Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G202800 Carya illinoinensis HOM05D000371 ORTHO05D006177 8.5e-67 256.9 134 100.0
CiPaw.10G150300 Carya illinoinensis HOM05D000371 ORTHO05D006177 8.3e-30 134.0 106 71.7
Cfa017293 Carpinus fangiana HOM05D000371 ORTHO05D006177 4.0e-24 115.2 106 63.2
QL02p027403 Quercus lobata HOM05D000371 ORTHO05D006177 1.5e-23 113.2 107 66.4
Psat7g241000 Pisum sativum HOM05D000371 ORTHO05D006177 3.0e-19 99.0 109 55.0
TAR369G0679 Trochodendron aralioides HOM05D000371 ORTHO05D006177 5.1e-19 98.2 109 57.8
Medtr4g055500 Medicago truncatula HOM05D000371 ORTHO05D006177 1.1e-18 97.1 110 55.5
arahy.Tifrunner.gnm1.ann1.23E1K9 Arachis hypogaea HOM05D000371 ORTHO05D006177 4.3e-18 95.1 107 55.1
Potri.016G105100 Populus trichocarpa HOM05D000371 ORTHO05D006177 1.6e-17 93.2 108 55.6
Eucgr.C00633 Eucalyptus grandis HOM05D000371 ORTHO05D006177 2.1e-17 92.8 112 54.5
Sabra16G0104300 Salix brachista HOM05D000371 ORTHO05D006177 3.6e-17 92.0 108 55.6
arahy.Tifrunner.gnm1.ann1.YWW12F Arachis hypogaea HOM05D000371 ORTHO05D006177 4.7e-17 91.7 107 54.2
Ca_03543_v3 Cicer arietinum L. HOM05D000371 ORTHO05D006177 8.1e-17 90.9 109 52.3
LjContig00047_ERROPOS266959g0016401 Lotus japonicus HOM05D000371 ORTHO05D006177 1.4e-16 90.1 125 49.6
TPR.G17889 Trifolium pratense HOM05D000371 ORTHO05D006177 1.8e-16 89.7 110 53.6
Glyma.03G073714 Glycine max HOM05D000371 ORTHO05D006177 3.1e-16 89.0 108 50.9
Haze_20900 Corylus avellana HOM05D000371 ORTHO05D006177 6.8e-16 87.8 96 57.3
TAR623G0600 Trochodendron aralioides HOM05D000371 ORTHO05D006177 6.8e-16 87.8 109 51.4
Manes.15G172300 Manihot esculenta HOM05D000371 ORTHO05D006177 8.9e-16 87.4 111 52.3
Duzib106G1179 Durio zibethinus HOM05D000371 ORTHO05D006177 3.4e-15 85.5 108 51.9
Rhsim05G0200700 Rhododendron simsii HOM05D000371 ORTHO05D006177 3.4e-15 85.5 108 47.2
MBI14_g02853_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D006177 4.4e-15 85.1 106 50.0
CANSAT01G2772 Cannabis sativa HOM05D000371 ORTHO05D006177 7.6e-15 84.3 107 50.5
ClCG04G007520 Citrullus lanatus HOM05D000371 ORTHO05D006177 9.9e-15 84.0 110 50.9
VMungo0720G2985 Vigna mungo HOM05D000371 ORTHO05D006177 1.3e-14 83.6 108 50.9
Nn2g15155 Nelumbo nucifera HOM05D000371 ORTHO05D006177 1.7e-14 83.2 113 49.6
TWI74G1022 Tripterygium wilfordii HOM05D000371 ORTHO05D006177 1.7e-14 83.2 108 53.7
MD04G1140300 Malus domestica HOM05D000371 ORTHO05D006177 2.2e-14 82.8 106 50.0
Phvul.007G249700 Phaseolus vulgaris HOM05D000371 ORTHO05D006177 2.2e-14 82.8 107 50.5
Dinv35537 Davidia involucrata HOM05D000371 ORTHO05D006177 2.9e-14 82.4 107 48.6
CSS0030871 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D006177 3.7e-14 82.0 108 50.0
Prupe.6G265400 Prunus persica HOM05D000371 ORTHO05D006177 3.7e-14 82.0 106 50.9
GSVIVG01034052001 Vitis vinifera HOM05D000371 ORTHO05D006177 3.7e-14 82.0 103 52.4
PGR031G1276 Punica granatum HOM05D000371 ORTHO05D006177 4.9e-14 81.6 107 48.6
PSO384G0158 Papaver somniferum HOM05D000371 ORTHO05D006177 1.1e-13 80.5 107 51.4
Sed0006661 Sechium edule HOM05D000371 ORTHO05D006177 1.4e-13 80.1 108 51.9
CsaV3_4G025730 Cucumis sativus L. HOM05D000371 ORTHO05D006177 3.2e-13 79.0 109 49.5
Duzib093G0786 Durio zibethinus HOM05D000371 ORTHO05D006177 3.2e-13 79.0 110 50.0
Hma1.2p1_0671F.1_g200670 Hydrangea macrophylla HOM05D000371 ORTHO05D006177 3.2e-13 79.0 107 48.6
MD12G1155600 Malus domestica HOM05D000371 ORTHO05D006177 3.2e-13 79.0 106 48.1
