Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 2.3e-125 452.2 221 100.0
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 4.5e-97 358.2 219 78.5
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 2.2e-96 355.9 219 77.6
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 1.8e-90 336.3 221 73.8
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 5.3e-90 334.7 220 72.7
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 7.6e-89 330.9 220 72.7
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 8.4e-88 327.4 219 73.5
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 8.4e-88 327.4 223 74.9
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 4.2e-87 325.1 223 70.9
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 9.3e-87 323.9 223 72.6
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 1.2e-86 323.6 217 71.0
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 1.0e-85 320.5 221 69.7
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 1.8e-85 319.7 222 70.3
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 1.1e-84 317.0 219 72.6
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 1.5e-84 316.6 220 71.4
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 3.3e-84 315.5 222 69.8
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 3.3e-84 315.5 224 69.6
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 5.7e-84 314.7 223 71.7
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 5.7e-84 314.7 219 71.2
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 7.4e-84 314.3 220 70.9
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 9.7e-84 313.9 221 68.3
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 1.3e-83 313.5 221 69.2
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 2.2e-83 312.8 220 70.0
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.1e-82 310.5 216 69.0
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 1.4e-82 310.1 223 68.2
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 1.8e-82 309.7 218 68.8
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 1.8e-82 309.7 218 68.8
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 2.4e-82 309.3 219 70.8
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 3.1e-82 308.9 219 69.9
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 3.1e-82 308.9 218 68.8
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 4.1e-82 308.5 219 69.9
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 4.1e-82 308.5 216 68.5
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 5.3e-82 308.1 216 68.5
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 5.3e-82 308.1 218 67.4
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 5.3e-82 308.1 218 68.8
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 9.0e-82 307.4 219 69.9
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 1.2e-81 307.0 218 68.3
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 2.0e-81 306.2 215 69.8
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 2.6e-81 305.8 219 68.0
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 2.6e-81 305.8 216 67.1
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 2.6e-81 305.8 216 67.1
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 3.4e-81 305.4 219 68.9
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 3.4e-81 305.4 216 67.6
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 3.4e-81 305.4 219 69.4
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 4.5e-81 305.1 215 68.8
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 1.0e-80 303.9 221 66.5
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 1.3e-80 303.5 217 69.1
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 1.7e-80 303.1 224 67.9
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 1.7e-80 303.1 215 68.8
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 2.2e-80 302.8 219 67.6
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 2.2e-80 302.8 220 67.7
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 3.8e-80 302.0 220 67.7
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 5.0e-80 301.6 219 68.0
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 1.4e-79 300.1 221 66.1
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 7.2e-79 297.7 223 66.8
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 7.2e-79 297.7 220 66.4
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.6e-78 296.6 230 63.9
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 2.7e-78 295.8 227 65.2
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 4.6e-78 295.0 220 65.0
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 1.0e-77 293.9 214 68.2
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 1.4e-77 293.5 218 66.5
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 1.4e-77 293.5 222 67.1
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 1.8e-77 293.1 217 65.9
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 6.7e-77 291.2 218 66.1
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 4.3e-76 288.5 220 63.6
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 2.2e-75 286.2 222 63.1
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 3.7e-75 285.4 217 63.1
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 4.8e-75 285.0 217 63.6
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 1.8e-74 283.1 225 62.7
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 2.4e-74 282.7 222 64.0
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 2.6e-73 279.3 218 63.8
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 1.7e-72 276.6 222 61.3
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 2.9e-72 275.8 222 61.7
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 5.0e-72 275.0 222 60.4
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 5.0e-72 275.0 215 63.7
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 6.5e-72 274.6 222 60.4
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 8.5e-72 274.2 210 63.8
