Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.8e-76 288.5 142 100.0
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.0e-46 190.3 132 75.0
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 4.4e-45 184.9 131 72.5
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 1.1e-40 170.2 142 63.4
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.8e-38 162.9 140 62.9
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 3.0e-38 162.2 142 63.4
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 2.0e-37 159.5 142 60.6
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 3.3e-37 158.7 141 63.8
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 5.7e-37 157.9 146 61.6
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.2e-36 156.0 143 61.5
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 1.1e-35 153.7 144 61.1
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.4e-35 153.3 144 61.1
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 2.4e-35 152.5 141 58.2
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 5.3e-35 151.4 130 60.8
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 5.3e-35 151.4 143 60.1
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 3.5e-34 148.7 145 58.6
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 7.7e-34 147.5 126 64.3
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.3e-33 146.7 138 60.9
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.3e-33 146.7 138 60.9
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.7e-33 146.4 113 67.3
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 2.2e-33 146.0 142 57.7
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.0e-33 144.8 138 62.3
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 6.5e-33 144.4 141 56.0
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 6.5e-33 144.4 133 59.4
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 8.5e-33 144.1 141 56.0
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 8.5e-33 144.1 141 56.0
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 3.2e-32 142.1 146 58.9
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 7.2e-32 141.0 146 56.2
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 9.4e-32 140.6 143 56.6
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.2e-31 140.2 138 58.0
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.2e-31 140.2 136 52.9
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 1.6e-31 139.8 139 54.7
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.6e-31 139.8 109 69.7
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.1e-31 139.4 103 69.9
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 6.1e-31 137.9 141 55.3
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.1e-31 137.9 138 57.2
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 6.1e-31 137.9 133 57.1
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 6.1e-31 137.9 138 58.7
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 8.0e-31 137.5 103 68.9
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.0e-30 137.1 139 55.4
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 1.0e-30 137.1 135 57.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 3.0e-30 135.6 139 52.5
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 4.0e-30 135.2 135 54.8
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 4.0e-30 135.2 115 62.6
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 8.8e-30 134.0 85 77.6
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 1.2e-29 133.7 142 53.5
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.5e-29 133.3 93 69.9
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 2.0e-29 132.9 142 54.2
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 2.6e-29 132.5 149 49.0
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 3.3e-29 132.1 139 54.7
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 2.2e-28 129.4 131 53.4
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 5.3e-27 124.8 140 52.1
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 7.0e-27 124.4 95 69.5
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 9.1e-27 124.0 86 68.6
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 1.2e-26 123.6 111 62.2
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.0e-26 122.9 111 59.5
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 2.2e-25 119.4 128 50.8
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.8e-25 118.6 70 78.6
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.1e-24 117.1 137 46.7
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 1.1e-24 117.1 128 51.6
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 4.2e-24 115.2 137 48.9
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 4.2e-24 115.2 140 48.6
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 9.4e-24 114.0 69 79.7
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 1.2e-23 113.6 62 83.9
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 2.7e-23 112.5 91 62.6
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 6.1e-23 111.3 134 49.3
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 6.1e-23 111.3 99 56.6
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 6.1e-23 111.3 106 55.7
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 1.0e-22 110.5 65 81.5
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 1.4e-22 110.2 107 57.0
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 4.0e-22 108.6 104 56.7
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 5.2e-22 108.2 70 74.3
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 5.2e-22 108.2 83 63.9
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 6.8e-22 107.8 90 62.2
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 6.8e-22 107.8 104 55.8
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 6.8e-22 107.8 104 55.8
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.2e-21 107.1 83 63.9
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 1.2e-21 107.1 62 82.3
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.5e-21 106.7 131 49.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 2.0e-21 106.3 104 55.8
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 2.0e-21 106.3 104 53.8
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.4e-21 105.5 124 49.2
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 4.4e-21 105.1 75 69.3
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 4.4e-21 105.1 123 49.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 5.7e-21 104.8 63 79.4
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.3e-20 103.6 79 64.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 1.7e-20 103.2 67 74.6
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.7e-20 103.2 88 60.2
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 2.2e-20 102.8 65 75.4
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 2.2e-20 102.8 76 68.4
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.8e-20 102.4 67 71.6
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.8e-20 102.4 67 71.6
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 2.8e-20 102.4 67 71.6
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 3.7e-20 102.1 67 73.1
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 6.3e-20 101.3 116 49.1
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.4e-19 100.1 80 60.0
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 1.6e-18 96.7 79 63.3
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.3e-17 92.8 81 60.5
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.3e-17 92.8 81 60.5
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 2.3e-17 92.8 66 66.7
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 8.6e-17 90.9 82 59.8
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.9e-16 89.7 117 43.6
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 1.2e-15 87.0 63 63.5
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 8.0e-15 84.3 65 66.2
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 8.0e-15 84.3 99 43.4
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 6.8e-14 81.3 72 61.1
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 7.5e-13 77.8 62 59.7
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.3e-09 67.0 86 45.3
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 1.3e-09 67.0 86 45.3


User provided reference genes

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