Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G028000 Carya illinoinensis HOM05D004743 ORTHO05D005698 7.0e-84 313.9 159 100.0
Haze_19962 Corylus avellana HOM05D004743 ORTHO05D005698 8.2e-77 290.4 159 89.3
RcHm_v2.0_Chr3g0480261 Rosa chinensis HOM05D004743 ORTHO05D005698 2.4e-76 288.9 158 89.2
FvH4_6g22680 Fragaria vesca HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
FAN02G0944 Fragaria x ananassa HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
FAN05G2002 Fragaria x ananassa HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
FAN09G0554 Fragaria x ananassa HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
FAN14G2026 Fragaria x ananassa HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
FAN14G4474 Fragaria x ananassa HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
Prupe.7G073800 Prunus persica HOM05D004743 ORTHO05D005698 4.5e-75 284.6 158 86.1
MD14G1060700 Malus domestica HOM05D004743 ORTHO05D005698 2.2e-74 282.3 158 85.4
MD12G1061000 Malus domestica HOM05D004743 ORTHO05D005698 3.8e-74 281.6 158 84.8
CANSAT64G2667 Cannabis sativa HOM05D004743 ORTHO05D005698 5.0e-74 281.2 158 86.1
CSS0027207 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 4.2e-73 278.1 158 85.4
CSS0048559 Camellia sinensis var. sinensis HOM05D004743 ORTHO05D005698 4.2e-73 278.1 158 85.4
Ciclev10012973m.g Citrus clementina HOM05D004743 ORTHO05D005698 9.4e-73 276.9 158 84.8
Sc13g0002130 Simmondsia chinensis HOM05D004743 ORTHO05D005698 4.7e-72 274.6 155 85.8
Sed0004669 Sechium edule HOM05D004743 ORTHO05D005698 1.0e-71 273.5 159 82.4
Manes.08G045000 Manihot esculenta HOM05D004743 ORTHO05D005698 1.8e-71 272.7 158 82.9
Cpa.g.sc85.89 Carica papaya HOM05D004743 ORTHO05D005698 2.3e-71 272.3 158 83.5
Hma1.2p1_0005F.1_g004310 Hydrangea macrophylla HOM05D004743 ORTHO05D005698 2.3e-71 272.3 158 83.5
Hund19191 Selenicereus undatus HOM05D004743 ORTHO05D005698 3.0e-71 271.9 154 84.4
PGR142G2650 Punica granatum HOM05D004743 ORTHO05D005698 4.0e-71 271.6 159 81.1
EL10Ac3g06947 Beta vulgaris HOM05D004743 ORTHO05D005698 5.2e-71 271.2 154 83.8
Gorai.006G141500 Gossypium raimondii HOM05D004743 ORTHO05D005698 8.8e-71 270.4 154 84.4
Manes.09G032100 Manihot esculenta HOM05D004743 ORTHO05D005698 8.8e-71 270.4 158 81.6
Potri.006G059300 Populus trichocarpa HOM05D004743 ORTHO05D005698 1.2e-70 270.0 158 80.4
Sed0015240 Sechium edule HOM05D004743 ORTHO05D005698 1.2e-70 270.0 159 79.9
Thecc.05G168500 Theobroma cacao HOM05D004743 ORTHO05D005698 1.2e-70 270.0 158 81.6
Gohir.A01G192000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 2.6e-70 268.9 154 83.1
Dinv14277 Davidia involucrata HOM05D004743 ORTHO05D005698 3.4e-70 268.5 158 80.4
