Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 3.2e-58 228.0 100 100.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.7e-51 205.7 98 89.8
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 4.9e-51 204.1 98 88.8
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 2.4e-50 201.8 98 88.8
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 3.2e-50 201.4 98 87.8
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 3.2e-50 201.4 98 88.8
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 7.0e-50 200.3 100 87.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 7.0e-50 200.3 98 87.8
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 1.2e-49 199.5 98 86.7
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.6e-49 199.1 98 86.7
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 1.6e-49 199.1 98 86.7
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 1.6e-49 199.1 98 86.7
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.6e-49 199.1 98 86.7
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.7e-49 198.4 100 86.0
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 3.5e-49 198.0 100 84.0
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.5e-49 198.0 98 84.7
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 4.6e-49 197.6 98 85.7
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 4.6e-49 197.6 98 85.7
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 4.6e-49 197.6 98 85.7
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 7.8e-49 196.8 98 84.7
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 1.7e-48 195.7 98 84.7
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 2.3e-48 195.3 98 84.7
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 3.0e-48 194.9 98 84.7
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 5.1e-48 194.1 98 83.7
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 8.6e-48 193.4 98 81.6
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.5e-47 192.6 98 85.7
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 1.5e-47 192.6 98 82.7
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 5.6e-47 190.7 95 86.3
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 7.3e-47 190.3 98 82.7
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 1.6e-46 189.1 98 81.6
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 2.1e-46 188.7 98 81.6
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.6e-46 188.0 98 80.6
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 8.1e-46 186.8 98 82.7
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.4e-45 186.0 98 80.6
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 1.4e-45 186.0 98 80.6
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.4e-45 186.0 98 82.7
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 1.4e-45 186.0 98 80.6
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 1.8e-45 185.7 98 80.6
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 6.8e-45 183.7 98 77.6
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 6.8e-45 183.7 98 80.6
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 8.9e-45 183.3 98 77.6
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.5e-44 182.6 100 76.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.0e-44 182.2 100 75.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 2.0e-44 182.2 98 79.6
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 2.0e-44 182.2 98 78.6
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 2.6e-44 181.8 98 81.6
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.6e-44 181.8 98 77.6
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 4.4e-44 181.0 98 81.6
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 7.5e-44 180.3 98 80.6
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 9.9e-44 179.9 98 78.6
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 9.9e-44 179.9 98 75.5
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 9.9e-44 179.9 98 75.5
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 1.3e-43 179.5 98 80.6
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 1.3e-43 179.5 98 80.6
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.3e-43 179.5 98 77.6
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 1.7e-43 179.1 98 77.6
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 1.7e-43 179.1 98 76.5
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 79.6
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 76.5
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 76.5
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 2.2e-43 178.7 97 76.3
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 77.6
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 2.9e-43 178.3 88 88.6
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.4e-42 175.3 98 77.6
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 4.1e-42 174.5 98 77.6
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 4.1e-42 174.5 98 76.5
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 5.4e-42 174.1 98 73.5
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 9.2e-42 173.3 85 87.1
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 9.2e-42 173.3 98 74.5
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 7.8e-41 170.2 100 73.0
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 7.8e-41 170.2 98 70.4
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 1.0e-40 169.9 98 69.4
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 67.3
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 69.4
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 69.4
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 8.1e-38 160.2 132 56.8
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 1.1e-37 159.8 98 66.3
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.4e-37 159.5 98 72.4
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.4e-37 159.5 98 72.4
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 3.4e-36 154.8 99 66.7
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 5.4e-34 147.5 98 63.3
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 7.1e-34 147.1 86 74.4
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 9.2e-34 146.7 98 62.2
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 1.0e-32 143.3 99 63.6
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.3e-32 142.9 99 61.6
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 1.3e-30 136.3 168 42.9
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 1.3e-30 136.3 109 56.0
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.5e-28 129.4 70 78.6
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 7.1e-26 120.6 99 54.5
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 4.3e-23 111.3 99 50.5
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 8.1e-22 107.1 58 81.0
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 2.6e-20 102.1 100 50.0
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.1e-15 86.7 98 38.8
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.1e-13 78.6 38 84.2
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 9.0e-13 77.0 37 86.5
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.7e-11 72.8 31 96.8
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 1.5e-07 59.7 76 36.8
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 4.3e-07 58.2 76 34.2
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 5.7e-07 57.8 76 35.5


User provided reference genes

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