Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 4.3e-116 421.4 221 100.0
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 4.6e-94 348.2 192 94.3
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 4.5e-89 331.6 192 89.1
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.2e-88 329.3 193 89.6
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 3.8e-88 328.6 193 89.6
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 3.8e-88 328.6 193 89.6
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 8.4e-88 327.4 193 89.1
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 4.2e-87 325.1 193 88.6
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 4.2e-87 325.1 192 88.5
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 2.7e-86 322.4 193 88.6
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 6.1e-86 321.2 192 86.5
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 1.3e-85 320.1 192 87.0
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 2.3e-85 319.3 194 86.6
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 5.1e-85 318.2 194 88.1
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 7.4e-84 314.3 192 86.5
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 9.7e-84 313.9 203 84.7
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 1.3e-83 313.5 195 86.2
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 3.7e-83 312.0 192 85.4
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 4.8e-83 311.6 195 86.7
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 4.8e-83 311.6 192 85.4
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 4.8e-83 311.6 192 85.4
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 8.2e-83 310.8 192 85.9
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 1.1e-82 310.5 192 85.4
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 1.1e-82 310.5 192 85.4
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 1.4e-82 310.1 192 84.9
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 1.8e-82 309.7 192 85.4
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 2.4e-82 309.3 193 85.0
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 3.1e-82 308.9 195 85.6
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 3.1e-82 308.9 195 85.6
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 4.1e-82 308.5 195 86.2
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 6.9e-82 307.8 193 84.5
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 1.2e-81 307.0 193 85.5
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 1.2e-81 307.0 193 85.5
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.2e-81 307.0 195 85.1
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 2.0e-81 306.2 192 83.9
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 2.6e-81 305.8 190 88.4
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 3.4e-81 305.4 193 85.0
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 4.5e-81 305.1 194 84.0
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 4.5e-81 305.1 194 84.5
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 7.7e-81 304.3 193 86.0
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 1.3e-80 303.5 195 86.2
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 1.7e-80 303.1 195 83.6
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 2.2e-80 302.8 193 85.5
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 2.9e-80 302.4 190 86.3
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 3.8e-80 302.0 195 84.6
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 3.8e-80 302.0 195 83.6
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 5.0e-80 301.6 194 84.5
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 6.5e-80 301.2 193 85.5
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 8.5e-80 300.8 194 84.5
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.1e-79 300.4 194 84.0
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 1.4e-79 300.1 195 84.1
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 1.9e-79 299.7 194 84.5
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 1.9e-79 299.7 191 85.3
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 1.9e-79 299.7 193 85.0
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.5e-79 299.3 191 85.3
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.5e-79 299.3 195 84.1
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 5.5e-79 298.1 194 84.0
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 5.5e-79 298.1 190 84.2
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 7.2e-79 297.7 191 84.8
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 7.2e-79 297.7 190 85.3
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 7.2e-79 297.7 191 84.8
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 9.4e-79 297.4 193 82.9
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 1.2e-78 297.0 193 82.9
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 1.2e-78 297.0 180 86.1
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 1.6e-78 296.6 191 83.8
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.7e-78 295.8 189 84.1
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 3.6e-78 295.4 191 84.3
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 4.6e-78 295.0 190 84.2
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 6.1e-78 294.7 195 81.5
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 6.1e-78 294.7 195 81.5
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 6.1e-78 294.7 195 81.5
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 1.0e-77 293.9 190 81.6
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 8.8e-77 290.8 193 81.3
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 8.8e-77 290.8 193 80.8
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.5e-76 290.0 193 81.3
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 5.7e-76 288.1 192 79.2
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 6.3e-75 284.6 202 77.2
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 6.3e-75 284.6 193 79.3
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 8.2e-75 284.3 187 80.2
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 1.8e-74 283.1 188 79.8
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 2.4e-74 282.7 198 77.8
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 4.1e-74 282.0 193 79.3
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 1.2e-73 280.4 189 79.4
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.2e-73 280.4 189 78.3
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.2e-73 280.4 193 81.3
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.6e-73 279.3 188 78.2
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 4.5e-73 278.5 193 77.7
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 5.9e-73 278.1 195 76.9
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.0e-72 277.3 193 80.3
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.3e-72 276.9 188 78.2
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 3.8e-72 275.4 195 75.4
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 7.9e-70 267.7 189 74.6
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 1.8e-69 266.5 197 72.1
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 3.9e-69 265.4 195 74.9
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 7.4e-68 261.2 196 75.0
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 4.8e-67 258.5 186 75.3
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 6.3e-67 258.1 181 76.2
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 2.4e-66 256.1 181 76.2
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 4.1e-66 255.4 174 79.3
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.0e-64 250.8 183 72.1
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 4.2e-63 245.4 190 68.9
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 4.2e-63 245.4 184 71.7
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 3.6e-62 242.3 187 71.7
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 3.6e-62 242.3 195 67.7
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 6.1e-62 241.5 197 66.0
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 5.2e-61 238.4 205 64.4
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 6.7e-61 238.0 184 69.0
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 9.1e-58 227.6 136 90.4
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 1.0e-56 224.2 183 61.7
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 1.6e-54 216.9 136 87.5
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 2.1e-54 216.5 195 68.2
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 1.5e-52 210.3 135 81.5
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.8e-51 206.1 191 64.4
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 3.2e-47 192.6 167 64.7
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.0e-45 187.6 189 60.8
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 1.8e-42 176.8 132 73.5
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 5.4e-42 175.3 192 55.7
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 1.2e-41 174.1 115 81.7
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.7e-41 172.9 126 78.6
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 3.6e-38 162.5 101 80.2
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 9.2e-34 147.9 164 45.7
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 1.3e-32 144.1 135 63.7
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 3.1e-29 132.9 106 69.8
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 5.2e-29 132.1 96 71.9
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 2.0e-28 130.2 106 67.9
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 4.0e-21 105.9 82 70.7
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 2.6e-20 103.2 73 80.8
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 1.2e-17 94.4 170 33.5
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 3.0e-16 89.7 77 67.5
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 3.0e-16 89.7 46 87.0
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 8.9e-13 78.2 164 29.9
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 3.5e-09 66.2 39 79.5
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 2.1e-06 57.0 54 66.7
SGA_v2.0_scaffold472G52090 Striga asiatica HOM05D005910 ORTHO05D007088 3.6e-06 56.2 54 66.7


User provided reference genes

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