Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 2.0e-147 525.8 267 100.0
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.4e-100 370.2 271 74.9
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 3.1e-92 342.4 268 69.8
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 1.5e-91 340.1 268 69.4
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.1e-89 334.0 267 67.4
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 8.7e-71 271.2 269 58.0
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 7.3e-70 268.1 268 53.4
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 7.3e-70 268.1 266 55.3
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 7.3e-70 268.1 268 54.9
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 4.5e-67 258.8 265 56.6
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 3.5e-64 249.2 268 53.4
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 6.0e-64 248.4 242 55.8
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 3.9e-63 245.7 269 54.3
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 6.7e-63 245.0 266 51.9
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 4.3e-62 242.3 268 54.1
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 1.3e-61 240.7 265 53.6
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 3.7e-61 239.2 238 53.4
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 5.3e-60 235.3 237 55.7
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 2.1e-56 223.4 267 50.2
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 5.7e-54 215.3 238 52.9
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 7.4e-54 214.9 272 48.5
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 9.6e-54 214.5 272 50.0
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.3e-53 214.2 265 47.9
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.3e-53 214.2 264 49.6
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 2.1e-53 213.4 270 48.5
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 2.8e-53 213.0 265 48.3
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 6.3e-53 211.8 251 51.8
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 3.1e-52 209.5 271 50.2
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 3.1e-52 209.5 233 52.8
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.5e-51 207.2 250 51.2
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 2.6e-51 206.5 262 47.3
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 3.4e-51 206.1 260 50.0
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 4.5e-51 205.7 249 50.2
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.9e-51 205.3 262 47.7
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 1.0e-50 204.5 204 56.9
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.7e-50 203.8 262 47.7
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 1.7e-50 203.8 259 45.6
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 2.9e-50 203.0 270 48.1
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 8.4e-50 201.4 262 48.5
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.4e-49 200.7 241 52.7
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.9e-49 200.3 262 48.1
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 3.2e-49 199.5 256 50.8
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 4.2e-49 199.1 242 49.6
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.5e-49 198.7 267 47.2
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 9.3e-49 198.0 254 47.2
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 3.0e-47 193.0 234 49.1
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 1.1e-46 191.0 241 48.5
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 5.7e-46 188.7 249 48.2
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.4e-44 184.1 265 43.4
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.2e-43 181.0 252 46.4
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 2.6e-43 179.9 266 42.5
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 3.4e-43 179.5 272 46.7
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.2e-42 176.8 265 42.3
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.8e-42 176.0 262 42.7
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 6.5e-42 175.3 227 45.8
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 8.5e-42 174.9 240 43.8
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.9e-41 173.7 216 50.0
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 7.2e-41 171.8 263 41.8
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 1.2e-40 171.0 273 44.0
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 3.6e-40 169.5 275 36.7
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 4.6e-40 169.1 296 40.2
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 7.9e-40 168.3 227 44.5
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 1.8e-39 167.2 239 41.4
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.8e-39 167.2 245 42.9
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 3.9e-39 166.0 294 39.5
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 1.3e-37 161.0 237 44.7
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 8.2e-37 158.3 229 43.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.4e-36 157.5 276 39.9
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 6.9e-36 155.2 267 39.3
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.6e-35 153.3 272 38.2
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 7.7e-35 151.8 248 40.7
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 2.2e-34 150.2 277 37.9
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 2.5e-33 146.7 252 40.5
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 1.6e-32 144.1 226 40.7
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 6.7e-31 138.7 293 34.8
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.3e-29 134.4 265 38.1
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.3e-29 134.4 307 38.1
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 6.3e-29 132.1 272 37.1
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 5.3e-28 129.0 227 41.0
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.2e-27 127.9 317 34.4
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.1e-24 117.1 94 63.8
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 4.7e-24 115.9 257 32.3
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 8.8e-23 111.7 236 36.0
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 5.7e-22 109.0 148 45.3
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 5.3e-20 102.4 108 50.0
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 1.6e-19 100.9 87 59.8
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 3.5e-19 99.8 109 48.6
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 3.5e-19 99.8 109 48.6
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 3.5e-19 99.8 109 48.6
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 3.5e-19 99.8 109 48.6
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 3.5e-19 99.8 109 48.6
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 5.9e-19 99.0 149 41.6
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 5.9e-19 99.0 190 35.8
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.3e-18 97.8 193 37.8
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 2.2e-18 97.1 160 39.4
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 2.9e-18 96.7 151 41.7
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 1.5e-17 94.4 80 52.5
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 2.5e-17 93.6 236 33.1
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 1.3e-13 81.3 102 51.0
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 2.2e-13 80.5 78 51.3
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 5.0e-10 69.3 89 39.3
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 2.7e-08 63.5 72 45.8
PSO017G5758 Papaver somniferum HOM05D002304 ORTHO05D002363 2.6e-06 57.0 65 43.1
PSO478G2317 Papaver somniferum HOM05D002304 ORTHO05D002363 2.6e-06 57.0 65 43.1
AUR62005698 Chenopodium quinoa HOM05D002304 ORTHO05D002363 9.8e-06 55.1 75 42.7
AUR62028858 Chenopodium quinoa HOM05D002304 ORTHO05D002363 9.8e-06 55.1 75 42.7
Cc04_g08240 Coffea canephora HOM05D002304 ORTHO05D002363 9.8e-06 55.1 54 50.0
FAN14G2589 Fragaria x ananassa HOM05D007404 ORTHO05D009281 9.8e-06 55.1 185 33.5


User provided reference genes

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