Gohir.A09G126700 Gossypium hirsutum HOM05D004743 ORTHO05D005698 3.4e-70 268.5 154 83.8
Gohir.D01G178000 Gossypium hirsutum HOM05D004743 ORTHO05D005698 3.4e-70 268.5 153 83.7
Gorai.002G225100 Gossypium raimondii HOM05D004743 ORTHO05D005698 3.4e-70 268.5 153 83.7
Rhsim03G0009100 Rhododendron simsii HOM05D004743 ORTHO05D005698 3.4e-70 268.5 157 83.4
Cc00_g14600 Coffea canephora HOM05D004743 ORTHO05D005698 4.4e-70 268.1 159 81.8
Lju124A30G9 Lonicera japonica HOM05D004743 ORTHO05D005698 4.4e-70 268.1 159 83.0
Cc06_g22060 Coffea canephora HOM05D004743 ORTHO05D005698 9.8e-70 266.9 159 81.1
COL.COLO4_36134 Corchorus olitorius HOM05D004743 ORTHO05D005698 9.8e-70 266.9 158 81.6
CDE07G0719 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 1.3e-69 266.5 154 83.8
THA.LOC104824464 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.7e-69 266.2 158 81.0
Duzib106G0699 Durio zibethinus HOM05D004743 ORTHO05D005698 2.2e-69 265.8 154 82.5
Gohir.D09G123248 Gossypium hirsutum HOM05D004743 ORTHO05D005698 2.2e-69 265.8 154 83.1
vmacro07935 Vaccinium macrocarpon HOM05D004743 ORTHO05D005698 2.2e-69 265.8 157 82.2
MELO3C009644.2 Cucumis melo HOM05D004743 ORTHO05D005698 4.8e-69 264.6 159 79.9
AUR62024326 Chenopodium quinoa HOM05D004743 ORTHO05D005698 1.1e-68 263.5 154 81.2
Thhalv10017352m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 2.4e-68 262.3 158 79.7
Ah.13g076070 Amaranthus hybridus HOM05D004743 ORTHO05D005698 4.1e-68 261.5 154 83.8
AUR62012065 Chenopodium quinoa HOM05D004743 ORTHO05D005698 9.1e-68 260.4 154 80.5
Actinidia09383 Actinidia chinensis HOM05D000570 ORTHO05D005344 1.2e-67 260.0 158 78.5
CsaV3_3G039010 Cucumis sativus L. HOM05D004743 ORTHO05D005698 1.2e-67 260.0 159 78.0
TAR623G0239 Trochodendron aralioides HOM05D004743 ORTHO05D005698 1.2e-67 260.0 157 80.3
Phvul.001G140800 Phaseolus vulgaris HOM05D004743 ORTHO05D005698 2.0e-67 259.2 158 80.4
Oeu033746.1 Olea europaea HOM05D004743 ORTHO05D005698 2.7e-67 258.8 158 79.1
CARHR137250 Cardamine hirsuta HOM05D004743 ORTHO05D005698 1.0e-66 256.9 158 77.8
VMungo1383G0120 Vigna mungo HOM05D004743 ORTHO05D005698 1.0e-66 256.9 158 79.1
Aa31LG1G24060 Aethionema arabicum HOM05D004743 ORTHO05D005698 2.2e-66 255.8 158 77.2
AT2G42210 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 2.2e-66 255.8 158 77.8
Sp4g24390 Schrenkiella parvula HOM05D004743 ORTHO05D005698 3.8e-66 255.0 158 76.6
TAR633G2476 Trochodendron aralioides HOM05D004743 ORTHO05D005698 3.8e-66 255.0 156 78.2
HanXRQChr10g0295691 Helianthus annuus HOM05D004743 ORTHO05D005698 5.0e-66 254.6 154 79.9
DCAR_013558 Daucus carota HOM05D004743 ORTHO05D005698 6.5e-66 254.2 154 81.2
