Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.10G014600 Carya illinoinensis HOM05D003709 ORTHO05D004364 3.0e-74 282.0 165 100.0
TWI77G0334 Tripterygium wilfordii HOM05D003709 ORTHO05D004364 2.3e-61 239.2 136 87.5
GSVIVG01033901001 Vitis vinifera HOM05D003709 ORTHO05D004364 3.0e-61 238.8 136 88.2
Duzib093G0911 Durio zibethinus HOM05D003709 ORTHO05D004364 6.6e-61 237.7 136 86.8
Dinv31727 Davidia involucrata HOM05D003709 ORTHO05D004364 8.6e-61 237.3 136 85.3
Cpa.g.c29173.2 Carica papaya HOM05D003709 ORTHO05D004364 2.5e-60 235.7 136 86.8
FvH4_2g10910 Fragaria vesca HOM05D003709 ORTHO05D004364 3.3e-60 235.3 136 84.6
FAN20G0151 Fragaria x ananassa HOM05D003709 ORTHO05D004364 3.3e-60 235.3 136 84.6
QL07p038048 Quercus lobata HOM05D003709 ORTHO05D004364 3.3e-60 235.3 165 73.9
FAN27G1255 Fragaria x ananassa HOM05D003709 ORTHO05D004364 7.3e-60 234.2 136 83.8
vmacro07432 Vaccinium macrocarpon HOM05D003709 ORTHO05D004364 1.2e-59 233.4 136 83.8
FAN15G3210 Fragaria x ananassa HOM05D003709 ORTHO05D004364 1.6e-59 233.0 136 83.1
Eucgr.A02626 Eucalyptus grandis HOM05D003709 ORTHO05D004364 2.1e-59 232.6 136 85.3
FAN24G0281 Fragaria x ananassa HOM05D003709 ORTHO05D004364 2.8e-59 232.3 136 83.8
RcHm_v2.0_Chr6g0269071 Rosa chinensis HOM05D003709 ORTHO05D004364 2.8e-59 232.3 136 84.6
Actinidia12698 Actinidia chinensis HOM05D003709 ORTHO05D004364 6.2e-59 231.1 136 82.4
Actinidia18412 Actinidia chinensis HOM05D003709 ORTHO05D004364 6.2e-59 231.1 136 82.4
Hma1.2p1_1724F.1_g299425 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 6.2e-59 231.1 136 85.3
Gohir.D09G133000 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.0e-58 230.3 136 83.8
Gorai.006G152500 Gossypium raimondii HOM05D003709 ORTHO05D004364 1.0e-58 230.3 136 83.8
Hma1.2p1_0245F.1_g101590 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 1.8e-58 229.6 136 83.1
Cc06_g06250 Coffea canephora HOM05D003709 ORTHO05D004364 2.3e-58 229.2 136 85.3
Lj1C125T5 Lonicera japonica HOM05D003709 ORTHO05D004364 2.3e-58 229.2 136 83.8
Thecc.05G096700 Theobroma cacao HOM05D003709 ORTHO05D004364 5.2e-58 228.0 136 83.1
CANSAT64G1889 Cannabis sativa HOM05D003709 ORTHO05D004364 6.8e-58 227.6 136 83.1
Gohir.A09G141700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.8e-58 227.6 136 83.1
ClCG03G000710 Citrullus lanatus HOM05D003709 ORTHO05D004364 8.9e-58 227.3 136 83.8
PGR004G2656 Punica granatum HOM05D003709 ORTHO05D004364 8.9e-58 227.3 136 83.1
SGA_v2.0_scaffold13G06687 Striga asiatica HOM05D003709 ORTHO05D004364 1.5e-57 226.5 136 80.9
THA.LOC104803461 Tarenaya hassleriana HOM05D003709 ORTHO05D004364 3.4e-57 225.3 136 82.4
THA.LOC104826817 Tarenaya hassleriana HOM05D003709 ORTHO05D004364 3.4e-57 225.3 136 82.4
ECA247G0210 Erigeron canadensis HOM05D003709 ORTHO05D004364 5.8e-57 224.6 136 81.6
MBI17_g01496_MAGBIO Magnolia biondii HOM05D003709 ORTHO05D004364 5.8e-57 224.6 129 84.5
DCAR_020733 Daucus carota HOM05D003709 ORTHO05D004364 9.8e-57 223.8 136 81.6
Sed0021250 Sechium edule HOM05D003709 ORTHO05D004364 9.8e-57 223.8 136 83.1
Actinidia05396 Actinidia chinensis HOM05D003709 ORTHO05D004364 1.3e-56 223.4 136 80.1
Prupe.8G077900 Prunus persica HOM05D003709 ORTHO05D004364 1.7e-56 223.0 136 82.4
