Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G219400 Carya illinoinensis HOM05D005747 ORTHO05D007159 1.2e-46 189.5 98 100.0
Actinidia28901 Actinidia chinensis HOM05D005747 ORTHO05D007159 3.5e-25 118.2 104 62.5
Cfa020071 Carpinus fangiana HOM05D005747 ORTHO05D007159 5.9e-25 117.5 106 62.3
Haze_20552 Corylus avellana HOM05D005747 ORTHO05D007159 2.2e-24 115.5 106 61.3
CSS0033757 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.9e-24 115.2 104 61.5
Dinv37311 Davidia involucrata HOM05D005747 ORTHO05D007159 8.5e-24 113.6 104 63.5
Hma1.2p1_0205F.1_g087080 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 8.5e-24 113.6 97 66.0
Haze_20124 Corylus avellana HOM05D005747 ORTHO05D007159 1.1e-23 113.2 106 60.4
Actinidia08777 Actinidia chinensis HOM05D005747 ORTHO05D007159 1.5e-23 112.8 104 59.6
TAR633G0139 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.5e-23 112.8 97 63.9
CSS0033637 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.9e-23 112.5 104 59.6
vmacro07288 Vaccinium macrocarpon HOM05D005747 ORTHO05D007159 1.9e-23 112.5 98 63.3
CSS0022084 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 3.2e-23 111.7 104 59.6
Rhsim03G0092400 Rhododendron simsii HOM05D005747 ORTHO05D007159 3.2e-23 111.7 104 60.6
arahy.Tifrunner.gnm1.ann1.548B55 Arachis hypogaea HOM05D005747 ORTHO05D007159 4.2e-23 111.3 98 64.3
Nitab4.5_0000578g0140 Nicotiana tabacum HOM05D005747 ORTHO05D007159 4.2e-23 111.3 88 64.8
arahy.Tifrunner.gnm1.ann1.GC88CS Arachis hypogaea HOM05D005747 ORTHO05D007159 5.5e-23 110.9 98 63.3
Duzib128G1360 Durio zibethinus HOM05D005747 ORTHO05D007159 5.5e-23 110.9 106 60.4
Thecc.05G065200 Theobroma cacao HOM05D005747 ORTHO05D007159 5.5e-23 110.9 106 59.4
Nitab4.5_0002632g0020 Nicotiana tabacum HOM05D005747 ORTHO05D007159 7.2e-23 110.5 88 63.6
QL07p043606 Quercus lobata HOM05D005747 ORTHO05D007159 7.2e-23 110.5 106 60.4
arahy.Tifrunner.gnm1.ann1.47U1LD Arachis hypogaea HOM05D005747 ORTHO05D007159 9.4e-23 110.2 98 63.3
Manes.08G009800 Manihot esculenta HOM05D005747 ORTHO05D007159 9.4e-23 110.2 97 61.9
Duzib093G2107 Durio zibethinus HOM05D005747 ORTHO05D007159 1.2e-22 109.8 106 59.4
TAR369G0407 Trochodendron aralioides HOM05D005747 ORTHO05D007159 1.2e-22 109.8 97 62.9
arahy.Tifrunner.gnm1.ann1.W5J3RK Arachis hypogaea HOM05D005747 ORTHO05D007159 1.6e-22 109.4 98 63.3
MSTRG.19175 Avicennia marina HOM05D005747 ORTHO05D007159 1.6e-22 109.4 98 61.2
Atru.chr8.1820 Acer truncatum HOM05D005747 ORTHO05D007159 2.1e-22 109.0 96 65.6
Lj5g0010104 Lotus japonicus HOM05D005747 ORTHO05D007159 2.1e-22 109.0 104 60.6
PSO063G6473 Papaver somniferum HOM05D005747 ORTHO05D007159 2.1e-22 109.0 104 59.6
PSO339G2391 Papaver somniferum HOM05D005747 ORTHO05D007159 2.1e-22 109.0 104 59.6