Thhalv10006285m.g Eutrema salsugineum HOM05D004743 ORTHO05D005698 6.5e-66 254.2 158 76.6
HanXRQChr15g0491311 Helianthus annuus HOM05D004743 ORTHO05D005698 6.5e-66 254.2 154 79.2
Sp5g04820 Schrenkiella parvula HOM05D004743 ORTHO05D005698 6.5e-66 254.2 158 76.6
AL4G40570 Arabidopsis lyrata HOM05D004743 ORTHO05D005698 1.5e-65 253.1 158 76.6
MBI04_g27127_MAGBIO Magnolia biondii HOM05D004743 ORTHO05D005698 1.9e-65 252.7 154 80.5
Nitab4.5_0001538g0070 Nicotiana tabacum HOM05D004743 ORTHO05D005698 1.9e-65 252.7 158 79.7
TAR633G1605 Trochodendron aralioides HOM05D004743 ORTHO05D005698 3.2e-65 251.9 156 78.2
BcaB06g29229 Brassica carinata HOM05D004743 ORTHO05D005698 4.2e-65 251.5 155 78.1
BraA05t19270Z Brassica rapa HOM05D004743 ORTHO05D005698 4.2e-65 251.5 159 77.4
Duzib128G1008 Durio zibethinus HOM05D004743 ORTHO05D005698 4.2e-65 251.5 154 79.9
Nitab4.5_0000991g0030 Nicotiana tabacum HOM05D004743 ORTHO05D005698 9.4e-65 250.4 158 78.5
BcaC02g12469 Brassica carinata HOM05D004743 ORTHO05D005698 1.2e-64 250.0 150 80.0
BcaNung04402 Brassica carinata HOM05D004743 ORTHO05D005698 1.2e-64 250.0 150 80.0
A05p02780 Brassica napus HOM05D004743 ORTHO05D005698 1.2e-64 250.0 150 80.0
C04p03370 Brassica napus HOM05D004743 ORTHO05D005698 1.2e-64 250.0 150 80.0
Glyma.03G142900 Glycine max HOM05D004743 ORTHO05D005698 1.2e-64 250.0 158 77.2
A04p32050 Brassica napus HOM05D004743 ORTHO05D005698 1.6e-64 249.6 155 77.4
CAN.G1161.21 Capsicum annuum HOM05D004743 ORTHO05D005698 1.6e-64 249.6 156 78.2
Glyma.19G145900 Glycine max HOM05D004743 ORTHO05D005698 1.6e-64 249.6 158 77.2
MSTRG.19893 Avicennia marina HOM05D004743 ORTHO05D005698 2.1e-64 249.2 159 77.4
BcaC02g07257 Brassica carinata HOM05D004743 ORTHO05D005698 2.1e-64 249.2 155 77.4
C04p69570 Brassica napus HOM05D004743 ORTHO05D005698 2.1e-64 249.2 155 77.4
BolC4t28455H Brassica oleracea HOM05D004743 ORTHO05D005698 2.1e-64 249.2 155 77.4
ECA247G0571 Erigeron canadensis HOM05D004743 ORTHO05D005698 2.1e-64 249.2 159 76.7
Carub.0004s2455 Capsella rubella HOM05D004743 ORTHO05D005698 2.7e-64 248.8 158 75.3
BraA04t18662Z Brassica rapa HOM05D004743 ORTHO05D005698 3.6e-64 248.4 155 76.8
Ca_08506_v3 Cicer arietinum L. HOM05D004743 ORTHO05D005698 3.6e-64 248.4 154 79.9
SGA_v2.0_scaffold69G23079 Striga asiatica HOM05D004743 ORTHO05D005698 3.6e-64 248.4 159 74.8
Aa31LG10G12610 Aethionema arabicum HOM05D004743 ORTHO05D005698 4.7e-64 248.1 158 75.3
Sopen10g029310 Solanum pennellii HOM05D004743 ORTHO05D005698 6.1e-64 247.7 158 76.6
PGSC0003DMG400011432 Solanum tuberosum HOM05D004743 ORTHO05D005698 6.1e-64 247.7 158 76.6
CDE04G2796 Ceratophyllum demersum HOM05D004743 ORTHO05D005698 1.0e-63 246.9 138 87.7
Lsat_1_v5_gn_9_28001 Lactuca sativa HOM05D004743 ORTHO05D005698 1.0e-63 246.9 159 75.5
