Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.7e-73 279.3 143 100.0
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 2.1e-55 219.2 143 79.7
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 9.1e-51 203.8 160 69.4
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 5.7e-45 184.5 143 72.7
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 6.3e-44 181.0 144 68.1
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 1.8e-43 179.5 143 68.5
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 5.9e-42 174.5 143 69.9
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 3.8e-41 171.8 143 69.9
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 6.5e-41 171.0 144 66.0
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.1e-40 170.2 111 76.6
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 2.5e-40 169.1 118 75.4
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 3.3e-40 168.7 137 70.8
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.1e-39 166.0 143 65.7
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.8e-39 165.6 143 65.7
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 4.7e-39 164.9 149 63.1
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 4.7e-39 164.9 104 79.8
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 8.0e-39 164.1 105 79.0
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 8.0e-39 164.1 106 79.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.4e-38 163.3 94 88.3
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.4e-38 163.3 144 63.2
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.8e-38 162.9 140 64.3
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.8e-38 162.9 143 64.3
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.8e-38 162.9 140 62.9
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.8e-38 162.9 107 74.8
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 4.0e-38 161.8 94 84.0
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 4.0e-38 161.8 93 86.0
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.0e-38 161.8 94 87.2
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 5.2e-38 161.4 140 65.7
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 6.8e-38 161.0 107 77.6
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 6.8e-38 161.0 97 83.5
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 8.9e-38 160.6 95 86.3
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.2e-37 160.2 148 64.2
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 1.5e-37 159.8 143 65.7
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 2.0e-37 159.5 109 73.4
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 2.0e-37 159.5 94 81.9
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 2.6e-37 159.1 105 75.2
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.4e-37 158.7 142 63.4
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 4.4e-37 158.3 109 75.2
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 4.4e-37 158.3 143 60.8
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 5.7e-37 157.9 131 65.6
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 7.5e-37 157.5 93 87.1
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 9.8e-37 157.1 91 84.6
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.8e-37 157.1 100 79.0
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 1.7e-36 156.4 106 75.5
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 1.7e-36 156.4 142 63.4
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 2.2e-36 156.0 93 82.8
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 2.2e-36 156.0 100 78.0
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.2e-36 156.0 100 78.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 2.2e-36 156.0 143 62.2
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 2.2e-36 156.0 142 62.7
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.8e-36 155.6 92 82.6
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 2.8e-36 155.6 93 82.8
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 2.8e-36 155.6 86 89.5
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.8e-36 155.6 142 63.4
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 2.8e-36 155.6 98 81.6
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.7e-36 155.2 106 76.4
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.7e-36 155.2 94 86.2
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 4.9e-36 154.8 93 80.6
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 4.9e-36 154.8 93 80.6
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 6.3e-36 154.5 146 63.0
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 6.3e-36 154.5 144 62.5
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.1e-35 153.7 112 69.6
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.1e-35 153.7 112 69.6
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.4e-35 153.3 105 74.3
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 1.4e-35 153.3 126 65.1
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 1.4e-35 153.3 126 65.1
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 4.1e-35 151.8 107 74.8
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.4e-35 151.4 98 78.6
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 5.4e-35 151.4 92 80.4
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 9.2e-35 150.6 91 81.3
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 9.2e-35 150.6 93 81.7
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 1.2e-34 150.2 108 64.8
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 2.7e-34 149.1 143 60.1
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 3.5e-34 148.7 143 60.8
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.5e-34 148.7 84 82.1
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 5.9e-34 147.9 140 60.7
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 7.8e-34 147.5 143 60.8
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 7.8e-34 147.5 98 74.5
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 1.0e-33 147.1 106 69.8
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.3e-33 146.7 143 59.4
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.3e-33 146.7 143 62.2
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 1.3e-33 146.7 93 78.5
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 1.7e-33 146.4 138 59.4
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.3e-33 146.0 129 62.0
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.9e-33 145.6 87 82.8
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 2.9e-33 145.6 95 75.8
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 3.8e-33 145.2 93 75.3
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 3.8e-33 145.2 90 78.9
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 8.6e-33 144.1 82 84.1
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 1.1e-32 143.7 82 84.1
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 2.5e-32 142.5 119 65.5
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 2.5e-32 142.5 86 80.2
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.5e-32 142.5 83 84.3
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 3.3e-32 142.1 96 76.0
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 1.6e-31 139.8 131 58.8
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.1e-31 139.4 141 56.0
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.1e-31 139.4 84 77.4
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 2.8e-31 139.0 106 67.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.7e-31 138.3 84 81.0
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.8e-30 136.3 84 81.0
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 3.4e-29 132.1 89 71.9
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 3.5e-26 122.1 85 71.8
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 1.5e-24 116.7 146 52.1
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 3.9e-17 92.0 46 89.1
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.9e-16 89.7 111 50.5
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 9.2e-11 70.9 63 58.7
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 1.9e-08 63.2 86 48.8


User provided reference genes

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