Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.7e-64 249.6 172 100.0
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.6e-20 102.8 174 53.4
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.2e-19 99.8 175 44.6
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.8e-16 90.1 99 47.5
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.3e-15 85.9 94 50.0
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 5.7e-15 85.1 92 53.3
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 7.4e-15 84.7 91 49.5
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 9.7e-15 84.3 89 51.7
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-14 84.0 94 48.9
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.8e-14 82.8 89 52.8
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 3.7e-14 82.4 91 52.7
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 4.8e-14 82.0 85 54.1
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 8.2e-14 81.3 94 47.9
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.1e-13 80.9 89 50.6
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.1e-13 80.9 87 51.7
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-13 80.9 87 51.7
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-13 80.1 92 52.2
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.4e-13 79.7 80 51.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 4.1e-13 79.0 89 48.3
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.3e-13 78.6 79 50.6
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 9.1e-13 77.8 78 52.6
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.2e-12 77.4 84 51.2
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.5e-12 77.0 89 53.9
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 3.4e-12 75.9 88 47.7
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 1.7e-11 73.6 82 52.4
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 1.7e-11 73.6 83 45.8
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 2.2e-11 73.2 83 48.2
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 2.2e-11 73.2 178 46.1
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.9e-11 72.8 79 46.8
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 3.8e-11 72.4 83 45.8
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 5.0e-11 72.0 86 50.0
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 5.0e-11 72.0 82 51.2
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 6.5e-11 71.6 81 49.4
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 8.5e-11 71.2 94 45.7
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 1.1e-10 70.9 90 47.8
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.1e-10 70.9 83 47.0
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 1.1e-10 70.9 81 46.9
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.5e-10 69.7 74 50.0
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.5e-10 69.7 81 46.9
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 5.5e-10 68.6 78 46.2
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 5.5e-10 68.6 91 51.6
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 7.2e-10 68.2 83 44.6
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 7.2e-10 68.2 83 41.0
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 9.4e-10 67.8 89 48.3
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 9.4e-10 67.8 76 51.3
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.2e-09 67.4 81 43.2
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.2e-09 67.4 87 42.5
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.2e-09 67.4 88 46.6
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 1.6e-09 67.0 75 48.0
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 2.1e-09 66.6 106 41.5
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.1e-09 66.6 75 48.0
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.7e-09 66.2 89 44.9
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 3.6e-09 65.9 95 42.1
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 3.6e-09 65.9 87 42.5
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 3.6e-09 65.9 88 44.3
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.7e-09 65.5 91 47.3
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 8.0e-09 64.7 91 46.2
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 8.0e-09 64.7 91 46.2
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 8.0e-09 64.7 91 46.2
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 8.0e-09 64.7 82 42.7
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 1.0e-08 64.3 80 46.2
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 1.8e-08 63.5 89 41.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.8e-08 63.5 80 41.2
Prupe.6G254000 Prunus persica HOM05D005967 ORTHO05D005174 1.8e-08 63.5 92 42.4
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 3.0e-08 62.8 101 38.6
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 3.0e-08 62.8 82 46.3
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 3.0e-08 62.8 83 43.4
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 3.0e-08 62.8 78 50.0
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 3.9e-08 62.4 89 44.9
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 5.2e-08 62.0 95 41.1
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 8.8e-08 61.2 95 45.3
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 2.6e-07 59.7 88 43.2
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 2.6e-07 59.7 94 43.6
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 2.6e-07 59.7 99 41.4
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 2.6e-07 59.7 84 45.2
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.6e-07 59.7 86 44.2
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 3.3e-07 59.3 80 42.5
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 3.3e-07 59.3 68 45.6
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 4.4e-07 58.9 79 41.8
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 4.4e-07 58.9 98 41.8
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 5.7e-07 58.5 95 42.1
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 9.7e-07 57.8 88 43.2
PGR004G0898 Punica granatum HOM05D005967 ORTHO05D005174 1.3e-06 57.4 104 38.5
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 1.3e-06 57.4 81 39.5
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.2e-06 56.6 75 41.3
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.2e-06 56.6 91 44.0
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 2.2e-06 56.6 84 41.7
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 2.8e-06 56.2 90 43.3
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 2.8e-06 56.2 90 43.3
Sed0010435 Sechium edule HOM05D023073 ORTHO05D005174 2.8e-06 56.2 84 42.9
THA.LOC104827013 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 2.8e-06 56.2 85 41.2
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 3.7e-06 55.8 81 46.9
THA.LOC104823258 Tarenaya hassleriana HOM05D010528 ORTHO05D005174 3.7e-06 55.8 80 43.8
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 3.7e-06 55.8 65 46.2
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.8e-06 55.5 83 44.6
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 4.8e-06 55.5 83 44.6
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 6.3e-06 55.1 82 40.2
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 6.3e-06 55.1 102 40.2
Sp4g19970 Schrenkiella parvula HOM05D010751 ORTHO05D012745 6.3e-06 55.1 41 56.1
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 8.2e-06 54.7 80 36.2
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 8.2e-06 54.7 90 42.2
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 8.2e-06 54.7 79 40.5


User provided reference genes

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