PSO339G6088 Papaver somniferum HOM05D004743 ORTHO05D005698 3.0e-63 245.4 154 77.3
PSO384G3106 Papaver somniferum HOM05D004743 ORTHO05D005698 3.0e-63 245.4 154 77.3
Peaxi162Scf00003g04210 Petunia axillaris HOM05D004743 ORTHO05D005698 5.2e-63 244.6 158 74.1
Lalb_Chr04g0259631 Lupinus albus HOM05D004743 ORTHO05D005698 8.8e-63 243.8 158 74.7
Psat3g069720 Pisum sativum HOM05D004743 ORTHO05D005698 8.8e-63 243.8 158 75.9
Solyc10g078690.3 Solanum lycopersicum HOM05D004743 ORTHO05D005698 1.2e-62 243.4 158 75.3
Aqoxy2G00062 Aquilegia oxysepala HOM05D004743 ORTHO05D005698 3.4e-62 241.9 154 74.7
Cfa016899 Carpinus fangiana HOM05D006381 ORTHO05D008523 3.4e-62 241.9 135 87.4
arahy.Tifrunner.gnm1.ann1.2GY28N Arachis hypogaea HOM05D000570 ORTHO05D005344 4.4e-62 241.5 158 77.2
arahy.Tifrunner.gnm1.ann1.CB7VX4 Arachis hypogaea HOM05D004743 ORTHO05D005344 4.4e-62 241.5 158 77.2
ATR0605G135 Amborella trichopoda HOM05D004743 ORTHO05D005698 5.7e-62 241.1 159 71.1
GSVIVG01033524001 Vitis vinifera HOM05D004743 ORTHO05D005698 5.7e-62 241.1 159 71.1
Sabra06G0042700 Salix brachista HOM05D004743 ORTHO05D005698 1.7e-61 239.6 207 60.4
ClCG10G017380 Citrullus lanatus HOM05D004743 ORTHO05D005698 1.8e-60 236.1 249 53.0
Lj1g0027895 Lotus japonicus HOM05D004743 ORTHO05D005344 1.8e-60 236.1 152 76.3
Migut.J01816 Erythranthe guttata HOM05D004743 ORTHO05D005698 4.1e-60 235.0 159 69.2
THA.LOC104802456 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.6e-59 233.0 143 78.3
unitig_749.g14140 Utricularia gibba HOM05D004743 ORTHO05D005698 7.7e-59 230.7 154 72.7
HPP92_001833 Vanilla planifolia HOM05D004743 ORTHO05D005698 1.5e-57 226.5 154 72.1
Lalb_Chr18g0047741 Lupinus albus HOM05D004743 ORTHO05D005698 7.2e-57 224.2 142 76.8
Zm00001eb252780 Zea mays HOM05D004743 ORTHO05D005698 5.2e-55 218.0 144 72.2
Nn7g36049 Nelumbo nucifera HOM05D004743 ORTHO05D005698 1.2e-54 216.9 123 85.4
TWI77G0677 Tripterygium wilfordii HOM05D004743 ORTHO05D005698 1.3e-53 213.4 159 66.7
Os02g0717300 Oryza sativa ssp. japonica HOM05D004743 ORTHO05D005698 2.2e-53 212.6 144 69.4
Atru.chr8.1050 Acer truncatum HOM05D004743 ORTHO05D005698 1.1e-52 210.3 125 80.0
TWI53G0547 Tripterygium wilfordii HOM05D004743 ORTHO05D005698 2.0e-51 206.1 160 63.8
unitig_26.g9039 Utricularia gibba HOM05D004743 ORTHO05D005698 2.3e-50 202.6 207 53.1
Oeu008114.1 Olea europaea HOM05D004743 ORTHO05D005698 4.3e-49 198.4 302 42.7
TPR.G13232 Trifolium pratense HOM05D004743 ORTHO05D005698 5.6e-49 198.0 118 80.5
SEGI_22128 Sequoiadendron giganteum HOM05D004743 ORTHO05D005698 1.0e-47 193.7 154 61.0
QL07p023149 Quercus lobata HOM05D004743 ORTHO05D005698 2.6e-46 189.1 109 81.7
