Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CiPaw.09G165100 Carya illinoinensis HOM05D000881 ORTHO05D000666 2.1e-76 288.9 139 100.0
Cfa017684 Carpinus fangiana HOM05D000881 ORTHO05D000666 6.4e-17 91.3 120 40.8
Haze_20463 Corylus avellana HOM05D019023 ORTHO05D000666 1.6e-15 86.7 119 38.7
Cpa.g.sc161.5 Carica papaya HOM05D000881 ORTHO05D000666 9.6e-13 77.4 91 44.0
TWI60G0863 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 8.1e-12 74.3 93 40.9
QL10p034472 Quercus lobata HOM05D000881 ORTHO05D000666 1.1e-11 73.9 96 39.6
Sabra19G0049000 Salix brachista HOM05D000881 ORTHO05D000666 2.4e-11 72.8 99 40.4
Dinv11927 Davidia involucrata HOM05D000881 ORTHO05D000666 3.1e-11 72.4 99 37.4
Ciclev10022272m.g Citrus clementina HOM05D000881 ORTHO05D000666 4.0e-11 72.0 98 40.8
Atru.chr2.1411 Acer truncatum HOM05D000881 ORTHO05D000666 6.9e-11 71.2 100 40.0
Oeu044647.1 Olea europaea HOM05D000881 ORTHO05D000666 7.6e-10 67.8 100 37.0
THA.LOC104800241 Tarenaya hassleriana HOM05D000881 ORTHO05D000666 7.6e-10 67.8 99 40.4
Lalb_Chr14g0370271 Lupinus albus HOM05D000881 ORTHO05D000666 9.9e-10 67.4 110 32.7
THA.LOC104805773 Tarenaya hassleriana HOM05D000881 ORTHO05D000666 1.3e-09 67.0 99 40.4
RcHm_v2.0_Chr7g0177251 Rosa chinensis HOM05D000881 ORTHO05D000666 1.7e-09 66.6 98 32.7
FvH4_5g18340 Fragaria vesca HOM05D000881 ORTHO05D000666 3.8e-09 65.5 96 34.4
FAN18G3122 Fragaria x ananassa HOM05D000881 ORTHO05D000666 3.8e-09 65.5 96 34.4
Prupe.7G008500 Prunus persica HOM05D000881 ORTHO05D000666 3.8e-09 65.5 143 30.1
FAN04G1642 Fragaria x ananassa HOM05D000881 ORTHO05D000666 4.9e-09 65.1 96 34.4
Glyma.09G165300 Glycine max HOM05D000881 ORTHO05D000666 4.9e-09 65.1 146 32.2
DCAR_009079 Daucus carota HOM05D000881 ORTHO05D000666 6.4e-09 64.7 93 36.6
FAN08G3596 Fragaria x ananassa HOM05D000881 ORTHO05D000666 6.4e-09 64.7 91 34.1
Potri.013G054900 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.4e-08 63.5 91 36.3
Thecc.05G246200 Theobroma cacao HOM05D000881 ORTHO05D000666 1.4e-08 63.5 98 34.7
Actinidia37794 Actinidia chinensis HOM05D000881 ORTHO05D000666 1.9e-08 63.2 97 37.1
CANSAT64G1865 Cannabis sativa HOM05D000881 ORTHO05D000666 1.9e-08 63.2 94 30.9
COL.COLO4_32968 Corchorus olitorius HOM05D000881 ORTHO05D000666 1.9e-08 63.2 114 33.3
Oeu027605.1 Olea europaea HOM05D000881 ORTHO05D000666 2.4e-08 62.8 97 36.1
Phvul.004G140900 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 2.4e-08 62.8 138 30.4
Potri.019G037700 Populus trichocarpa HOM05D000881 ORTHO05D000666 2.4e-08 62.8 106 35.8
Lsat_1_v5_gn_1_56241 Lactuca sativa HOM05D000881 ORTHO05D000666 3.2e-08 62.4 91 38.5
AT1G54400 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 4.2e-08 62.0 100 38.0
Cfa017687 Carpinus fangiana HOM05D000881 ORTHO05D000666 4.2e-08 62.0 138 30.4
Rhsim03G0053400 Rhododendron simsii HOM05D000881 ORTHO05D000666 4.2e-08 62.0 94 36.2
CARHR055530 Cardamine hirsuta HOM05D000881 ORTHO05D000666 5.4e-08 61.6 96 36.5
Cc06_g07270 Coffea canephora HOM05D000881 ORTHO05D000666 5.4e-08 61.6 96 37.5
PGR042G3352 Punica granatum HOM05D000881 ORTHO05D000666 5.4e-08 61.6 92 35.9
BcaC01g06208 Brassica carinata HOM05D000881 ORTHO05D000666 7.1e-08 61.2 99 37.4
A03p15510 Brassica napus HOM05D000881 ORTHO05D000666 7.1e-08 61.2 99 37.4
C03p18100 Brassica napus HOM05D000881 ORTHO05D000666 7.1e-08 61.2 99 37.4
BolC3t14213H Brassica oleracea HOM05D000881 ORTHO05D000666 7.1e-08 61.2 99 37.4