TWI77G0618 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 2.7e-22 108.6 94 64.9
TWI74G1168 Tripterygium wilfordii HOM05D005747 ORTHO05D007159 3.6e-22 108.2 106 58.5
Migut.L01698 Erythranthe guttata HOM05D005747 ORTHO05D007159 4.7e-22 107.8 98 58.2
Nn7g38309 Nelumbo nucifera HOM05D005747 ORTHO05D007159 4.7e-22 107.8 97 63.9
Cc06_g04180 Coffea canephora HOM05D005747 ORTHO05D007159 8.0e-22 107.1 104 57.7
CANSAT80G0760 Cannabis sativa HOM05D005747 ORTHO05D007159 1.4e-21 106.3 106 57.5
Solyc09g008140.3 Solanum lycopersicum HOM05D005747 ORTHO05D007159 1.4e-21 106.3 98 58.2
Sopen09g002940 Solanum pennellii HOM05D005747 ORTHO05D007159 1.4e-21 106.3 98 58.2
SGA_v2.0_scaffold75G24844 Striga asiatica HOM05D005747 ORTHO05D007159 1.4e-21 106.3 98 59.2
EL10Ac1g00026 Beta vulgaris HOM05D005747 ORTHO05D007159 1.8e-21 105.9 97 61.9
Prupe.6G232700 Prunus persica HOM05D005747 ORTHO05D007159 1.8e-21 105.9 106 55.7
CAN.G900.40 Capsicum annuum HOM05D005747 ORTHO05D007159 2.3e-21 105.5 98 57.1
FAN05G2010 Fragaria x ananassa HOM05D005747 ORTHO05D007159 4.0e-21 104.8 104 56.7
FvH4_6g16280 Fragaria vesca HOM05D005747 ORTHO05D007159 5.2e-21 104.4 104 55.8
FAN14G5754 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.2e-21 104.4 104 55.8
Peaxi162Scf00701g00029 Petunia axillaris HOM05D005747 ORTHO05D007159 5.2e-21 104.4 98 56.1
GSVIVG01025728001 Vitis vinifera HOM05D005747 ORTHO05D007159 6.7e-21 104.0 106 56.6
CsaV3_3G035950 Cucumis sativus L. HOM05D005747 ORTHO05D007159 8.8e-21 103.6 97 58.8
Eucgr.A01688 Eucalyptus grandis HOM05D005747 ORTHO05D007159 8.8e-21 103.6 106 54.7
FAN02G1695 Fragaria x ananassa HOM05D005747 ORTHO05D007159 8.8e-21 103.6 96 58.3
Glyma.10G057000 Glycine max HOM05D005747 ORTHO05D007159 8.8e-21 103.6 106 56.6
Glyma.13G143500 Glycine max HOM05D005747 ORTHO05D007159 8.8e-21 103.6 106 57.5
CARHR210000 Cardamine hirsuta HOM05D005747 ORTHO05D007159 1.1e-20 103.2 101 58.4
MELO3C009353.2 Cucumis melo HOM05D005747 ORTHO05D007159 1.1e-20 103.2 97 58.8
Lalb_Chr20g0112621 Lupinus albus HOM05D005747 ORTHO05D007159 1.1e-20 103.2 104 55.8
THA.LOC104826911 Tarenaya hassleriana HOM05D005747 ORTHO05D007159 1.1e-20 103.2 106 54.7
MD04G1094200 Malus domestica HOM05D005747 ORTHO05D007159 1.5e-20 102.8 98 58.2
Manes.09G066900 Manihot esculenta HOM05D005747 ORTHO05D007159 1.5e-20 102.8 97 58.8
Aqoxy1G01163 Aquilegia oxysepala HOM05D005747 ORTHO05D007159 2.6e-20 102.1 104 53.8
Thhalv10015093m.g Eutrema salsugineum HOM05D005747 ORTHO05D007159 2.6e-20 102.1 97 58.8
Phvul.001G178800 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 2.6e-20 102.1 104 54.8
PGR004G0006 Punica granatum HOM05D005747 ORTHO05D007159 2.6e-20 102.1 106 55.7
ClCG10G020160 Citrullus lanatus HOM05D005747 ORTHO05D007159 3.3e-20 101.7 97 57.7
MD12G1113800 Malus domestica HOM05D005747 ORTHO05D007159 4.4e-20 101.3 98 58.2
