Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 1.6e-113 412.9 225 100.0
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.2e-108 396.7 225 95.1
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 2.6e-108 395.6 224 93.3
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.7e-107 391.7 225 92.9
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 4.9e-107 391.3 225 91.1
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 6.3e-107 391.0 225 92.0
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 8.3e-107 390.6 225 91.1
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.1e-106 390.2 225 92.0
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 1.4e-106 389.8 225 90.2
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 1.8e-106 389.4 225 92.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.4e-106 389.0 225 93.3
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.4e-106 389.0 225 90.2
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.1e-106 388.3 225 90.2
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 9.1e-106 387.1 238 89.9
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 9.1e-106 387.1 225 91.6
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 9.1e-106 387.1 225 91.6
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.6e-105 386.3 225 89.3
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.6e-105 386.3 225 92.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 2.0e-105 386.0 225 92.4
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 4.5e-105 384.8 225 89.8
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 4.5e-105 384.8 225 90.2
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.9e-104 382.1 225 90.7
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 3.8e-104 381.7 225 90.2
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.0e-104 381.3 225 90.2
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 6.6e-104 380.9 225 89.8
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.1e-103 380.2 225 90.2
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 1.1e-103 380.2 225 92.0
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 1.5e-103 379.8 225 88.0
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.9e-103 379.4 225 89.3
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 1.9e-103 379.4 223 90.1
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 2.5e-103 379.0 225 90.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.5e-103 379.0 225 88.9
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 3.3e-103 378.6 225 88.4
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 3.3e-103 378.6 225 88.4
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 4.2e-103 378.3 225 88.0
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 4.2e-103 378.3 225 88.0
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 4.2e-103 378.3 225 88.4
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 4.2e-103 378.3 225 88.0
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 4.2e-103 378.3 225 89.3
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 5.6e-103 377.9 225 88.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 5.6e-103 377.9 225 88.0
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 7.2e-103 377.5 225 88.0
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 7.2e-103 377.5 222 89.6
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 9.5e-103 377.1 225 88.4
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 4.7e-102 374.8 225 87.1
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 8.0e-102 374.0 225 87.1
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 1.4e-101 373.2 222 88.7
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.4e-101 373.2 225 86.2
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.8e-101 372.9 223 86.1
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 1.8e-101 372.9 225 86.2
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 1.8e-101 372.9 223 89.7
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.8e-101 372.9 222 87.8
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 1.8e-101 372.9 225 86.7
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.3e-101 372.5 223 86.1
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.0e-101 372.1 223 85.7
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 3.0e-101 372.1 225 86.2
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 3.0e-101 372.1 225 86.7
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 4.0e-101 371.7 225 87.6
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 5.2e-101 371.3 225 86.2
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 5.2e-101 371.3 222 86.9
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.2e-100 370.2 225 85.3
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 1.5e-100 369.8 225 87.1
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.5e-100 369.8 223 85.7
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.5e-100 369.8 223 85.7
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 1.5e-100 369.8 223 86.5
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.5e-100 369.8 222 87.4
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 2.0e-100 369.4 222 86.5
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 2.6e-100 369.0 225 85.3
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 4.4e-100 368.2 223 87.9
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 4.4e-100 368.2 222 86.9
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 5.7e-100 367.9 220 89.5
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 7.5e-100 367.5 221 87.3
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 9.8e-100 367.1 225 86.2
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.3e-99 366.7 225 84.0
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 1.7e-99 366.3 225 84.4
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 2.9e-99 365.5 222 85.1
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 2.9e-99 365.5 225 88.9
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 4.9e-99 364.8 222 85.6
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 8.3e-99 364.0 222 86.5
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 8.3e-99 364.0 223 84.3
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.4e-98 363.2 222 84.7
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.8e-98 362.8 223 87.0
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 2.4e-98 362.5 225 85.3
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 2.4e-98 362.5 223 84.3
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 5.4e-98 361.3 223 86.5
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 7.0e-98 360.9 223 83.9
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 9.2e-98 360.5 225 81.8
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 9.2e-98 360.5 223 83.4
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 1.6e-97 359.8 223 83.4
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-97 359.8 221 84.6
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 1.6e-97 359.8 221 84.6
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.0e-96 357.1 225 82.2
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.3e-96 356.7 225 83.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.3e-96 356.7 223 85.7
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 1.7e-96 356.3 225 82.2
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 8.6e-96 354.0 222 82.4
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.9e-95 352.8 225 82.7
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 2.5e-95 352.4 223 83.0
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 7.3e-95 350.9 223 81.6
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 2.1e-94 349.4 247 79.4
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 1.0e-93 347.1 225 81.3
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 1.4e-93 346.7 225 81.8
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 4.4e-92 341.7 246 79.3
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.4e-90 335.9 225 76.4
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.8e-89 330.9 225 77.8
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 3.0e-88 328.9 209 84.2
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 5.0e-88 328.2 187 93.6
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 8.6e-88 327.4 223 75.8
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.5e-87 326.6 252 71.4
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 3.3e-87 325.5 225 75.6
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 9.5e-87 323.9 223 74.9
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.1e-86 322.8 198 85.9
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.0e-85 318.5 224 72.3
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 1.2e-84 317.0 225 78.2
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.3e-83 313.5 223 72.6
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 8.6e-80 300.8 225 69.8
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.3e-67 260.4 179 76.0
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.0e-64 250.8 152 88.2
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.8e-60 235.0 154 82.5
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-60 235.0 221 55.2
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.4e-50 203.8 121 87.6
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 7.1e-50 201.4 225 56.0
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 2.1e-46 189.9 225 44.9
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 6.0e-41 171.8 209 42.6
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.1e-37 159.5 208 42.3
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.9e-36 155.2 225 48.4
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 8.4e-35 151.4 98 76.5
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.4e-34 150.6 96 83.3
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.9e-32 142.5 77 96.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.1e-29 134.4 213 36.2
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.8e-29 133.7 75 92.0
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.5e-23 113.2 100 64.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 9.7e-23 111.3 98 62.2
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 6.9e-21 105.1 210 34.8
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 8.5e-11 71.6 75 58.7


User provided reference genes

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