Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 9.8e-172 606.7 300 100.0
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 3.0e-128 462.2 304 76.6
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.7e-115 419.9 304 72.0
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 4.9e-115 418.3 304 71.1
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 4.6e-113 411.8 303 71.3
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.0e-112 410.6 309 71.8
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 5.5e-106 388.3 310 68.7
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 3.0e-104 382.5 311 68.8
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 5.1e-104 381.7 309 67.6
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 3.3e-103 379.0 314 67.2
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 4.3e-103 378.6 306 68.6
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.5e-100 370.2 309 68.3
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 4.5e-100 368.6 308 66.6
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.0e-99 367.5 311 65.9
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.0e-99 367.5 310 68.1
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.7e-99 366.7 302 68.5
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 2.2e-99 366.3 315 65.7
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 2.2e-99 366.3 312 67.3
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 5.0e-99 365.2 302 68.5
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 1.9e-98 363.2 300 67.3
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 4.2e-98 362.1 307 67.1
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 5.5e-98 361.7 315 66.0
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 7.2e-98 361.3 296 66.6
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.2e-97 360.5 302 67.9
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.7e-97 359.4 307 64.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 1.4e-96 357.1 301 67.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.8e-96 356.7 296 66.6
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 8.8e-96 354.4 310 63.9
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.5e-95 353.6 296 66.2
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 4.3e-95 352.1 296 65.9
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 5.7e-95 351.7 312 64.7
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.3e-94 350.5 316 63.6
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.3e-94 350.5 317 64.0
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 8.2e-94 347.8 316 63.3
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.4e-93 347.1 305 63.3
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.8e-93 346.7 336 61.0
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 1.2e-92 344.0 316 62.7
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.0e-91 340.9 310 64.8
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.0e-91 340.9 327 61.2
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.9e-91 339.3 296 64.5
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.9e-91 339.3 296 64.5
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 6.5e-91 338.2 323 62.2
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 5.1e-88 328.6 330 57.9
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.5e-87 327.0 315 61.3
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 1.7e-86 323.6 292 62.7
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 2.8e-86 322.8 277 64.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 3.7e-86 322.4 279 62.0
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 5.9e-84 315.1 329 55.0
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 5.0e-83 312.0 316 58.2
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 3.2e-82 309.3 300 61.7
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 1.6e-81 307.0 295 60.0
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 2.7e-81 306.2 316 57.6
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 4.7e-81 305.4 315 58.7
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 8.0e-81 304.7 308 57.1
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 9.7e-79 297.7 303 55.8
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 1.3e-78 297.4 307 57.0
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 2.8e-78 296.2 302 56.0
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.8e-78 295.4 310 55.5
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 8.2e-78 294.7 299 60.5
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.1e-77 294.3 313 55.3
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.8e-77 293.5 312 55.1
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 2.4e-77 293.1 294 57.1
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.1e-77 292.4 310 54.8
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 4.1e-77 292.4 303 55.4
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 9.1e-77 291.2 311 57.2
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.2e-76 290.8 309 57.0
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.2e-76 290.8 303 56.8
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 4.5e-76 288.9 235 64.7
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.0e-75 287.7 305 58.0
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.3e-75 287.3 294 58.8
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.0e-75 285.4 306 55.9
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 2.5e-74 283.1 288 58.3
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 4.2e-74 282.3 281 58.7
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 6.1e-73 278.5 262 61.8
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 1.0e-72 277.7 359 49.0
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.4e-72 277.3 300 55.7
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.4e-72 277.3 291 60.5
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 6.8e-72 275.0 307 52.8
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 6.8e-72 275.0 367 49.3
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 6.8e-72 275.0 268 59.3
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 6.8e-72 275.0 307 54.4
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 8.8e-72 274.6 356 48.3
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.5e-71 273.9 314 53.8
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 3.4e-71 272.7 289 54.7
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 3.7e-70 269.2 288 55.6
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.1e-69 266.2 323 54.2
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 6.5e-67 258.5 403 42.9
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.0e-63 246.9 319 49.8
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 6.3e-62 241.9 211 63.0
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 9.2e-61 238.0 290 49.0
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.6e-57 227.3 129 86.0
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.2e-52 211.1 128 82.8
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 3.0e-51 206.5 277 45.1
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 3.9e-51 206.1 292 46.2
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 9.5e-50 201.4 109 85.3
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 2.3e-48 196.8 109 85.3
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 2.6e-47 193.4 111 82.9
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.7e-46 189.5 95 91.6
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 6.0e-44 182.2 120 72.5
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 1.0e-43 181.4 208 52.4
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.3e-42 176.4 98 84.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 4.7e-41 172.6 98 84.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.4e-40 171.0 169 52.7
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.7e-38 164.1 95 81.1
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 6.4e-38 162.2 92 83.7
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 1.6e-36 157.5 210 51.4
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.7e-35 154.1 124 59.7
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 2.0e-31 140.6 98 68.4
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 4.9e-30 136.0 207 45.9
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.3e-21 105.1 203 42.9
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 2.1e-20 104.0 108 56.5
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 2.1e-20 104.0 108 56.5
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 4.6e-20 102.8 108 57.4
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 4.6e-20 102.8 108 55.6
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.8e-20 102.1 195 39.5
CDE02G2228 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 2.5e-18 97.1 131 43.5
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.8e-17 92.8 196 38.8
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 3.1e-16 90.1 112 49.1
arahy.Tifrunner.gnm1.ann1.MM579M Arachis hypogaea HOM05D001890 ORTHO05D003442 5.3e-16 89.4 113 48.7
AUR62040983 Chenopodium quinoa HOM05D006626 ORTHO05D007352 4.5e-15 86.3 196 37.8
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 3.8e-14 83.2 43 86.0
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 8.4e-14 82.0 41 92.7
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.3e-10 69.7 45 68.9
Lsat_1_v5_gn_5_23780 Lactuca sativa HOM05D004869 ORTHO05D005893 3.8e-06 56.6 109 34.9
SEGI_28384 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 8.4e-06 55.5 112 40.2


User provided reference genes

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