Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G172500 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.9e-56 222.2 108 100.0
QL07p043331 Quercus lobata HOM05D006702 ORTHO05D008540 1.0e-41 173.3 106 79.2
QL07p043496 Quercus lobata HOM05D006702 ORTHO05D008540 1.0e-41 173.3 106 79.2
CiPaw.10G130000 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.3e-41 172.9 106 80.2
CiPaw.10G130200 Carya illinoinensis HOM05D006702 ORTHO05D008540 1.3e-41 172.9 106 80.2
CANSAT80G0135 Cannabis sativa HOM05D006702 ORTHO05D008540 1.2e-39 166.4 108 73.1
Haze_20544 Corylus avellana HOM05D006702 ORTHO05D008540 2.7e-39 165.2 108 77.8
Manes.09G067614 Manihot esculenta HOM05D006702 ORTHO05D008540 4.6e-39 164.5 106 73.6
Haze_20547 Corylus avellana HOM05D006702 ORTHO05D008540 6.0e-39 164.1 108 76.9
Gohir.A04G072000 Gossypium hirsutum HOM05D006702 ORTHO05D008540 7.9e-39 163.7 108 72.2
TWI77G0937 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.0e-38 163.3 102 73.5
TWI53G0904 Tripterygium wilfordii HOM05D006702 ORTHO05D008540 1.8e-38 162.5 102 72.5
FvH4_6g16390 Fragaria vesca HOM05D006702 ORTHO05D008540 3.0e-38 161.8 108 72.2
FAN14G1896 Fragaria x ananassa HOM05D006702 ORTHO05D008540 3.0e-38 161.8 108 72.2
GSVIVG01025733001 Vitis vinifera HOM05D006702 ORTHO05D008540 3.0e-38 161.8 106 70.8
Gorai.009G414600 Gossypium raimondii HOM05D006702 ORTHO05D008540 5.1e-38 161.0 108 71.3
Nitab4.5_0008928g0010 Nicotiana tabacum HOM05D006702 ORTHO05D008540 5.1e-38 161.0 98 75.5
Psat6g074160 Pisum sativum HOM05D006702 ORTHO05D008540 5.1e-38 161.0 106 73.6
Thecc.05G066700 Theobroma cacao HOM05D006702 ORTHO05D008540 8.7e-38 160.2 102 74.5
Lalb_Chr06g0171741 Lupinus albus HOM05D006702 ORTHO05D008540 1.1e-37 159.8 94 79.8
Nitab4.5_0000578g0200 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.1e-37 159.8 98 74.5
Sopen09g002990 Solanum pennellii HOM05D006702 ORTHO05D008540 1.1e-37 159.8 99 74.7
PGSC0003DMG400003886 Solanum tuberosum HOM05D006702 ORTHO05D008540 1.1e-37 159.8 99 75.8
VMungo0720G0934 Vigna mungo HOM05D006702 ORTHO05D008540 1.5e-37 159.5 93 79.6
MSTRG.10321 Avicennia marina HOM05D006702 ORTHO05D008540 1.9e-37 159.1 93 77.4
Gorai.006G163300 Gossypium raimondii HOM05D006702 ORTHO05D008540 1.9e-37 159.1 102 72.5
Solyc09g008190.3 Solanum lycopersicum HOM05D006702 ORTHO05D008540 1.9e-37 159.1 98 75.5
SGA_v2.0_scaffold224G42945 Striga asiatica HOM05D006702 ORTHO05D008540 2.5e-37 158.7 99 74.7
Duzib106G0264 Durio zibethinus HOM05D006702 ORTHO05D008540 3.3e-37 158.3 102 74.5
Gohir.D09G142300 Gossypium hirsutum HOM05D006702 ORTHO05D008540 3.3e-37 158.3 102 71.6
Medtr1g063240 Medicago truncatula HOM05D006702 ORTHO05D008540 3.3e-37 158.3 105 74.3
Oeu045060.1 Olea europaea HOM05D006702 ORTHO05D008540 4.3e-37 157.9 102 75.5
Potri.016G093000 Populus trichocarpa HOM05D006702 ORTHO05D008540 7.4e-37 157.1 106 70.8
RcHm_v2.0_Chr3g0470251 Rosa chinensis HOM05D006702 ORTHO05D008540 7.4e-37 157.1 108 71.3
TPR.G11275 Trifolium pratense HOM05D006702 ORTHO05D008540 7.4e-37 157.1 105 74.3
Eucgr.K02933 Eucalyptus grandis HOM05D006702 ORTHO05D008540 1.3e-36 156.4 98 74.5
Gohir.A09G146600 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.3e-36 156.4 102 71.6
PGR142G4417 Punica granatum HOM05D006702 ORTHO05D008540 1.3e-36 156.4 98 74.5
Phvul.007G219250 Phaseolus vulgaris HOM05D006702 ORTHO05D008540 1.6e-36 156.0 93 78.5
