Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G174500 Carya illinoinensis HOM05D009309 ORTHO05D011491 5.3e-24 113.6 61 100.0
Cfa017573 Carpinus fangiana HOM05D009309 ORTHO05D011491 1.1e-13 79.3 59 79.7
Potri.006G127000 Populus trichocarpa HOM05D009309 ORTHO05D011491 4.6e-12 73.9 47 85.1
CiPaw.09G172400 Carya illinoinensis HOM05D009309 ORTHO05D011491 1.4e-11 72.4 46 89.1
Manes.08G008300 Manihot esculenta HOM05D009309 ORTHO05D011491 1.1e-10 69.3 62 67.7
Ciclev10013303m.g Citrus clementina HOM05D009309 ORTHO05D011491 3.3e-10 67.8 57 73.7
Rhsim05G0179800 Rhododendron simsii HOM05D009309 ORTHO05D011491 7.4e-10 66.6 48 75.0
Thecc.05G062000 Theobroma cacao HOM05D009309 ORTHO05D011491 1.3e-09 65.9 63 65.1
Dinv37295 Davidia involucrata HOM05D009309 ORTHO05D011491 1.7e-09 65.5 56 67.9
MBI10_g22826_MAGBIO Magnolia biondii HOM05D009309 ORTHO05D011491 2.2e-09 65.1 62 59.7
MD12G1117300 Malus domestica HOM05D009309 ORTHO05D011491 3.7e-09 64.3 62 62.9
Prupe.6G235500 Prunus persica HOM05D009309 ORTHO05D011491 4.8e-09 63.9 62 62.9
Lj1g0009603 Lotus japonicus HOM05D009309 ORTHO05D011491 4.1e-08 60.8 49 67.3
MD04G1096300 Malus domestica HOM05D009309 ORTHO05D011491 1.2e-07 59.3 62 59.7
FAN02G2530 Fragaria x ananassa HOM05D009309 ORTHO05D011491 2.0e-07 58.5 59 62.7
FAN05G3556 Fragaria x ananassa HOM05D009309 ORTHO05D011491 4.5e-07 57.4 59 61.0
Glyma.19G182200 Glycine max HOM05D009309 ORTHO05D011491 5.9e-07 57.0 49 67.3
RcHm_v2.0_Chr3g0469801 Rosa chinensis HOM05D009309 ORTHO05D011491 5.9e-07 57.0 56 62.5
Glyma.03G181500 Glycine max HOM05D009309 ORTHO05D011491 1.0e-06 56.2 49 67.3
Migut.J00541 Erythranthe guttata HOM05D009309 ORTHO05D011491 1.3e-06 55.8 56 62.5
FAN09G1479 Fragaria x ananassa HOM05D009309 ORTHO05D011491 1.3e-06 55.8 59 61.0
SGA_v2.0_scaffold75G24863 Striga asiatica HOM05D001565 ORTHO05D001725 2.2e-06 55.1 53 62.3
HanXRQChr14g0454561 Helianthus annuus HOM05D009309 ORTHO05D011491 2.9e-06 54.7 54 55.6
Phvul.001G177600 Phaseolus vulgaris HOM05D009309 ORTHO05D011491 2.9e-06 54.7 49 63.3
Gohir.D09G144800 Gossypium hirsutum HOM05D009309 ORTHO05D011491 3.8e-06 54.3 65 53.8
Gorai.006G166100 Gossypium raimondii HOM05D009309 ORTHO05D011491 3.8e-06 54.3 65 53.8


User provided reference genes

Program Settings