Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G037100 Carya illinoinensis HOM05D022937 ORTHO05D013287 7.4e-49 196.8 95 100.0
CiPaw.09G043500 Carya illinoinensis HOM05D022937 ORTHO05D013287 1.6e-14 82.8 72 59.7
QL07p004374 Quercus lobata HOM05D022937 ORTHO05D013287 4.0e-10 68.2 69 58.0
Thecc.05G143700 Theobroma cacao HOM05D023923 ORTHO05D013287 1.5e-09 66.2 50 62.0
Dinv18475 Davidia involucrata HOM05D014689 ORTHO05D013287 3.4e-09 65.1 60 55.0
Cpa.g.sc5.186 Carica papaya HOM05D014689 ORTHO05D013287 6.3e-08 60.8 81 42.0
Cfa016739 Carpinus fangiana HOM05D022937 ORTHO05D013287 1.1e-07 60.1 65 52.3
Haze_19764 Corylus avellana HOM05D022937 ORTHO05D013287 1.4e-07 59.7 65 52.3
Gohir.A01G193600 Gossypium hirsutum HOM05D023923 ORTHO05D013287 1.4e-07 59.7 53 56.6
Gohir.D01G183880 Gossypium hirsutum HOM05D023923 ORTHO05D013287 1.8e-07 59.3 109 38.5
Gohir.A07G045700 Gossypium hirsutum HOM05D016786 ORTHO05D019061 4.1e-07 58.2 48 60.4
COL.COLO4_21289 Corchorus olitorius HOM05D016786 ORTHO05D019061 5.4e-07 57.8 109 39.4
Gohir.D07G050100 Gossypium hirsutum HOM05D016786 ORTHO05D019061 5.4e-07 57.8 48 60.4
QL07p004389 Quercus lobata HOM05D014870 ORTHO05D016915 5.4e-07 57.8 55 52.7
Gorai.002G227300 Gossypium raimondii HOM05D023923 ORTHO05D013287 9.2e-07 57.0 109 37.6
Gorai.001G053200 Gossypium raimondii HOM05D016786 ORTHO05D019061 1.2e-06 56.6 48 60.4
Manes.08G055400 Manihot esculenta HOM05D014689 ORTHO05D013287 1.6e-06 56.2 51 54.9
Manes.08G055600 Manihot esculenta HOM05D014689 ORTHO05D013287 1.6e-06 56.2 51 54.9
Manes.08G055300 Manihot esculenta HOM05D014689 ORTHO05D013287 3.5e-06 55.1 51 54.9
QL07p004393 Quercus lobata HOM05D014870 ORTHO05D016915 4.5e-06 54.7 37 70.3
Gorai.007G355400 Gossypium raimondii HOM05D016786 ORTHO05D019061 5.9e-06 54.3 71 47.9
Potri.006G044300 Populus trichocarpa HOM05D014689 ORTHO05D013287 5.9e-06 54.3 54 50.0


User provided reference genes

Program Settings