CSS0033506 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 2.2e-56 222.6 136 81.6
MSTRG.5871 Avicennia marina HOM05D003709 ORTHO05D004364 2.9e-56 222.2 136 80.9
PSO357G0160 Papaver somniferum HOM05D003709 ORTHO05D004364 2.9e-56 222.2 136 80.9
Manes.08G029100 Manihot esculenta HOM05D003709 ORTHO05D004364 3.7e-56 221.9 137 82.5
Gorai.007G357100 Gossypium raimondii HOM05D003709 ORTHO05D004364 6.4e-56 221.1 136 82.4
CSS0019397 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 1.1e-55 220.3 136 80.9
CSS0048031 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 1.4e-55 219.9 136 80.9
HanXRQChr04g0114081 Helianthus annuus HOM05D003709 ORTHO05D004364 1.4e-55 219.9 136 80.1
CsaV3_3G037560 Cucumis sativus L. HOM05D003709 ORTHO05D004364 1.9e-55 219.5 136 80.9
MD05G1051100 Malus domestica HOM05D003709 ORTHO05D004364 2.4e-55 219.2 136 81.6
Nn6g34801 Nelumbo nucifera HOM05D003709 ORTHO05D004364 2.4e-55 219.2 136 80.9
Aqoxy4G02712 Aquilegia oxysepala HOM05D003709 ORTHO05D004364 4.1e-55 218.4 136 80.9
Haze_19671 Corylus avellana HOM05D003709 ORTHO05D004364 4.1e-55 218.4 166 71.1
Glyma.19G196500 Glycine max HOM05D003709 ORTHO05D004364 5.4e-55 218.0 136 80.9
MD10G1058500 Malus domestica HOM05D003709 ORTHO05D004364 5.4e-55 218.0 136 81.6
Sopen10g032700 Solanum pennellii HOM05D003709 ORTHO05D004364 5.4e-55 218.0 136 80.9
Oeu007203.1 Olea europaea HOM05D003709 ORTHO05D004364 9.2e-55 217.2 136 81.6
Nitab4.5_0001801g0070 Nicotiana tabacum HOM05D003709 ORTHO05D004364 1.2e-54 216.9 136 79.4
PGSC0003DMG400028247 Solanum tuberosum HOM05D003709 ORTHO05D004364 1.2e-54 216.9 136 80.1
MELO3C009499.2 Cucumis melo HOM05D003709 ORTHO05D004364 1.6e-54 216.5 136 78.7
Lsat_1_v5_gn_9_14520 Lactuca sativa HOM05D003709 ORTHO05D004364 2.0e-54 216.1 136 77.9
Ciclev10013818m.g Citrus clementina HOM05D003709 ORTHO05D004364 2.7e-54 215.7 138 81.2
Rhsim03G0069600 Rhododendron simsii HOM05D003709 ORTHO05D004364 2.7e-54 215.7 203 58.1
EL10Ac7g16841 Beta vulgaris HOM05D003709 ORTHO05D004364 3.5e-54 215.3 136 80.1
EL10Ac7g16842 Beta vulgaris HOM05D003709 ORTHO05D004364 3.5e-54 215.3 136 80.1
Peaxi162Scf00096g00098 Petunia axillaris HOM05D003709 ORTHO05D004364 7.8e-54 214.2 136 78.7
Psat3g030960 Pisum sativum HOM05D003709 ORTHO05D004364 1.0e-53 213.8 136 79.4
Lj2g0024912 Lotus japonicus HOM05D003709 ORTHO05D004364 1.3e-53 213.4 165 67.3
Solyc10g083220.3 Solanum lycopersicum HOM05D003709 ORTHO05D004364 1.3e-53 213.4 136 80.9
Atru.chr8.1435 Acer truncatum HOM05D003709 ORTHO05D004364 2.3e-53 212.6 165 70.3
Glyma.03G198800 Glycine max HOM05D003709 ORTHO05D004364 3.0e-53 212.2 136 78.7
Lalb_Chr20g0111541 Lupinus albus HOM05D003709 ORTHO05D004364 3.0e-53 212.2 136 77.9
CAN.G841.14 Capsicum annuum HOM05D003709 ORTHO05D004364 5.0e-53 211.5 136 78.7
Ca_09030_v3 Cicer arietinum L. HOM05D003709 ORTHO05D004364 6.6e-53 211.1 136 77.9
HPP92_028584 Vanilla planifolia HOM05D003709 ORTHO05D004364 6.6e-53 211.1 136 75.0
Ciclev10012932m.g Citrus clementina HOM05D003709 ORTHO05D004364 8.6e-53 210.7 138 79.0
Gohir.A04G147400 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.1e-52 210.3 127 80.3
HanXRQChr08g0228531 Helianthus annuus HOM05D003709 ORTHO05D004364 3.3e-52 208.8 136 77.2
