Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G039300 Carya illinoinensis HOM05D010787 ORTHO05D011812 4.0e-75 284.6 142 100.0
CiPaw.10G039400 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.4e-61 237.3 130 88.5
CiPaw.13G180200 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.0e-29 132.9 115 57.4
CiPaw.10G106500 Carya illinoinensis HOM05D010787 ORTHO05D011812 2.2e-28 129.4 109 56.9
CiPaw.10G106200 Carya illinoinensis HOM05D010787 ORTHO05D011812 3.7e-28 128.6 109 56.9
CiPaw.10G106400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.8e-27 126.3 109 56.9
CiPaw.10G106000 Carya illinoinensis HOM05D010787 ORTHO05D011812 9.1e-27 124.0 109 56.0
CiPaw.10G108400 Carya illinoinensis HOM05D010787 ORTHO05D011812 1.2e-26 123.6 109 54.1
CiPaw.09G138400 Carya illinoinensis HOM05D010787 ORTHO05D011812 5.0e-25 118.2 123 48.8
CiPaw.14G122000 Carya illinoinensis HOM05D010787 ORTHO05D011812 8.5e-25 117.5 123 52.0
CiPaw.09G138100 Carya illinoinensis HOM05D010787 ORTHO05D011812 7.2e-24 114.4 114 49.1
Rhsim12G0026200 Rhododendron simsii HOM05D010787 ORTHO05D011812 4.0e-22 108.6 113 52.2
vmacro11319 Vaccinium macrocarpon HOM05D010787 ORTHO05D011812 2.0e-13 79.7 206 28.2
Rhsim01G0035000 Rhododendron simsii HOM05D018834 ORTHO05D011812 7.0e-11 71.2 114 36.0
Rhsim01G0028600 Rhododendron simsii HOM05D018834 ORTHO05D011812 1.7e-09 66.6 117 35.0
Rhsim01G0028500 Rhododendron simsii HOM05D018834 ORTHO05D011812 3.8e-09 65.5 119 33.6
Rhsim01G0028900 Rhododendron simsii HOM05D018834 ORTHO05D011812 3.8e-09 65.5 117 34.2
Dinv41569 Davidia involucrata HOM05D008623 ORTHO05D007789 1.9e-08 63.2 118 40.7
PGR083G1822 Punica granatum HOM05D008623 ORTHO05D007789 2.8e-07 59.3 111 34.2
CSS0001693 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 1.0e-06 57.4 115 36.5
TWI73G0112 Tripterygium wilfordii HOM05D018753 ORTHO05D007789 1.8e-06 56.6 127 33.9
Lj1A798T45 Lonicera japonica HOM05D011954 ORTHO05D014236 3.0e-06 55.8 126 31.7
Rhsim04G0228800 Rhododendron simsii HOM05D009663 ORTHO05D011812 4.0e-06 55.5 100 37.0
Lj1A773T40 Lonicera japonica HOM05D011954 ORTHO05D014236 5.2e-06 55.1 117 30.8
Lj1A777T20 Lonicera japonica HOM05D011954 ORTHO05D014236 5.2e-06 55.1 117 29.9
Rhsim08G0120900 Rhododendron simsii HOM05D010787 ORTHO05D011812 6.8e-06 54.7 47 55.3
CSS0008827 Camellia sinensis var. sinensis HOM05D008623 ORTHO05D007789 8.9e-06 54.3 108 34.3
Dinv41634 Davidia involucrata HOM05D008623 ORTHO05D007789 8.9e-06 54.3 102 41.2


User provided reference genes

Program Settings