Atru.chr8.2107 Acer truncatum HOM05D000371 ORTHO05D006177 4.1e-13 78.6 113 47.8
MELO3C003198.2 Cucumis melo HOM05D000371 ORTHO05D006177 4.1e-13 78.6 109 49.5
Ciclev10011305m.g Citrus clementina HOM05D000371 ORTHO05D006177 7.1e-13 77.8 108 46.3
PSO339G3206 Papaver somniferum HOM05D000371 ORTHO05D006177 1.2e-12 77.0 111 47.7
Gorai.006G178900 Gossypium raimondii HOM05D000371 ORTHO05D006177 1.6e-12 76.6 109 49.5
Gohir.A09G161700 Gossypium hirsutum HOM05D000371 ORTHO05D006177 2.1e-12 76.3 109 47.7
MSTRG.5620 Avicennia marina HOM05D000371 ORTHO05D006177 2.7e-12 75.9 106 44.3
Gohir.D09G157300 Gossypium hirsutum HOM05D000371 ORTHO05D006177 1.0e-11 73.9 109 48.6
HPP92_018046 Vanilla planifolia HOM05D000371 ORTHO05D006177 3.9e-11 72.0 111 44.1
Aqoxy1G00785 Aquilegia oxysepala HOM05D000371 ORTHO05D006177 5.1e-11 71.6 111 44.1
Migut.J00259 Erythranthe guttata HOM05D000371 ORTHO05D006177 1.1e-10 70.5 105 42.9
Zm00001eb017910 Zea mays HOM05D000371 ORTHO05D006177 2.5e-10 69.3 112 44.6
Zm00001eb394230 Zea mays HOM05D000371 ORTHO05D006177 2.5e-10 69.3 111 46.8
vmacro20202 Vaccinium macrocarpon HOM05D000371 ORTHO05D006177 3.3e-10 68.9 91 46.2
RcHm_v2.0_Chr3g0464491 Rosa chinensis HOM05D000371 ORTHO05D006177 7.3e-10 67.8 122 40.2
Lsat_1_v5_gn_8_80801 Lactuca sativa HOM05D000371 ORTHO05D006177 2.1e-09 66.2 108 44.4
Nitab4.5_0001650g0040 Nicotiana tabacum HOM05D000371 ORTHO05D006177 2.1e-09 66.2 110 46.4
Thecc.05G027800 Theobroma cacao HOM05D000371 ORTHO05D006177 2.1e-09 66.2 113 42.5
Nitab4.5_0006562g0050 Nicotiana tabacum HOM05D000371 ORTHO05D006177 2.8e-09 65.9 110 43.6
Actinidia13813 Actinidia chinensis HOM05D000371 ORTHO05D006177 3.6e-09 65.5 112 41.1
DCAR_028802 Daucus carota HOM05D000371 ORTHO05D006177 3.6e-09 65.5 118 45.8
ATR0210G001 Amborella trichopoda HOM05D000371 ORTHO05D006177 6.2e-09 64.7 114 42.1
CAN.G222.59 Capsicum annuum HOM05D000371 ORTHO05D006177 6.2e-09 64.7 108 42.6
FvH4_6g12640 Fragaria vesca HOM05D000371 ORTHO05D006177 1.1e-08 63.9 82 47.6
Sopen11g006220 Solanum pennellii HOM05D000371 ORTHO05D006177 1.4e-08 63.5 108 41.7
SalBow8G2887 Salvia bowleyana HOM05D000371 ORTHO05D006177 2.4e-08 62.8 106 39.6
ECA236G3449 Erigeron canadensis HOM05D000371 ORTHO05D006177 3.1e-08 62.4 105 43.8
CSS0040865 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D006177 4.0e-08 62.0 103 46.6
Solyc11g011420.3 Solanum lycopersicum HOM05D000371 ORTHO05D006177 4.0e-08 62.0 108 40.7
Os03g0367000 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D006177 5.2e-08 61.6 116 42.2
Cc00_g16740 Coffea canephora HOM05D000371 ORTHO05D006177 6.8e-08 61.2 106 41.5
Glyma.01G106600 Glycine max HOM05D000371 ORTHO05D006177 6.8e-08 61.2 86 47.7
Lj3C959T17 Lonicera japonica HOM05D000371 ORTHO05D006177 8.9e-08 60.8 111 40.5
Peaxi162Scf00562g00024 Petunia axillaris HOM05D000371 ORTHO05D006177 1.5e-07 60.1 110 40.9
HanXRQChr06g0176681 Helianthus annuus HOM05D000371 ORTHO05D006177 4.4e-07 58.5 110 42.7
Oeu030546.3 Olea europaea HOM05D000371 ORTHO05D006177 1.7e-06 56.6 107 38.3
Cpa.g.sc56.71 Carica papaya HOM05D000371 ORTHO05D006177 2.9e-06 55.8 80 50.0
unitig_26.g9094 Utricularia gibba HOM05D000371 ORTHO05D006177 2.9e-06 55.8 114 38.6
SEGI_00149 Sequoiadendron giganteum HOM05D000371 ORTHO05D006177 4.9e-06 55.1 111 39.6
Lalb_Chr07g0193201 Lupinus albus HOM05D000371 ORTHO05D006177 8.4e-06 54.3 87 44.8


User provided reference genes

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