Phvul.001G193000 Phaseolus vulgaris HOM05D003709 ORTHO05D004364 4.3e-52 208.4 136 78.7
VMungo1383G1751 Vigna mungo HOM05D003709 ORTHO05D004364 4.3e-52 208.4 136 80.9
Migut.J00663 Erythranthe guttata HOM05D003709 ORTHO05D004364 7.3e-52 207.6 137 76.6
PSO339G2742 Papaver somniferum HOM05D003709 ORTHO05D004364 9.5e-52 207.2 137 77.4
arahy.Tifrunner.gnm1.ann1.VRIY4R Arachis hypogaea HOM05D003709 ORTHO05D004364 3.6e-51 205.3 136 77.9
TPR.G23331 Trifolium pratense HOM05D003709 ORTHO05D004364 3.6e-51 205.3 136 75.0
arahy.Tifrunner.gnm1.ann1.K65CIQ Arachis hypogaea HOM05D003709 ORTHO05D004364 4.7e-51 204.9 136 77.9
CDE04G0652 Ceratophyllum demersum HOM05D003709 ORTHO05D004364 6.2e-51 204.5 136 75.0
Thhalv10014881m.g Eutrema salsugineum HOM05D003709 ORTHO05D004364 1.8e-50 203.0 136 75.7
Gohir.A13G235900 Gossypium hirsutum HOM05D003709 ORTHO05D004364 3.1e-50 202.2 129 77.5
BcaB01g05734 Brassica carinata HOM05D003709 ORTHO05D004364 4.0e-50 201.8 136 75.7
BcaC06g32330 Brassica carinata HOM05D003709 ORTHO05D004364 6.8e-50 201.1 136 75.7
BcaC06g32333 Brassica carinata HOM05D003709 ORTHO05D004364 6.8e-50 201.1 136 75.7
A10p30240 Brassica napus HOM05D003709 ORTHO05D004364 6.8e-50 201.1 136 75.7
C09p70650 Brassica napus HOM05D003709 ORTHO05D004364 6.8e-50 201.1 136 75.7
BolC9t59821H Brassica oleracea HOM05D003709 ORTHO05D004364 6.8e-50 201.1 136 75.7
BraA10t45062Z Brassica rapa HOM05D003709 ORTHO05D004364 6.8e-50 201.1 136 75.7
CARHR206940 Cardamine hirsuta HOM05D003709 ORTHO05D004364 8.9e-50 200.7 136 75.0
Sp6g36640 Schrenkiella parvula HOM05D003709 ORTHO05D004364 8.9e-50 200.7 136 75.7
Nitab4.5_0005187g0010 Nicotiana tabacum HOM05D003709 ORTHO05D004364 1.2e-49 200.3 136 77.9
Aa31sc52G10 Aethionema arabicum HOM05D003709 ORTHO05D004364 1.5e-49 199.9 136 75.0
AL6G16240 Arabidopsis lyrata HOM05D003709 ORTHO05D004364 1.5e-49 199.9 136 75.0
A03p02630 Brassica napus HOM05D003709 ORTHO05D004364 1.5e-49 199.9 136 75.0
BraA03t09624Z Brassica rapa HOM05D003709 ORTHO05D004364 1.5e-49 199.9 136 75.0
Carub.0006s0511 Capsella rubella HOM05D003709 ORTHO05D004364 3.4e-49 198.7 136 75.0
Medtr7g105350 Medicago truncatula HOM05D003709 ORTHO05D004364 4.4e-49 198.4 136 72.8
Potri.016G074700 Populus trichocarpa HOM05D003709 ORTHO05D004364 4.4e-49 198.4 165 62.4
AT5G06240 Arabidopsis thaliana HOM05D003709 ORTHO05D004364 1.3e-48 196.8 136 74.3
Sabra06G0074500 Salix brachista HOM05D003709 ORTHO05D004364 8.3e-48 194.1 136 71.3
Sabra16G0080200 Salix brachista HOM05D003709 ORTHO05D004364 1.1e-47 193.7 136 70.6
ATR0315G087 Amborella trichopoda HOM05D003709 ORTHO05D004364 1.9e-47 193.0 140 72.9
Gorai.002G197000 Gossypium raimondii HOM05D003709 ORTHO05D004364 4.1e-47 191.8 136 72.8
Zm00001eb266720 Zea mays HOM05D003709 ORTHO05D004364 7.8e-46 187.6 144 66.7
BcaB01g05985 Brassica carinata HOM05D003709 ORTHO05D004364 8.6e-45 184.1 156 64.7
Gorai.012G000500 Gossypium raimondii HOM05D003709 ORTHO05D004364 3.3e-44 182.2 161 62.7
Ah.15g090600 Amaranthus hybridus HOM05D003709 ORTHO05D004364 9.5e-44 180.6 168 61.9
unitig_744.g24704 Utricularia gibba HOM05D003709 ORTHO05D004364 1.2e-43 180.3 164 61.0
