Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 1.2e-126 456.4 224 100.0
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 3.0e-109 398.7 226 85.8
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 1.2e-105 386.7 224 82.6
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 3.8e-104 381.7 219 83.6
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 3.2e-103 378.6 224 79.0
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 9.4e-103 377.1 225 81.3
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 9.4e-103 377.1 214 83.2
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 1.6e-102 376.3 214 83.2
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 4.7e-102 374.8 214 82.7
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 8.0e-102 374.0 214 82.7
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 1.0e-101 373.6 224 79.9
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 1.0e-101 373.6 216 81.9
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 1.4e-101 373.2 215 82.8
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 5.2e-101 371.3 216 81.9
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 5.2e-101 371.3 221 80.1
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 6.8e-101 370.9 224 79.0
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 8.8e-101 370.5 218 80.7
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 1.2e-100 370.2 224 78.6
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 1.5e-100 369.8 215 80.5
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 3.4e-100 368.6 218 81.2
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 3.4e-100 368.6 210 81.4
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 9.8e-100 367.1 226 78.3
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 9.8e-100 367.1 219 79.0
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 1.7e-99 366.3 216 79.6
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.2e-99 365.9 225 77.8
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.2e-99 365.9 225 79.1
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 3.7e-99 365.2 230 77.4
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 3.7e-99 365.2 205 82.0
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 3.7e-99 365.2 221 78.7
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 6.3e-99 364.4 205 83.4
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 1.1e-98 363.6 219 78.1
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 1.4e-98 363.2 212 80.7
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.8e-98 362.8 218 79.8
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 2.4e-98 362.5 213 80.8
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 2.4e-98 362.5 230 76.5
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 2.4e-98 362.5 225 78.7
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 3.1e-98 362.1 213 80.3
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 5.4e-98 361.3 227 77.5
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 5.4e-98 361.3 224 77.7
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 5.4e-98 361.3 212 80.7
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 5.4e-98 361.3 225 77.8
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 7.0e-98 360.9 212 81.1
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 1.2e-97 360.1 224 76.3
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 1.6e-97 359.8 240 72.1
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 2.0e-97 359.4 214 77.6
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.7e-97 359.0 214 77.6
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 7.7e-97 357.5 225 77.3
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 2.2e-96 355.9 224 73.2
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 2.9e-96 355.5 214 77.1
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.8e-96 355.1 225 76.9
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 1.1e-95 353.6 222 76.1
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 1.5e-95 353.2 214 79.0
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 1.2e-94 350.1 210 76.7
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 2.7e-94 349.0 215 77.2
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 2.7e-94 349.0 225 73.8
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 3.6e-94 348.6 228 75.4
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.8e-93 346.3 199 81.9
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 2.3e-93 345.9 224 72.8
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 4.0e-93 345.1 219 73.1
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 1.2e-92 343.6 224 73.7
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 3.4e-92 342.0 224 72.8
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 4.4e-92 341.7 215 74.9
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 7.5e-92 340.9 227 74.0
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 9.8e-92 340.5 227 74.0
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 9.8e-92 340.5 227 74.0
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.7e-91 339.7 225 70.2
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 2.8e-91 339.0 216 72.2
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 2.8e-91 339.0 223 73.1
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 6.3e-91 337.8 218 74.8
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 8.3e-91 337.4 225 72.0
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 1.8e-90 336.3 219 70.8
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.4e-90 335.9 225 71.1
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 4.1e-90 335.1 203 76.4
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 4.1e-90 335.1 230 73.0
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 4.1e-90 335.1 230 73.0
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 3.5e-89 332.0 219 70.8
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.0e-88 330.5 216 72.2
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 2.3e-88 329.3 178 86.0
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 3.0e-85 318.9 209 70.3
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 8.3e-83 310.8 165 85.5
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 2.4e-82 309.3 217 70.5
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 3.2e-82 308.9 178 79.8
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 2.0e-81 306.2 176 77.3
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 4.7e-78 295.0 258 58.5
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 3.1e-77 292.4 218 67.4
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 5.2e-77 291.6 180 75.6
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 2.7e-73 279.3 219 67.6
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 1.6e-70 270.0 183 66.7
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 8.1e-70 267.7 171 74.9
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 2.9e-67 259.2 152 76.3
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 6.4e-67 258.1 216 65.3
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 6.4e-67 258.1 220 56.4
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 3.3e-63 245.7 192 57.3
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 2.0e-60 236.5 224 54.9
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 2.0e-60 236.5 216 53.2
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 5.8e-60 235.0 140 77.1
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 6.6e-56 221.5 127 80.3
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 1.9e-55 219.9 130 76.9
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.6e-46 190.3 115 77.4
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 6.2e-46 188.3 143 64.3
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 6.4e-43 178.3 148 52.7
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 7.1e-42 174.9 104 75.0
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 2.8e-38 162.9 205 37.6
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 1.5e-36 157.1 128 64.1
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 9.9e-36 154.5 128 62.5
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 7.1e-34 148.3 220 32.7
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.6e-28 129.8 100 56.0
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 3.8e-27 125.9 166 33.7
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 1.1e-26 124.4 87 66.7
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.6e-25 120.6 86 67.4
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 4.6e-25 119.0 82 65.9
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 2.0e-20 103.6 68 61.8
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 7.6e-20 101.7 70 70.0
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.1e-18 97.8 51 80.4
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 4.6e-17 92.4 71 64.8
CBR_g50885 Chara braunii HOM05D006727 ORTHO05D008408 9.7e-15 84.7 125 35.2
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 4.5e-12 75.9 58 70.7
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 8.5e-11 71.6 70 57.1
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 3.3e-07 59.7 94 41.5
BcaB01g00436 Brassica carinata HOM05D006727 ORTHO05D008408 3.7e-06 56.2 72 47.2


User provided reference genes

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