FAN05G3937 Fragaria x ananassa HOM05D006702 ORTHO05D008540 2.2e-36 155.6 108 70.4
CAN.G900.34 Capsicum annuum HOM05D006702 ORTHO05D008540 2.8e-36 155.2 91 78.0
Glyma.13G142500 Glycine max HOM05D006702 ORTHO05D008540 4.8e-36 154.5 101 74.3
Sc02g0001610 Simmondsia chinensis HOM05D006702 ORTHO05D008540 8.2e-36 153.7 96 75.0
Lj5g0016847 Lotus japonicus HOM05D006702 ORTHO05D008540 1.1e-35 153.3 100 73.0
THA.LOC104823233 Tarenaya hassleriana HOM05D006702 ORTHO05D008540 1.1e-35 153.3 106 70.8
Actinidia32493 Actinidia chinensis HOM05D006702 ORTHO05D008540 1.4e-35 152.9 92 76.1
Duzib128G1950 Durio zibethinus HOM05D006702 ORTHO05D008540 1.4e-35 152.9 90 78.9
Lj2P122T8 Lonicera japonica HOM05D006702 ORTHO05D008540 1.4e-35 152.9 89 78.7
CSS0007009 Camellia sinensis var. sinensis HOM05D006702 ORTHO05D008540 1.8e-35 152.5 93 75.3
Gohir.D04G110501 Gossypium hirsutum HOM05D006702 ORTHO05D008540 1.8e-35 152.5 96 75.0
Cpa.g.sc54.80 Carica papaya HOM05D006702 ORTHO05D008540 2.4e-35 152.1 101 73.3
Ca_11502_v3 Cicer arietinum L. HOM05D006702 ORTHO05D008540 3.1e-35 151.8 105 71.4
Nn2g13794 Nelumbo nucifera HOM05D006702 ORTHO05D008540 3.1e-35 151.8 103 68.0
Nn2g13797 Nelumbo nucifera HOM05D006702 ORTHO05D008540 3.1e-35 151.8 103 68.0
Ciclev10012549m.g Citrus clementina HOM05D006702 ORTHO05D008540 4.1e-35 151.4 97 71.1
Cc06_g04220 Coffea canephora HOM05D006702 ORTHO05D008540 9.0e-35 150.2 92 77.2
MD04G1093600 Malus domestica HOM05D006702 ORTHO05D008540 9.0e-35 150.2 107 68.2
Prupe.6G232200 Prunus persica HOM05D006702 ORTHO05D008540 1.2e-34 149.8 110 65.5
ClCG04G009300 Citrullus lanatus HOM05D006702 ORTHO05D008540 1.5e-34 149.4 98 74.5
ATR0171G014 Amborella trichopoda HOM05D006702 ORTHO05D008540 7.6e-34 147.1 91 72.5
AT5G03370 Arabidopsis thaliana HOM05D006702 ORTHO05D008540 7.6e-34 147.1 106 67.0
BcaB01g05844 Brassica carinata HOM05D006702 ORTHO05D008540 7.6e-34 147.1 104 67.3
MELO3C024465.2 Cucumis melo HOM05D006702 ORTHO05D008540 7.6e-34 147.1 99 71.7
AL6G12700 Arabidopsis lyrata HOM05D006702 ORTHO05D008540 1.0e-33 146.7 106 67.0
AUR62040349 Chenopodium quinoa HOM05D006702 ORTHO05D008540 1.0e-33 146.7 89 76.4
Sabra16G0098200 Salix brachista HOM05D006702 ORTHO05D008540 1.0e-33 146.7 91 75.8
Sp6g39370 Schrenkiella parvula HOM05D006702 ORTHO05D008540 1.0e-33 146.7 93 72.0
BolC3t12702H Brassica oleracea HOM05D006702 ORTHO05D008540 1.3e-33 146.4 103 66.0
Aa31LG1G21770 Aethionema arabicum HOM05D006702 ORTHO05D008540 1.7e-33 146.0 106 65.1
C03p01460 Brassica napus HOM05D006702 ORTHO05D008540 1.7e-33 146.0 104 66.3
CsaV3_6G039890 Cucumis sativus L. HOM05D006702 ORTHO05D008540 1.7e-33 146.0 98 72.4
Carub.0006s0219 Capsella rubella HOM05D006702 ORTHO05D008540 2.9e-33 145.2 106 66.0
PSO339G3061 Papaver somniferum HOM05D006702 ORTHO05D008540 2.9e-33 145.2 93 71.0
Migut.L01703 Erythranthe guttata HOM05D006702 ORTHO05D008540 5.0e-33 144.4 94 70.2
Sed0024166 Sechium edule HOM05D006702 ORTHO05D008540 5.0e-33 144.4 95 71.6
TAR369G0293 Trochodendron aralioides HOM05D006702 ORTHO05D008540 8.5e-33 143.7 89 74.2
BraA03t09496Z Brassica rapa HOM05D006702 ORTHO05D008540 1.1e-32 143.3 91 70.3
Thhalv10003274m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.1e-32 143.3 93 71.0
ECA233G1636 Erigeron canadensis HOM05D006702 ORTHO05D008540 1.4e-32 142.9 97 67.0
EL10Ac7g16628 Beta vulgaris HOM05D006702 ORTHO05D008540 2.5e-32 142.1 95 70.5