TPR.G25697 Trifolium pratense HOM05D005747 ORTHO05D007159 4.4e-20 101.3 101 56.4
C02p00970 Brassica napus HOM05D001005 ORTHO05D000836 5.7e-20 100.9 97 57.7
FAN09G1333 Fragaria x ananassa HOM05D005747 ORTHO05D007159 5.7e-20 100.9 104 54.8
Lalb_Chr02g0155891 Lupinus albus HOM05D005747 ORTHO05D007159 5.7e-20 100.9 104 55.8
RcHm_v2.0_Chr3g0470141 Rosa chinensis HOM05D005747 ORTHO05D007159 5.7e-20 100.9 104 54.8
Gohir.D09G143100 Gossypium hirsutum HOM05D005747 ORTHO05D007159 7.4e-20 100.5 98 59.2
Gorai.006G164600 Gossypium raimondii HOM05D005747 ORTHO05D007159 7.4e-20 100.5 98 59.2
BcaC03g13014 Brassica carinata HOM05D005747 ORTHO05D007159 9.7e-20 100.1 97 57.7
Gohir.A09G147500 Gossypium hirsutum HOM05D005747 ORTHO05D007159 1.3e-19 99.8 97 59.8
Medtr1g063370 Medicago truncatula HOM05D005747 ORTHO05D007159 1.3e-19 99.8 104 55.8
Ciclev10013173m.g Citrus clementina HOM05D005747 ORTHO05D007159 1.7e-19 99.4 104 56.7
AL6G12680 Arabidopsis lyrata HOM05D005747 ORTHO05D007159 2.2e-19 99.0 97 57.7
Psat6g073040 Pisum sativum HOM05D005747 ORTHO05D007159 2.2e-19 99.0 104 55.8
Ca_11494_v3 Cicer arietinum L. HOM05D005747 ORTHO05D007159 3.7e-19 98.2 104 56.7
Sed0019850 Sechium edule HOM05D005747 ORTHO05D007159 3.7e-19 98.2 97 56.7
Glyma.19G183500 Glycine max HOM05D005747 ORTHO05D007159 4.8e-19 97.8 98 56.1
SalBow5G0179 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.8e-19 97.8 104 51.9
SalBow5G1412 Salvia bowleyana HOM05D005747 ORTHO05D007159 4.8e-19 97.8 104 51.9
Carub.0006s0216 Capsella rubella HOM05D005747 ORTHO05D007159 8.2e-19 97.1 97 56.7
Psat0s2933g0080 Pisum sativum HOM05D005747 ORTHO05D007159 8.2e-19 97.1 98 55.1
Phvul.007G149300 Phaseolus vulgaris HOM05D005747 ORTHO05D007159 1.1e-18 96.7 98 57.1
Potri.006G125300 Populus trichocarpa HOM05D005747 ORTHO05D007159 1.4e-18 96.3 104 53.8
Zm00001eb136890 Zea mays HOM05D005747 ORTHO05D007159 1.4e-18 96.3 97 55.7
AT5G03345 Arabidopsis thaliana HOM05D005747 ORTHO05D007159 2.4e-18 95.5 101 54.5
Sc02g0001670 Simmondsia chinensis HOM05D005747 ORTHO05D007159 2.4e-18 95.5 98 55.1
VMungo1383G0680 Vigna mungo HOM05D005747 ORTHO05D007159 2.4e-18 95.5 104 52.9
Sp6g39390 Schrenkiella parvula HOM05D005747 ORTHO05D007159 9.1e-18 93.6 96 55.2
Ah.05g172440 Amaranthus hybridus HOM05D005747 ORTHO05D007159 1.2e-17 93.2 95 55.8
Zm00001eb028740 Zea mays HOM05D005747 ORTHO05D007159 1.2e-17 93.2 97 53.6
Aa31LG3G2310 Aethionema arabicum HOM05D005747 ORTHO05D007159 1.6e-17 92.8 106 50.0
CSS0043170 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 2.0e-17 92.4 67 76.1
Medtr7g101880 Medicago truncatula HOM05D005747 ORTHO05D007159 2.0e-17 92.4 92 55.4
HPP92_009808 Vanilla planifolia HOM05D005747 ORTHO05D007159 2.0e-17 92.4 92 56.5