SalBow6G0397 Salvia bowleyana HOM05D004743 ORTHO05D005698 2.6e-46 189.1 187 54.0
Hund19190 Selenicereus undatus HOM05D004743 ORTHO05D005698 3.6e-40 168.7 138 63.0
CiPaw.09G032100 Carya illinoinensis HOM05D004743 ORTHO05D005698 1.1e-39 167.2 99 85.9
Eucgr.A02439 Eucalyptus grandis HOM05D004743 ORTHO05D005698 9.8e-38 160.6 111 73.0
C04p16200 Brassica napus HOM05D004743 ORTHO05D005698 1.7e-34 149.8 133 57.9
BolC4t21974H Brassica oleracea HOM05D004743 ORTHO05D005698 5.1e-34 148.3 90 77.8
Mapoly0011s0060 Marchantia polymorpha HOM05D004743 ORTHO05D005698 1.2e-32 143.7 154 46.8
Pp3c5_22310 Physcomitrium patens HOM05D004743 ORTHO05D005698 1.5e-30 136.7 149 48.3
Pp3c6_9862 Physcomitrium patens HOM05D004743 ORTHO05D005698 3.4e-30 135.6 149 47.7
BcaC03g17937 Brassica carinata HOM05D004743 ORTHO05D005698 1.4e-28 130.2 146 54.1
CBR_g32607 Chara braunii HOM05D004743 ORTHO05D005698 3.2e-28 129.0 157 42.7
C04p16220 Brassica napus HOM05D004743 ORTHO05D005698 1.2e-27 127.1 77 77.9
THA.LOC104824466 Tarenaya hassleriana HOM05D004743 ORTHO05D005698 1.2e-27 127.1 123 53.7
AagrBONN_evm.TU.Sc2ySwM_362.1495 Anthoceros agrestis HOM05D004743 ORTHO05D005698 4.3e-25 118.6 145 43.4
Os09g0279300 Oryza sativa ssp. japonica HOM05D004743 ORTHO05D005698 1.6e-24 116.7 132 43.2
C09p44920 Brassica napus HOM05D004743 ORTHO05D005698 2.4e-23 112.8 76 72.4
arahy.Tifrunner.gnm1.ann1.MK9Y65 Arachis hypogaea HOM05D004743 ORTHO05D005698 1.5e-22 110.2 109 56.0
arahy.Tifrunner.gnm1.ann1.W4Y9B5 Arachis hypogaea HOM05D004743 ORTHO05D005698 1.5e-22 110.2 109 56.0
Zm00001eb308440 Zea mays HOM05D004743 ORTHO05D005698 1.5e-22 110.2 133 42.1
arahy.Tifrunner.gnm1.ann1.GN7FJD Arachis hypogaea HOM05D004743 ORTHO05D005698 5.8e-22 108.2 78 67.9
arahy.Tifrunner.gnm1.ann1.YRY7W4 Arachis hypogaea HOM05D004743 ORTHO05D005698 9.9e-22 107.5 95 58.9
arahy.Tifrunner.gnm1.ann1.HF75RM Arachis hypogaea HOM05D004743 ORTHO05D005698 1.1e-20 104.0 77 67.5
BcaC04g22765 Brassica carinata HOM05D004743 ORTHO05D005698 5.4e-20 101.7 78 67.9
arahy.Tifrunner.gnm1.ann1.L5I9G2 Arachis hypogaea HOM05D004743 ORTHO05D005698 1.6e-19 100.1 77 64.9
C02p59940 Brassica napus HOM05D004743 ORTHO05D005698 2.1e-19 99.8 101 56.4
PSO063G6118 Papaver somniferum HOM05D004743 ORTHO05D005698 3.5e-11 72.4 146 37.7
arahy.Tifrunner.gnm1.ann1.1ZE97X Arachis hypogaea HOM05D004743 ORTHO05D005698 1.5e-09 67.0 69 55.1
arahy.Tifrunner.gnm1.ann1.JW2HXV Arachis hypogaea HOM05D004743 ORTHO05D005698 4.3e-09 65.5 69 53.6
TPR.G284 Trifolium pratense HOM05D004743 ORTHO05D005698 2.4e-07 59.7 47 66.0
AT3G57900 Arabidopsis thaliana HOM05D004743 ORTHO05D005698 1.2e-06 57.4 96 37.5


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