A03p01140 Brassica napus HOM05D000070 ORTHO05D001255 4.2e-32 141.4 91 69.2
CARHR209960 Cardamine hirsuta HOM05D006702 ORTHO05D008540 5.5e-32 141.0 106 64.2
AUR62042500 Chenopodium quinoa HOM05D006702 ORTHO05D008540 9.3e-32 140.2 90 72.2
Thhalv10014711m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 6.1e-31 137.5 89 68.5
CDE05G1201 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.4e-30 136.3 91 71.4
Thhalv10029095m.g Eutrema salsugineum HOM05D006702 ORTHO05D008540 1.8e-30 136.0 89 68.5
Lalb_Chr24g0398871 Lupinus albus HOM05D006702 ORTHO05D008540 5.1e-30 134.4 98 63.3
DCAR_014995 Daucus carota HOM05D006702 ORTHO05D008540 1.1e-29 133.3 91 67.0
Aqoxy2G01772 Aquilegia oxysepala HOM05D006702 ORTHO05D008540 1.5e-29 132.9 94 70.2
DCAR_020817 Daucus carota HOM05D006702 ORTHO05D008540 1.5e-29 132.9 101 62.4
Atru.chr8.1809 Acer truncatum HOM05D006702 ORTHO05D008540 1.7e-28 129.4 82 75.6
CARHR118060 Cardamine hirsuta HOM05D006702 ORTHO05D008540 1.4e-27 126.3 89 65.2
SEGI_37807 Sequoiadendron giganteum HOM05D006702 ORTHO05D008540 4.1e-27 124.8 95 60.0
Nitab4.5_0008928g0020 Nicotiana tabacum HOM05D006702 ORTHO05D008540 1.2e-26 123.2 99 61.6
Hma1.2p1_0205F.1_g087030 Hydrangea macrophylla HOM05D006702 ORTHO05D008540 2.6e-26 122.1 79 72.2
arahy.Tifrunner.gnm1.ann1.C2LQEN Arachis hypogaea HOM05D006702 ORTHO05D008540 4.5e-26 121.3 79 73.4
arahy.Tifrunner.gnm1.ann1.NQ6TBI Arachis hypogaea HOM05D006702 ORTHO05D008540 4.5e-26 121.3 79 73.4
CAN.G900.33 Capsicum annuum HOM05D006702 ORTHO05D008540 1.0e-25 120.2 91 62.6
Potri.006G124966 Populus trichocarpa HOM05D006702 ORTHO05D008540 2.5e-24 115.5 94 61.7
Hund25533 Selenicereus undatus HOM05D006702 ORTHO05D008540 9.4e-24 113.6 71 73.2
unitig_0.g683 Utricularia gibba HOM05D006702 ORTHO05D008540 1.6e-23 112.8 71 73.2
AagrBONN_evm.TU.Sc2ySwM_368.2290 Anthoceros agrestis HOM05D006702 ORTHO05D008540 6.1e-23 110.9 96 53.1
Peaxi162Scf01139g00005 Petunia axillaris HOM05D006702 ORTHO05D008540 7.9e-23 110.5 93 58.1
Mapoly0013s0202 Marchantia polymorpha HOM05D006702 ORTHO05D008540 1.8e-22 109.4 92 53.3
Pp3c18_4750 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.8e-22 109.4 95 55.8
Lsat_1_v5_gn_6_25081 Lactuca sativa HOM05D006702 ORTHO05D008540 8.8e-22 107.1 104 51.0
SMO137G0384 Selaginella moellendorffii HOM05D006702 ORTHO05D008540 4.4e-21 104.8 87 56.3
AagrBONN_evm.TU.Sc2ySwM_362.139 Anthoceros agrestis HOM05D006702 ORTHO05D008540 2.8e-20 102.1 91 50.5
Os06g0264700 Oryza sativa ssp. japonica HOM05D006702 ORTHO05D008540 1.8e-19 99.4 105 52.4
Zm00001eb380050 Zea mays HOM05D006702 ORTHO05D008540 1.5e-18 96.3 112 50.0
Zm00001eb380040 Zea mays HOM05D006702 ORTHO05D008540 1.1e-16 90.1 99 50.5
Pp3c1_15300 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.4e-16 89.7 86 48.8
Pp3c5_16270 Physcomitrium patens HOM05D006702 ORTHO05D008540 1.7e-12 76.3 89 38.2
MSTRG.19178 Avicennia marina HOM05D006702 ORTHO05D008540 1.8e-11 72.8 56 58.9
CDE05G1088 Ceratophyllum demersum HOM05D006702 ORTHO05D008540 1.3e-09 66.6 40 77.5
FAN02G1423 Fragaria x ananassa HOM05D006702 ORTHO05D008540 5.5e-08 61.2 48 62.5
FAN05G1090 Fragaria x ananassa HOM05D006702 ORTHO05D008540 5.5e-08 61.2 48 62.5
Sabra06G0098700 Salix brachista HOM05D000002 ORTHO05D000047 1.4e-06 56.6 50 58.0


User provided reference genes

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