BraA03t10844Z Brassica rapa HOM05D000881 ORTHO05D000666 7.1e-08 61.2 99 37.4
arahy.Tifrunner.gnm1.ann1.J1HUHD Arachis hypogaea HOM05D000881 ORTHO05D000666 9.3e-08 60.8 91 34.1
arahy.Tifrunner.gnm1.ann1.Y8A2Y7 Arachis hypogaea HOM05D000881 ORTHO05D000666 9.3e-08 60.8 134 29.1
MD12G1007600 Malus domestica HOM05D000881 ORTHO05D000666 9.3e-08 60.8 102 33.3
SpUn0001_0960 Schrenkiella parvula HOM05D000881 ORTHO05D000666 1.2e-07 60.5 94 37.2
BcaB01g04224 Brassica carinata HOM05D000881 ORTHO05D000666 1.6e-07 60.1 99 36.4
Gohir.D11G243900 Gossypium hirsutum HOM05D000881 ORTHO05D000666 1.6e-07 60.1 93 34.4
BcaC06g31769 Brassica carinata HOM05D000881 ORTHO05D000666 2.1e-07 59.7 94 36.2
Thhalv10023940m.g Eutrema salsugineum HOM05D000881 ORTHO05D000666 2.1e-07 59.7 97 37.1
CANSAT78G0213 Cannabis sativa HOM05D000881 ORTHO05D000666 2.7e-07 59.3 146 26.7
Carub.0002s0956 Capsella rubella HOM05D000881 ORTHO05D000666 2.7e-07 59.3 100 35.0
HanXRQChr01g0026391 Helianthus annuus HOM05D000881 ORTHO05D000666 2.7e-07 59.3 90 34.4
CANSAT78G1545 Cannabis sativa HOM05D000881 ORTHO05D000666 3.5e-07 58.9 96 35.4
Aa31LG2G1880 Aethionema arabicum HOM05D000881 ORTHO05D000666 6.0e-07 58.2 95 33.7
Gohir.A11G232700 Gossypium hirsutum HOM05D000881 ORTHO05D000666 6.0e-07 58.2 93 34.4
Gorai.007G259400 Gossypium raimondii HOM05D000881 ORTHO05D000666 6.0e-07 58.2 93 34.4
Psat3g087960 Pisum sativum HOM05D000881 ORTHO05D000666 6.0e-07 58.2 96 36.5
MSTRG.10426 Avicennia marina HOM05D000881 ORTHO05D000666 7.9e-07 57.8 115 33.9
Cfa017677 Carpinus fangiana HOM05D000881 ORTHO05D000666 7.9e-07 57.8 89 40.4
Rhsim03G0053300 Rhododendron simsii HOM05D000881 ORTHO05D000666 7.9e-07 57.8 94 36.2
AL1G64700 Arabidopsis lyrata HOM05D000881 ORTHO05D000666 1.0e-06 57.4 96 36.5
EL10Ac4g08752 Beta vulgaris HOM05D000881 ORTHO05D000666 1.0e-06 57.4 91 35.2
Haze_03560 Corylus avellana HOM05D021788 ORTHO05D000666 1.0e-06 57.4 139 27.3
Cc00_g20150 Coffea canephora HOM05D000881 ORTHO05D000666 1.3e-06 57.0 102 31.4
Actinidia37795 Actinidia chinensis HOM05D000881 ORTHO05D000666 1.7e-06 56.6 92 35.9
Rhsim03G0053700 Rhododendron simsii HOM05D000881 ORTHO05D000666 1.7e-06 56.6 94 35.1
AUR62034145 Chenopodium quinoa HOM05D000881 ORTHO05D000666 2.3e-06 56.2 97 34.0
Sabra13G0049100 Salix brachista HOM05D000881 ORTHO05D000666 2.3e-06 56.2 98 32.7
Sabra13G0049200 Salix brachista HOM05D000881 ORTHO05D000666 2.3e-06 56.2 98 32.7
Sabra13G0049300 Salix brachista HOM05D000881 ORTHO05D000666 2.3e-06 56.2 98 32.7
Hund06059 Selenicereus undatus HOM05D000881 ORTHO05D000666 2.3e-06 56.2 92 32.6
Sc01g0005070 Simmondsia chinensis HOM05D000881 ORTHO05D000666 2.3e-06 56.2 91 31.9
Sopen10g028570 Solanum pennellii HOM05D000881 ORTHO05D000666 2.3e-06 56.2 102 28.4
HanXRQChr11g0347921 Helianthus annuus HOM05D000881 ORTHO05D000666 3.0e-06 55.8 93 36.6
Actinidia03943 Actinidia chinensis HOM05D000881 ORTHO05D000666 3.9e-06 55.5 92 37.0
AUR62014290 Chenopodium quinoa HOM05D000881 ORTHO05D000666 3.9e-06 55.5 93 34.4
Lalb_Chr14g0364621 Lupinus albus HOM05D000881 ORTHO05D000666 3.9e-06 55.5 91 29.7
Nitab4.5_0002131g0030 Nicotiana tabacum HOM05D000881 ORTHO05D000666 3.9e-06 55.5 108 34.3
Rhsim03G0053200 Rhododendron simsii HOM05D000881 ORTHO05D000666 5.1e-06 55.1 94 35.1
HanXRQChr16g0516881 Helianthus annuus HOM05D000881 ORTHO05D000666 8.7e-06 54.3 99 31.3


User provided reference genes

Program Settings