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 8.5e-72 274.2 222 62.2
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 1.1e-71 273.9 223 61.9
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 4.2e-71 271.9 220 66.4
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 1.2e-70 270.4 210 63.3
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 2.7e-70 269.2 213 61.5
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 3.9e-69 265.4 229 59.4
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 8.8e-69 264.2 220 64.1
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 1.1e-68 263.8 217 61.3
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 2.6e-68 262.7 225 60.0
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 2.6e-68 262.7 217 60.8
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 5.7e-68 261.5 217 60.4
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.1e-66 255.8 242 57.4
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 4.1e-66 255.4 244 54.9
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 1.2e-65 253.8 217 60.4
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.7e-64 250.0 220 58.2
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 4.1e-58 228.8 203 60.6
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 5.0e-56 221.9 227 49.8
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 3.2e-55 219.2 228 51.8
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 7.2e-55 218.0 129 79.1
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 7.5e-52 208.0 129 71.3
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 9.8e-52 207.6 126 75.4
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 1.7e-51 206.8 126 74.6
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 3.7e-51 205.7 175 62.9
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.9e-48 196.1 143 67.1
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 8.5e-48 194.5 142 66.9
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 8.0e-46 188.0 176 57.4
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 1.0e-45 187.6 177 54.8
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 1.8e-45 186.8 255 39.6
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 3.0e-45 186.0 143 68.5
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 1.5e-44 183.7 189 54.5
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 2.8e-43 179.5 146 65.1
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 3.8e-40 169.1 104 73.1
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 2.3e-37 159.8 136 58.1
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 4.0e-37 159.1 113 69.0
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 1.5e-36 157.1 142 55.6
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 1.7e-32 143.7 142 53.5
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 7.3e-31 138.3 144 49.3
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 9.5e-31 137.9 117 59.0
Gorai.011G111300 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.0e-29 134.4 77 77.9
Gorai.013G089700 Gossypium raimondii HOM05D005267 ORTHO05D006303 3.1e-29 132.9 134 54.5
Gorai.001G205400 Gossypium raimondii HOM05D005267 ORTHO05D006303 6.8e-29 131.7 79 73.4
Gohir.D12G044850 Gossypium hirsutum HOM05D005267 ORTHO05D006303 8.9e-29 131.3 78 76.9
Gohir.D03G023232 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.0e-28 130.2 79 75.9
Gohir.A01G123000 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.4e-28 129.4 79 74.7
Gohir.A06G056200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.4e-28 129.4 79 74.7
Gohir.D08G106200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 5.8e-28 128.6 78 75.6
Gohir.D11G259301 Gossypium hirsutum HOM05D005267 ORTHO05D006303 5.8e-28 128.6 78 75.6
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 9.5e-23 111.3 67 74.6
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 1.6e-22 110.5 96 64.6
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 3.1e-21 106.3 100 59.0
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 2.0e-20 103.6 66 71.2
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 3.7e-19 99.4 119 50.4
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 3.9e-16 89.4 79 57.0
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 1.1e-15 87.8 79 55.7
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 2.5e-15 86.7 90 51.1
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 5.6e-15 85.5 64 65.6
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 5.6e-15 85.5 72 61.1
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 7.3e-15 85.1 49 73.5
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 1.2e-14 84.3 47 74.5
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 2.8e-14 83.2 71 57.7
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 6.2e-14 82.0 91 49.5
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 1.1e-13 81.3 93 46.2
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 5.2e-13 79.0 169 30.8
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 4.4e-12 75.9 67 53.7
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 1.3e-11 74.3 185 27.0
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 1.1e-10 71.2 45 66.7
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 4.1e-10 69.3 186 25.3
Pp3c20_11400 Physcomitrium patens HOM05D005267 ORTHO05D006303 5.4e-10 68.9 173 24.9
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 1.2e-09 67.8 171 26.9
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 7.8e-09 65.1 175 29.7
FvH4_6g21293 Fragaria vesca HOM05D005267 ORTHO05D006303 7.8e-09 65.1 35 80.0
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 5.1e-08 62.4 34 76.5
AagrBONN_evm.TU.Sc2ySwM_362.204 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.5e-07 60.8 133 30.8
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 5.6e-07 58.9 209 23.0


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