Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 0.0e+00 1177.5 592 100.0
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 1.3e-159 567.4 446 72.9
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 9.7e-131 471.5 412 66.5
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.3e-122 444.5 448 60.9
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 4.4e-115 419.5 532 51.9
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 6.3e-114 415.6 621 46.7
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 8.8e-108 395.2 555 50.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 9.8e-107 391.7 453 56.1
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.1e-105 388.3 467 53.7
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 2.1e-101 374.0 542 47.4
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 4.9e-98 362.8 555 46.1
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 3.9e-95 353.2 559 45.6
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 2.1e-93 347.4 544 46.5
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.2e-91 341.7 575 45.6
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 2.4e-89 334.0 463 50.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 3.9e-87 326.6 458 52.4
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.1e-86 325.1 468 50.9
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 5.6e-86 322.8 448 52.5
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 5.6e-86 322.8 457 50.5
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 3.1e-84 317.0 438 50.2
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 5.2e-84 316.2 453 48.8
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 3.7e-82 310.1 480 47.5
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.4e-81 308.1 552 42.9
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 5.1e-79 299.7 543 40.9
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.9e-78 297.7 458 49.8
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.1e-77 292.4 462 48.5
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 5.4e-73 279.6 445 46.5
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.7e-72 277.3 451 45.0
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 2.3e-71 274.2 448 45.1
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 3.3e-70 270.4 451 45.2
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 4.3e-70 270.0 455 47.0
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 7.3e-70 269.2 479 44.3
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 3.1e-68 263.8 547 39.9
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 3.4e-67 260.4 453 44.4
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 5.8e-67 259.6 535 39.4
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 9.9e-67 258.8 448 43.8
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.2e-66 257.7 430 44.0
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.8e-66 256.9 454 46.0
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 4.2e-65 253.4 455 45.5
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 5.4e-65 253.1 459 42.9
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 6.0e-64 249.6 449 43.4
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 3.9e-63 246.9 534 38.4
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 1.3e-61 241.9 525 40.8
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.8e-60 238.0 573 37.9
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 1.2e-59 235.3 432 43.1
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 1.5e-59 235.0 447 41.2
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 1.5e-59 235.0 447 41.2
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 8.4e-58 229.2 450 43.8
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.1e-57 228.8 387 45.2
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 5.4e-57 226.5 410 47.1
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 7.1e-57 226.1 446 40.8
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.3e-55 221.9 466 41.4
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 6.6e-55 219.5 449 40.8
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 1.6e-53 214.9 401 42.1
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 5.3e-52 209.9 438 39.5
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 5.8e-51 206.5 468 39.1
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 6.4e-50 203.0 536 35.8
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 1.1e-49 202.2 435 39.8
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 2.4e-49 201.1 461 39.7
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 2.1e-48 198.0 440 39.3
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 2.3e-47 194.5 439 41.0
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 3.0e-47 194.1 496 38.3
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 3.9e-47 193.7 465 41.1
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.7e-47 192.6 362 45.0
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 1.1e-46 192.2 439 40.8
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 7.4e-46 189.5 464 39.2
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 2.8e-45 187.6 450 37.8
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 4.0e-44 183.7 500 35.4
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 6.9e-44 183.0 448 37.5
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 2.0e-43 181.4 522 34.3
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 2.7e-40 171.0 506 34.8
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 4.6e-40 170.2 437 38.4
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 7.9e-40 169.5 427 36.8
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 3.9e-39 167.2 519 34.7
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.1e-38 165.6 395 38.5
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 4.8e-37 160.2 466 35.8
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 5.9e-35 153.3 463 34.8
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 2.2e-34 151.4 452 35.0
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 8.4e-34 149.4 450 35.6
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.7e-32 144.4 475 34.3
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 5.7e-30 136.7 459 34.6
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.6e-29 135.2 344 39.0
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.6e-29 135.2 344 39.0
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 3.7e-29 134.0 188 47.3
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 2.4e-28 131.3 266 41.0
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 3.1e-28 131.0 440 34.5
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.2e-27 129.0 594 29.3
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 7.7e-27 126.3 446 33.6
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 2.2e-26 124.8 388 34.3
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 5.0e-26 123.6 447 31.8
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 2.7e-24 117.9 450 34.2
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 8.8e-23 112.8 424 30.9
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 8.8e-23 112.8 424 30.9
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 1.1e-22 112.5 222 36.9
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 2.0e-22 111.7 368 34.0
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.3e-21 109.0 457 31.1
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 2.4e-20 104.8 481 32.6
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 3.4e-19 100.9 73 67.1
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.0e-18 99.4 449 31.0
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 2.9e-18 97.8 121 52.9
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 5.0e-18 97.1 273 36.3
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 8.5e-18 96.3 134 43.3
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 1.1e-17 95.9 490 28.2
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.9e-17 95.1 354 32.2
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 2.7e-16 91.3 448 29.0
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 4.7e-16 90.5 449 29.2
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 6.1e-16 90.1 483 29.6
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.0e-15 89.4 168 40.5
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.8e-15 88.6 454 29.5
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.8e-15 88.6 357 30.0
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 3.0e-15 87.8 138 40.6
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.3e-13 82.4 64 68.8
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 4.8e-13 80.5 537 26.3
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 2.4e-12 78.2 92 47.8
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 3.2e-09 67.8 85 50.6


User provided reference genes

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