132.1 80 80.0
CiPaw.16G047100 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.2e-27 126.3 191 48.7
CiPaw.12G041400 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.3e-19 98.2 201 41.8
CiPaw.07G108700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.1e-17 92.4 234 38.5
Haze_16404 Corylus avellana HOM05D020928 ORTHO05D024875 8.1e-15 85.1 201 30.3
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 4.9e-12 75.9 299 26.4
HanXRQChr13g0416031 Helianthus annuus HOM05D001576 ORTHO05D000401 6.0e-10 68.9 80 53.8
QL04p000022 Quercus lobata HOM05D001576 ORTHO05D000401 2.3e-09 67.0 113 37.2
QL05p011416 Quercus lobata HOM05D001576 ORTHO05D016378 1.1e-08 64.7 119 37.0
QL04p003192 Quercus lobata HOM05D001576 ORTHO05D000401 1.5e-08 64.3 166 35.5
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.9e-08 63.9 344 28.2
SGA_v2.0_scaffold85G26708 Striga asiatica HOM05D001576 ORTHO05D000401 1.9e-08 63.9 252 26.2
TWI53G0679 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.3e-08 63.2 301 25.6
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 3.3e-08 63.2 256 24.2
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 4.3e-08 62.8 323 22.9
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 5.6e-08 62.4 169 30.8
RcHm_v2.0_Chr2g0105031 Rosa chinensis HOM05D001576 ORTHO05D010219 5.6e-08 62.4 169 30.8
RcHm_v2.0_Chr7g0231991 Rosa chinensis HOM05D001576 ORTHO05D010219 5.6e-08 62.4 169 30.8
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 1.6e-07 60.8 288 24.0
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 1.6e-07 60.8 169 32.0
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.1e-07 60.5 344 27.3
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.1e-07 60.5 307 28.3
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.1e-07 60.5 344 27.3
QL11p028487 Quercus lobata HOM05D001576 ORTHO05D000401 2.8e-07 60.1 171 36.3
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.7e-07 59.7 182 36.3
QL04p000024 Quercus lobata HOM05D001576 ORTHO05D000401 6.2e-07 58.9 150 27.3
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 1.1e-06 58.2 80 43.8
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.8e-06 57.4 122 35.2
CiPaw.05G230600 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-06 57.0 232 25.4
FAN15G0187 Fragaria x ananassa HOM05D001576 ORTHO05D000401 6.9e-06 55.5 197 28.9
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 9.0e-06 55.1 261 25.7


User provided reference genes

Program Settings