Os05g0112750 Oryza sativa ssp. japonica HOM05D003709 ORTHO05D004364 3.1e-42 175.6 135 64.4
Gohir.D04G000040 Gossypium hirsutum HOM05D003709 ORTHO05D004364 8.9e-42 174.1 150 61.3
Sc20g0006470 Simmondsia chinensis HOM05D003709 ORTHO05D004364 1.7e-40 169.9 111 73.9
Actinidia27230 Actinidia chinensis HOM05D003709 ORTHO05D004364 3.8e-40 168.7 100 80.0
Actinidia28628 Actinidia chinensis HOM05D003709 ORTHO05D004364 3.8e-40 168.7 100 80.0
Actinidia37294 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.1e-39 165.2 100 78.0
COL.COLO4_29662 Corchorus olitorius HOM05D003709 ORTHO05D004364 9.2e-39 164.1 100 80.0
Gohir.D11G326500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.5e-36 156.8 102 77.5
Lalb_Chr25g0288201 Lupinus albus HOM05D003709 ORTHO05D004364 8.9e-34 147.5 101 72.3
Gohir.1Z049623 Gossypium hirsutum HOM05D003709 ORTHO05D004364 9.9e-33 144.1 74 90.5
MD07G1268900 Malus domestica HOM05D003709 ORTHO05D004364 1.7e-32 143.3 101 73.3
MD13G1200900 Malus domestica HOM05D003709 ORTHO05D004364 2.2e-32 142.9 101 71.3
TAR623G0195 Trochodendron aralioides HOM05D003709 ORTHO05D004364 6.4e-32 141.4 80 87.5
Gohir.A13G149700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.4e-31 140.2 99 73.7
Gorai.004G000400 Gossypium raimondii HOM05D003709 ORTHO05D004364 1.4e-31 140.2 90 78.9
AUR62006246 Chenopodium quinoa HOM05D003709 ORTHO05D004364 1.6e-30 136.7 90 81.1
Gohir.1Z049729 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.6e-30 136.7 81 79.0
AUR62028486 Chenopodium quinoa HOM05D003709 ORTHO05D004364 2.1e-30 136.3 90 81.1
Gohir.A10G101550 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.6e-30 135.2 90 77.8
Gorai.007G188700 Gossypium raimondii HOM05D003709 ORTHO05D004364 4.6e-30 135.2 91 73.6
Gohir.D01G158750 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.0e-30 134.8 135 60.7
Dinv21156 Davidia involucrata HOM05D003709 ORTHO05D004364 1.3e-29 133.7 90 76.7
Gohir.A01G177700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.3e-29 133.7 90 76.7
ClCG10G018670 Citrullus lanatus HOM05D003709 ORTHO05D004364 1.1e-28 130.6 73 82.2
Gohir.D04G000065 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.3e-28 128.6 91 70.3
Sabra16G0077300 Salix brachista HOM05D003709 ORTHO05D004364 5.6e-28 128.3 100 63.0
Haze_19660 Corylus avellana HOM05D003709 ORTHO05D004364 9.6e-28 127.5 143 53.8
Aa31LG11G7240 Aethionema arabicum HOM05D003709 ORTHO05D004364 1.6e-27 126.7 90 74.4
Gohir.A12G001133 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.6e-27 126.7 85 70.6
Pp3c3_9770 Physcomitrium patens HOM05D003709 ORTHO05D004364 2.4e-26 122.9 139 48.2
Gohir.D02G000500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.2e-25 120.6 151 51.0
Gohir.D11G176500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.2e-25 120.6 65 84.6
Hund28303 Selenicereus undatus HOM05D003709 ORTHO05D004364 3.8e-24 115.5 87 70.1
SGA_v2.0_scaffold123G33400 Striga asiatica HOM05D003709 ORTHO05D004364 6.4e-24 114.8 68 77.9
Mapoly0009s0017 Marchantia polymorpha HOM05D003709 ORTHO05D004364 1.9e-23 113.2 138 52.2
Nn2g14234 Nelumbo nucifera HOM05D003709 ORTHO05D004364 1.9e-23 113.2 135 54.1
AagrBONN_evm.TU.Sc2ySwM_228.2513 Anthoceros agrestis HOM05D003709 ORTHO05D004364 2.7e-22 109.4 135 43.0