Hma1.2p1_0205F.1_g087090 Hydrangea macrophylla HOM05D005747 ORTHO05D007159 2.6e-17 92.0 104 56.7
Potri.016G091900 Populus trichocarpa HOM05D005747 ORTHO05D007159 2.6e-17 92.0 99 54.5
unitig_578.g16384 Utricularia gibba HOM05D005747 ORTHO05D007159 2.6e-17 92.0 98 50.0
TPR.G9369 Trifolium pratense HOM05D005747 ORTHO05D007159 4.5e-17 91.3 98 54.1
Os12g0566400 Oryza sativa ssp. japonica HOM05D005747 ORTHO05D007159 5.9e-17 90.9 97 51.5
Lj2A1109T71 Lonicera japonica HOM05D005747 ORTHO05D007159 1.3e-16 89.7 67 68.7
CSS0041044 Camellia sinensis var. sinensis HOM05D005747 ORTHO05D007159 1.7e-16 89.4 67 74.6
Lsat_1_v5_gn_6_25181 Lactuca sativa HOM05D005747 ORTHO05D007159 1.7e-16 89.4 95 52.6
Hund20347 Selenicereus undatus HOM05D005747 ORTHO05D007159 1.7e-16 89.4 69 66.7
AUR62004704 Chenopodium quinoa HOM05D005747 ORTHO05D007159 2.9e-16 88.6 81 63.0
Dinv35784 Davidia involucrata HOM05D005747 ORTHO05D007159 6.5e-16 87.4 50 88.0
PGSC0003DMG400003860 Solanum tuberosum HOM05D005747 ORTHO05D007159 1.5e-15 86.3 126 43.7
ECA233G4120 Erigeron canadensis HOM05D005747 ORTHO05D007159 2.5e-15 85.5 102 47.1
HanXRQChr13g0401071 Helianthus annuus HOM05D005747 ORTHO05D007159 4.2e-15 84.7 97 46.4
AUR62023620 Chenopodium quinoa HOM05D005747 ORTHO05D007159 7.2e-15 84.0 103 51.5
Oeu053677.1 Olea europaea HOM05D005747 ORTHO05D007159 9.4e-15 83.6 67 65.7
CDE06G0870 Ceratophyllum demersum HOM05D005747 ORTHO05D007159 4.7e-14 81.3 108 41.7
DCAR_020822 Daucus carota HOM05D005747 ORTHO05D007159 1.2e-12 76.6 67 61.2
HanXRQChr02g0051611 Helianthus annuus HOM05D005747 ORTHO05D007159 4.4e-12 74.7 97 42.3
Gorai.006G061900 Gossypium raimondii HOM05D005747 ORTHO05D007159 5.7e-12 74.3 100 49.0
Oeu045224.1 Olea europaea HOM05D005747 ORTHO05D007159 7.5e-12 73.9 77 54.5
Mapoly0011s0153 Marchantia polymorpha HOM05D005747 ORTHO05D007159 4.8e-11 71.2 97 43.3
Glyma.03G182900 Glycine max HOM05D005747 ORTHO05D007159 8.3e-11 70.5 127 40.9
SMO137G0056 Selaginella moellendorffii HOM05D005747 ORTHO05D007159 4.1e-10 68.2 95 41.1
SEGI_15519 Sequoiadendron giganteum HOM05D005747 ORTHO05D007159 4.1e-10 68.2 93 43.0
Pp3c5_16080 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.2e-09 66.6 92 40.2
Sabra16G0097500 Salix brachista HOM05D005747 ORTHO05D007159 2.0e-09 65.9 67 52.2
ATR0104G002 Amborella trichopoda HOM05D005747 ORTHO05D007159 2.7e-09 65.5 67 53.7
Pp3c6_8930 Physcomitrium patens HOM05D005747 ORTHO05D007159 1.0e-08 63.5 91 41.8
Lalb_Chr25g0289001 Lupinus albus HOM05D005747 ORTHO05D007159 1.7e-08 62.8 70 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1648 Anthoceros agrestis HOM05D005747 ORTHO05D007159 1.5e-07 59.7 92 38.0
unitig_8.g4716 Utricularia gibba HOM05D000027 ORTHO05D002055 4.7e-06 54.7 89 37.1


User provided reference genes

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