Gohir.A12G074200 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.0e-22 108.2 104 57.7
CBR_g45657 Chara braunii HOM05D003709 ORTHO05D004364 8.7e-21 104.4 139 44.6
Hund28305 Selenicereus undatus HOM05D003709 ORTHO05D004364 7.4e-20 101.3 87 63.2
Hma1.2p1_2017F.1_g311180 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 9.6e-20 100.9 140 50.0
arahy.Tifrunner.gnm1.ann1.PZI97L Arachis hypogaea HOM05D003709 ORTHO05D004364 6.2e-19 98.2 100 59.0
Manes.09G051450 Manihot esculenta HOM05D003709 ORTHO05D004364 1.2e-17 94.0 69 76.8
SMO197G0068 Selaginella moellendorffii HOM05D003709 ORTHO05D004364 5.8e-17 91.7 140 39.3
Gohir.1Z049340 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.9e-16 88.6 48 85.4
Gohir.D03G178450 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.9e-16 88.6 48 85.4
Gorai.013G000400 Gossypium raimondii HOM05D003709 ORTHO05D004364 6.4e-16 88.2 48 83.3
Gohir.D12G071401 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.4e-15 87.0 117 47.0
Haze_10129 Corylus avellana HOM05D003709 ORTHO05D004364 2.4e-15 86.3 58 77.6
Gohir.D13G000580 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.2e-15 85.5 48 81.2
Haze_00443 Corylus avellana HOM05D000273 ORTHO05D000198 7.1e-15 84.7 58 74.1
Gorai.008G079100 Gossypium raimondii HOM05D003709 ORTHO05D004364 9.3e-15 84.3 118 45.8
Gohir.A05G416501 Gossypium hirsutum HOM05D001765 ORTHO05D003527 4.6e-14 82.0 59 69.5
Aa31LG11G7230 Aethionema arabicum HOM05D003709 ORTHO05D004364 7.9e-14 81.3 47 78.7
Gohir.A05G416901 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.3e-13 79.7 59 67.8
Gohir.A01G000401 Gossypium hirsutum HOM05D004098 ORTHO05D005215 5.1e-13 78.6 40 87.5
AUR62028484 Chenopodium quinoa HOM05D003709 ORTHO05D138253 1.9e-12 76.6 57 73.7
AUR62028485 Chenopodium quinoa HOM05D003709 ORTHO05D004364 1.9e-12 76.6 57 73.7
Peaxi162Scf00013g00154 Petunia axillaris HOM05D003709 ORTHO05D004364 1.9e-12 76.6 90 50.0
Haze_09934 Corylus avellana HOM05D003709 ORTHO05D004364 4.3e-12 75.5 58 69.0
Gohir.A09G000259 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.3e-12 75.5 41 87.8
Gorai.006G066600 Gossypium raimondii HOM05D003709 ORTHO05D004364 6.2e-11 71.6 37 91.9
COL.COLO4_29661 Corchorus olitorius HOM05D003709 ORTHO05D004364 2.4e-10 69.7 37 89.2
Gohir.A03G211700 Gossypium hirsutum HOM05D001759 ORTHO05D004364 2.6e-09 66.2 35 88.6
Gohir.D02G000150 Gossypium hirsutum HOM05D003709 ORTHO05D004364 3.4e-09 65.9 38 81.6
Gohir.A11G282813 Gossypium hirsutum HOM05D003709 ORTHO05D004364 7.6e-09 64.7 36 88.9
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 1.0e-08 64.3 42 73.8
Potri.006G208200 Populus trichocarpa HOM05D003709 ORTHO05D004364 2.2e-08 63.2 44 75.0
C03p03020 Brassica napus HOM05D003709 ORTHO05D004364 6.5e-08 61.6 35 85.7
RcHm_v2.0_Chr2g0174001 Rosa chinensis HOM05D003709 ORTHO05D004364 6.5e-08 61.6 47 61.7
TAR636G0224 Trochodendron aralioides HOM05D003709 ORTHO05D004364 4.2e-07 58.9 86 41.9
Sabra16G0077200 Salix brachista HOM05D002582 ORTHO05D002781 3.5e-06 55.8 29 89.7
Lalb_Chr25g0288191 Lupinus albus HOM05D003709 ORTHO05D004364 6.0e-06 55.1 29 89.7


User provided reference genes

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